RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 NAPRTQ6XQN6 538 aa5.21□□□□□ -1.58
SMCHD1-208ENST00000583344 ZNF804AQ7Z570 1209 aa5.21□□□□□ -1.58
SMCHD1-208ENST00000583344 DDX17Q92841 729 aaKnown RBP5.21□□□□□ -1.58
SMCHD1-208ENST00000583344 ZBTB9Q96C00 473 aa5.21□□□□□ -1.58
SMCHD1-208ENST00000583344 ASPSCR1Q9BZE9 553 aa5.21□□□□□ -1.58
SMCHD1-208ENST00000583344 BHMT2Q9H2M3 363 aa5.21□□□□□ -1.58
SMCHD1-208ENST00000583344 KIF21BO75037 1637 aa5.21□□□□□ -1.58
SMCHD1-208ENST00000583344 RUSC2Q8N2Y8 1516 aa5.21□□□□□ -1.58
SMCHD1-208ENST00000583344 ZNF521Q96K83 1311 aa5.21□□□□□ -1.58
SMCHD1-208ENST00000583344 CUX2O14529 1486 aa5.2□□□□□ -1.58
SMCHD1-208ENST00000583344 ERCC6Q03468 1493 aa5.2□□□□□ -1.58
SMCHD1-208ENST00000583344 BAZ1BQ9UIG0 1483 aaKnown RBP5.2□□□□□ -1.58
SMCHD1-208ENST00000583344 CEP164Q9UPV0 1460 aa5.2□□□□□ -1.58
SMCHD1-208ENST00000583344 SBNO2Q9Y2G9 1366 aa5.2□□□□□ -1.58
SMCHD1-208ENST00000583344 PPP6CO00743 305 aa5.2□□□□□ -1.58
SMCHD1-208ENST00000583344 TLR5O60602 858 aa5.2□□□□□ -1.58
SMCHD1-208ENST00000583344 DNAJB5O75953 348 aa5.2□□□□□ -1.58
SMCHD1-208ENST00000583344 FESP07332 822 aa5.2□□□□□ -1.58
SMCHD1-208ENST00000583344 HDCP19113 662 aa5.2□□□□□ -1.58
SMCHD1-208ENST00000583344 PTGER1P34995 402 aa5.2□□□□□ -1.58
SMCHD1-208ENST00000583344 LILRA4P59901 499 aa5.2□□□□□ -1.58
SMCHD1-208ENST00000583344 LONRF3Q496Y0 759 aa5.2□□□□□ -1.58
SMCHD1-208ENST00000583344 ARHGAP40Q5TG30 622 aa5.2□□□□□ -1.58
SMCHD1-208ENST00000583344 USP45Q70EL2 814 aa5.2□□□□□ -1.58
SMCHD1-208ENST00000583344 PRR18Q8N4B5 295 aa5.2□□□□□ -1.58
SMCHD1-208ENST00000583344 LRRC71Q8N4P6 559 aa5.2□□□□□ -1.58
SMCHD1-208ENST00000583344 CELF5Q8N6W0 485 aaKnown RBP5.2□□□□□ -1.58
SMCHD1-208ENST00000583344 ATG4AQ8WYN0 398 aa5.2□□□□□ -1.58
SMCHD1-208ENST00000583344 FCRL4Q96PJ5 515 aa5.2□□□□□ -1.58
SMCHD1-208ENST00000583344 NELL2Q99435 816 aa5.2□□□□□ -1.58
SMCHD1-208ENST00000583344 DUSP22Q9NRW4 184 aa5.2□□□□□ -1.58
SMCHD1-208ENST00000583344 SSX2IPQ9Y2D8 614 aa5.2□□□□□ -1.58
SMCHD1-208ENST00000583344 WASHC2CQ9Y4E1 1318 aa5.2□□□□□ -1.58
SMCHD1-208ENST00000583344 ALG1L2C9J202 215 aa5.19□□□□□ -1.58
SMCHD1-208ENST00000583344 PRRT4C9JH25 899 aa5.19□□□□□ -1.58
SMCHD1-208ENST00000583344 UNC5CO95185 931 aa5.19□□□□□ -1.58
SMCHD1-208ENST00000583344 IGKV2-30P06310 120 aa5.19□□□□□ -1.58
SMCHD1-208ENST00000583344 SFPQP23246 707 aaKnown RBP eCLIP5.19□□□□□ -1.58
SMCHD1-208ENST00000583344 RECQLP46063 649 aaPredicted RBP5.19□□□□□ -1.58
SMCHD1-208ENST00000583344 PDE1AP54750 535 aa5.19□□□□□ -1.58
SMCHD1-208ENST00000583344 LOXL3P58215 753 aa5.19□□□□□ -1.58
SMCHD1-208ENST00000583344 MAPK7Q13164 816 aa5.19□□□□□ -1.58
SMCHD1-208ENST00000583344 SFRP4Q6FHJ7 346 aaPredicted RBP5.19□□□□□ -1.58
SMCHD1-208ENST00000583344 LAYNQ6UX15 382 aa5.19□□□□□ -1.58
SMCHD1-208ENST00000583344 WDR53Q7Z5U6 358 aaPredicted RBP5.19□□□□□ -1.58
SMCHD1-208ENST00000583344 CAMKK2Q96RR4 588 aa5.19□□□□□ -1.58
SMCHD1-208ENST00000583344 PNPOQ9NVS9 261 aa5.19□□□□□ -1.58
SMCHD1-208ENST00000583344 VPS8Q8N3P4 1428 aa5.18□□□□□ -1.58
SMCHD1-208ENST00000583344 MOSPD3O75425 235 aa5.18□□□□□ -1.58
SMCHD1-208ENST00000583344 SNUPNO95149 360 aaKnown RBP5.18□□□□□ -1.58
SMCHD1-208ENST00000583344 BMP15O95972 392 aa5.18□□□□□ -1.58
SMCHD1-208ENST00000583344 ATXN1LP0C7T5 689 aaKnown RBP5.18□□□□□ -1.58
SMCHD1-208ENST00000583344 CTGFP29279 349 aa5.18□□□□□ -1.58
SMCHD1-208ENST00000583344 ARHGAP25P42331 645 aa5.18□□□□□ -1.58
SMCHD1-208ENST00000583344 PXNP49023 591 aaPredicted RBP5.18□□□□□ -1.58
SMCHD1-208ENST00000583344 SOX8P57073 446 aa5.18□□□□□ -1.58
SMCHD1-208ENST00000583344 PLS1Q14651 629 aa5.18□□□□□ -1.58
SMCHD1-208ENST00000583344 SLC9A4Q6AI14 798 aa5.18□□□□□ -1.58
SMCHD1-208ENST00000583344 RGS7BPQ6MZT1 257 aaPredicted RBP5.18□□□□□ -1.58
SMCHD1-208ENST00000583344 CHSY1Q86X52 802 aa5.18□□□□□ -1.58
SMCHD1-208ENST00000583344 PNLDC1Q8NA58 520 aaKnown RBP5.18□□□□□ -1.58
SMCHD1-208ENST00000583344 CYP2W1Q8TAV3 490 aa5.18□□□□□ -1.58
SMCHD1-208ENST00000583344 BRIX1Q8TDN6 353 aaKnown RBP5.18□□□□□ -1.58
SMCHD1-208ENST00000583344 DENND1AQ8TEH3 1009 aa5.18□□□□□ -1.58
SMCHD1-208ENST00000583344 GLG1Q92896 1179 aa5.18□□□□□ -1.58
SMCHD1-208ENST00000583344 R3HDM4Q96D70 268 aa5.18□□□□□ -1.58
SMCHD1-208ENST00000583344 FSD1LQ9BXM9 530 aa5.18□□□□□ -1.58
SMCHD1-208ENST00000583344 GTPBP4Q9BZE4 634 aaKnown RBP5.18□□□□□ -1.58
SMCHD1-208ENST00000583344 PDGFCQ9NRA1 345 aa5.18□□□□□ -1.58
SMCHD1-208ENST00000583344 ADAMTS5Q9UNA0 930 aa5.18□□□□□ -1.58
SMCHD1-208ENST00000583344 TBC1D30Q9Y2I9 924 aa5.18□□□□□ -1.58
SMCHD1-208ENST00000583344 CLIP1P30622 1438 aa5.17□□□□□ -1.58
SMCHD1-208ENST00000583344 H3BUI4 141 aa5.17□□□□□ -1.58
SMCHD1-208ENST00000583344 MYO1FO00160 1098 aa5.17□□□□□ -1.58
SMCHD1-208ENST00000583344 IL33O95760 270 aa5.17□□□□□ -1.58
SMCHD1-208ENST00000583344 ONECUT2O95948 504 aa5.17□□□□□ -1.58
SMCHD1-208ENST00000583344 TUBB4AP04350 444 aa5.17□□□□□ -1.58
SMCHD1-208ENST00000583344 POU2F2P09086 479 aa5.17□□□□□ -1.58
SMCHD1-208ENST00000583344 PPIFP30405 207 aaKnown RBP5.17□□□□□ -1.58
SMCHD1-208ENST00000583344 IQCB1Q15051 598 aa5.17□□□□□ -1.58
SMCHD1-208ENST00000583344 PGS1Q32NB8 556 aa5.17□□□□□ -1.58
SMCHD1-208ENST00000583344 CCDC157Q569K6 752 aa5.17□□□□□ -1.58
SMCHD1-208ENST00000583344 SLC35A4Q96G79 324 aa5.17□□□□□ -1.58
SMCHD1-208ENST00000583344 FAM167AQ96KS9 214 aa5.17□□□□□ -1.58
SMCHD1-208ENST00000583344 C5orf34Q96MH7 638 aa5.17□□□□□ -1.58
SMCHD1-208ENST00000583344 PTDSS2Q9BVG9 487 aa5.17□□□□□ -1.58
SMCHD1-208ENST00000583344 SPRTNQ9H040 489 aaPredicted RBP5.17□□□□□ -1.58
SMCHD1-208ENST00000583344 GLOD4Q9HC38 313 aa5.17□□□□□ -1.58
SMCHD1-208ENST00000583344 PCDHA6Q9UN73 950 aa5.17□□□□□ -1.58
SMCHD1-208ENST00000583344 SH2B3Q9UQQ2 575 aa5.17□□□□□ -1.58
SMCHD1-208ENST00000583344 SMIM35A0A1B0GVV1 85 aa5.16□□□□□ -1.58
SMCHD1-208ENST00000583344 A1L4Q6 167 aa5.16□□□□□ -1.58
SMCHD1-208ENST00000583344 KCNU1A8MYU2 1149 aa5.16□□□□□ -1.58
SMCHD1-208ENST00000583344 ADAMTS3O15072 1205 aa5.16□□□□□ -1.58
SMCHD1-208ENST00000583344 PPM1GO15355 546 aaPredicted RBP5.16□□□□□ -1.58
SMCHD1-208ENST00000583344 PDE8BO95263 885 aa5.16□□□□□ -1.58
SMCHD1-208ENST00000583344 TOP3BO95985 862 aaKnown RBP5.16□□□□□ -1.58
SMCHD1-208ENST00000583344 GRPP07492 148 aa5.16□□□□□ -1.58
SMCHD1-208ENST00000583344 NPSP0C0P6 89 aa5.16□□□□□ -1.58
SMCHD1-208ENST00000583344 NKX6-1P78426 367 aaPredicted RBP5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms