RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 TRAV19A0A0A6YYK7 116 aa13.25□□□□□ -0.29
TOP3A-215ENST00000583328 A0A0B4J269 797 aa13.25□□□□□ -0.29
TOP3A-215ENST00000583328 MAP3K13O43283 966 aa13.25□□□□□ -0.29
TOP3A-215ENST00000583328 PIGRP01833 764 aa13.25□□□□□ -0.29
TOP3A-215ENST00000583328 USP17L7P0C7H9 530 aa13.25□□□□□ -0.29
TOP3A-215ENST00000583328 PRPHP41219 470 aa13.25□□□□□ -0.29
TOP3A-215ENST00000583328 MAPK8P45983 427 aa13.25□□□□□ -0.29
TOP3A-215ENST00000583328 TOB1P50616 345 aaPredicted RBP13.25□□□□□ -0.29
TOP3A-215ENST00000583328 SLC12A3P55017 1021 aa13.25□□□□□ -0.29
TOP3A-215ENST00000583328 TSPY1Q01534 308 aa13.25□□□□□ -0.29
TOP3A-215ENST00000583328 ZNF77Q15935 545 aa13.25□□□□□ -0.29
TOP3A-215ENST00000583328 NFE2Q16621 373 aaPredicted RBP13.25□□□□□ -0.29
TOP3A-215ENST00000583328 DDR2Q16832 855 aa13.25□□□□□ -0.29
TOP3A-215ENST00000583328 EML3Q32P44 896 aa13.25□□□□□ -0.29
TOP3A-215ENST00000583328 TRIM61Q5EBN2 209 aa13.25□□□□□ -0.29
TOP3A-215ENST00000583328 LPCAT2Q7L5N7 544 aa13.25□□□□□ -0.29
TOP3A-215ENST00000583328 RASSF3Q86WH2 238 aa13.25□□□□□ -0.29
TOP3A-215ENST00000583328 CCDC33Q8N5R6 958 aa13.25□□□□□ -0.29
TOP3A-215ENST00000583328 KCTD17Q8N5Z5 321 aa13.25□□□□□ -0.29
TOP3A-215ENST00000583328 FAM184AQ8NB25 1140 aa13.25□□□□□ -0.29
TOP3A-215ENST00000583328 CDK5RAP3Q96JB5 506 aa13.25□□□□□ -0.29
TOP3A-215ENST00000583328 CNOT6LQ96LI5 555 aaKnown RBP13.25□□□□□ -0.29
TOP3A-215ENST00000583328 PNMA5Q96PV4 448 aa13.25□□□□□ -0.29
TOP3A-215ENST00000583328 CYP2S1Q96SQ9 504 aa13.25□□□□□ -0.29
TOP3A-215ENST00000583328 LINC00597Q9H2U6 94 aa13.25□□□□□ -0.29
TOP3A-215ENST00000583328 ASB7Q9H672 318 aa13.25□□□□□ -0.29
TOP3A-215ENST00000583328 TMLHEQ9NVH6 421 aa13.25□□□□□ -0.29
TOP3A-215ENST00000583328 DPP3Q9NY33 737 aa13.25□□□□□ -0.29
TOP3A-215ENST00000583328 EVLQ9UI08 416 aaPredicted RBP13.25□□□□□ -0.29
TOP3A-215ENST00000583328 MSRB2Q9Y3D2 182 aa13.25□□□□□ -0.29
TOP3A-215ENST00000583328 ABCA7Q8IZY2 2146 aa13.25□□□□□ -0.29
TOP3A-215ENST00000583328 K7ENM7 598 aa13.24□□□□□ -0.29
TOP3A-215ENST00000583328 TULP1O00294 542 aaPredicted RBP13.24□□□□□ -0.29
TOP3A-215ENST00000583328 ALDH1A2O94788 518 aa13.24□□□□□ -0.29
TOP3A-215ENST00000583328 CKMP06732 381 aa13.24□□□□□ -0.29
TOP3A-215ENST00000583328 RDXP35241 583 aaKnown RBP13.24□□□□□ -0.29
TOP3A-215ENST00000583328 ACOT2P49753 483 aa13.24□□□□□ -0.29
TOP3A-215ENST00000583328 RPL10AP62906 217 aaKnown RBP13.24□□□□□ -0.29
TOP3A-215ENST00000583328 SIM1P81133 766 aaPredicted RBP13.24□□□□□ -0.29
TOP3A-215ENST00000583328 HYIQ5T013 277 aa13.24□□□□□ -0.29
TOP3A-215ENST00000583328 EFCAB13Q8IY85 973 aa13.24□□□□□ -0.29
TOP3A-215ENST00000583328 MYCT1Q8N699 235 aa13.24□□□□□ -0.29
TOP3A-215ENST00000583328 SH3RF2Q8TEC5 729 aa13.24□□□□□ -0.29
TOP3A-215ENST00000583328 KCNN1Q92952 543 aa13.24□□□□□ -0.29
TOP3A-215ENST00000583328 LLPHQ9BRT6 129 aaKnown RBP13.24□□□□□ -0.29
TOP3A-215ENST00000583328 TMEM206Q9H813 350 aa13.24□□□□□ -0.29
TOP3A-215ENST00000583328 C2CD2Q9Y426 696 aa13.24□□□□□ -0.29
TOP3A-215ENST00000583328 KIF26AQ9ULI4 1882 aaPredicted RBP13.23□□□□□ -0.29
TOP3A-215ENST00000583328 SPAARA0A1B0GVQ0 90 aa13.23□□□□□ -0.29
TOP3A-215ENST00000583328 KPNA7A9QM74 516 aa13.23□□□□□ -0.29
TOP3A-215ENST00000583328 K7EQS6 105 aa13.23□□□□□ -0.29
TOP3A-215ENST00000583328 TADA3O75528 432 aa13.23□□□□□ -0.29
TOP3A-215ENST00000583328 NOL4O94818 638 aa13.23□□□□□ -0.29
TOP3A-215ENST00000583328 FAM13AO94988 1023 aa13.23□□□□□ -0.29
TOP3A-215ENST00000583328 CD2BP2O95400 341 aaKnown RBP13.23□□□□□ -0.29
TOP3A-215ENST00000583328 NFATC1O95644 943 aa13.23□□□□□ -0.29
TOP3A-215ENST00000583328 SCP2P22307 547 aa13.23□□□□□ -0.29
TOP3A-215ENST00000583328 CYP2F1P24903 491 aa13.23□□□□□ -0.29
TOP3A-215ENST00000583328 HMGN5P82970 282 aaKnown RBP13.23□□□□□ -0.29
TOP3A-215ENST00000583328 USP4Q13107 963 aa13.23□□□□□ -0.29
TOP3A-215ENST00000583328 CRY1Q16526 586 aa13.23□□□□□ -0.29
TOP3A-215ENST00000583328 SV2CQ496J9 727 aa13.23□□□□□ -0.29
TOP3A-215ENST00000583328 ARSHQ5FYA8 562 aa13.23□□□□□ -0.29
TOP3A-215ENST00000583328 ADALQ6DHV7 355 aa13.23□□□□□ -0.29
TOP3A-215ENST00000583328 ARMCX6Q7L4S7 300 aa13.23□□□□□ -0.29
TOP3A-215ENST00000583328 ARL14EPQ8N8R7 260 aaPredicted RBP13.23□□□□□ -0.29
TOP3A-215ENST00000583328 FSIP1Q8NA03 581 aa13.23□□□□□ -0.29
TOP3A-215ENST00000583328 MDGA1Q8NFP4 955 aa13.23□□□□□ -0.29
TOP3A-215ENST00000583328 RLN3Q8WXF3 142 aa13.23□□□□□ -0.29
TOP3A-215ENST00000583328 SPACA7Q96KW9 195 aa13.23□□□□□ -0.29
TOP3A-215ENST00000583328 SLC22A12Q96S37 553 aa13.23□□□□□ -0.29
TOP3A-215ENST00000583328 CCSER1Q9C0I3 900 aa13.23□□□□□ -0.29
TOP3A-215ENST00000583328 KLK13Q9UKR3 277 aa13.23□□□□□ -0.29
TOP3A-215ENST00000583328 ODF2LQ9ULJ1 636 aa13.23□□□□□ -0.29
TOP3A-215ENST00000583328 MMP17Q9ULZ9 603 aa13.23□□□□□ -0.29
TOP3A-215ENST00000583328 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.22□□□□□ -0.29
TOP3A-215ENST00000583328 TNFRSF10BO14763 440 aa13.22□□□□□ -0.29
TOP3A-215ENST00000583328 ENGP17813 658 aa13.22□□□□□ -0.29
TOP3A-215ENST00000583328 HDCP19113 662 aa13.22□□□□□ -0.29
TOP3A-215ENST00000583328 ATXN3P54252 364 aaPredicted RBP13.22□□□□□ -0.29
TOP3A-215ENST00000583328 MRPS21P82921 87 aaKnown RBP13.22□□□□□ -0.29
TOP3A-215ENST00000583328 KCNB1Q14721 858 aa13.22□□□□□ -0.29
TOP3A-215ENST00000583328 SLC39A4Q6P5W5 647 aa13.22□□□□□ -0.29
TOP3A-215ENST00000583328 SYT12Q8IV01 421 aa13.22□□□□□ -0.29
TOP3A-215ENST00000583328 TMEFF1Q8IYR6 380 aa13.22□□□□□ -0.29
TOP3A-215ENST00000583328 HDDC3Q8N4P3 179 aa13.22□□□□□ -0.29
TOP3A-215ENST00000583328 OLIG1Q8TAK6 271 aa13.22□□□□□ -0.29
TOP3A-215ENST00000583328 TRMT2BQ96GJ1 504 aaKnown RBP13.22□□□□□ -0.29
TOP3A-215ENST00000583328 MYRFLQ96LU7 910 aa13.22□□□□□ -0.29
TOP3A-215ENST00000583328 ZNF560Q96MR9 790 aa13.22□□□□□ -0.29
TOP3A-215ENST00000583328 REEP2Q9BRK0 252 aa13.22□□□□□ -0.29
TOP3A-215ENST00000583328 ZHX3Q9H4I2 956 aa13.22□□□□□ -0.29
TOP3A-215ENST00000583328 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.22□□□□□ -0.29
TOP3A-215ENST00000583328 BCCIPQ9P287 314 aaKnown RBP eCLIP13.22□□□□□ -0.29
TOP3A-215ENST00000583328 ANTXRLA6NF34 631 aa13.21□□□□□ -0.29
TOP3A-215ENST00000583328 MYMKA6NI61 221 aa13.21□□□□□ -0.29
TOP3A-215ENST00000583328 ANKRD63C9JTQ0 380 aa13.21□□□□□ -0.29
TOP3A-215ENST00000583328 H0Y626 953 aa13.21□□□□□ -0.29
TOP3A-215ENST00000583328 TRAK2O60296 914 aa13.21□□□□□ -0.29
TOP3A-215ENST00000583328 TRIM16O95361 564 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms