RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 CYP27A1Q02318 531 aa20.83■□□□□ 0.93
SREBF1-220ENST00000581707 ZACNQ401N2 412 aa20.83■□□□□ 0.93
SREBF1-220ENST00000581707 ZCWPW2Q504Y3 356 aa20.83■□□□□ 0.93
SREBF1-220ENST00000581707 ZNF667Q5HYK9 610 aa20.83■□□□□ 0.93
SREBF1-220ENST00000581707 C1orf220Q5T0J3 134 aa20.83■□□□□ 0.93
SREBF1-220ENST00000581707 ZNF658Q5TYW1 1059 aaPredicted RBP20.83■□□□□ 0.93
SREBF1-220ENST00000581707 INTS8Q75QN2 995 aaKnown RBP20.83■□□□□ 0.93
SREBF1-220ENST00000581707 SV2AQ7L0J3 742 aa20.83■□□□□ 0.93
SREBF1-220ENST00000581707 GPIHBP1Q8IV16 184 aa20.83■□□□□ 0.93
SREBF1-220ENST00000581707 MFSD6LQ8IWD5 586 aa20.83■□□□□ 0.93
SREBF1-220ENST00000581707 SCN4BQ8IWT1 228 aa20.83■□□□□ 0.93
SREBF1-220ENST00000581707 FAM186BQ8IYM0 893 aa20.83■□□□□ 0.93
SREBF1-220ENST00000581707 STKLD1Q8NE28 680 aa20.83■□□□□ 0.93
SREBF1-220ENST00000581707 MYCBPAPQ8TBZ2 947 aa20.83■□□□□ 0.93
SREBF1-220ENST00000581707 DEPDC1BQ8WUY9 529 aa20.83■□□□□ 0.93
SREBF1-220ENST00000581707 SMARCE1Q969G3 411 aa20.83■□□□□ 0.93
SREBF1-220ENST00000581707 MYLPFQ96A32 169 aa20.83■□□□□ 0.93
SREBF1-220ENST00000581707 IRF2BPLQ9H1B7 796 aa20.83■□□□□ 0.93
SREBF1-220ENST00000581707 NME7Q9Y5B8 376 aa20.83■□□□□ 0.93
SREBF1-220ENST00000581707 PCDHA5Q9Y5H7 936 aa20.83■□□□□ 0.93
SREBF1-220ENST00000581707 A8MXQ7 604 aa20.82■□□□□ 0.92
SREBF1-220ENST00000581707 F11P03951 625 aa20.82■□□□□ 0.92
SREBF1-220ENST00000581707 KRT13P13646 458 aa20.82■□□□□ 0.92
SREBF1-220ENST00000581707 BDNFP23560 247 aa20.82■□□□□ 0.92
SREBF1-220ENST00000581707 GDI1P31150 447 aa20.82■□□□□ 0.92
SREBF1-220ENST00000581707 PRCPP42785 496 aa20.82■□□□□ 0.92
SREBF1-220ENST00000581707 NLRP12P59046 1061 aa20.82■□□□□ 0.92
SREBF1-220ENST00000581707 SGSM1Q2NKQ1 1148 aa20.82■□□□□ 0.92
SREBF1-220ENST00000581707 EDRF1Q3B7T1 1238 aa20.82■□□□□ 0.92
SREBF1-220ENST00000581707 MDH1BQ5I0G3 518 aa20.82■□□□□ 0.92
SREBF1-220ENST00000581707 VSTM1Q6UX27 236 aa20.82■□□□□ 0.92
SREBF1-220ENST00000581707 TMEM150AQ86TG1 271 aa20.82■□□□□ 0.92
SREBF1-220ENST00000581707 SPATA20Q8TB22 786 aa20.82■□□□□ 0.92
SREBF1-220ENST00000581707 DNASE1L2Q92874 299 aa20.82■□□□□ 0.92
SREBF1-220ENST00000581707 ERCC4Q92889 916 aaPredicted RBP20.82■□□□□ 0.92
SREBF1-220ENST00000581707 IRF7Q92985 503 aa20.82■□□□□ 0.92
SREBF1-220ENST00000581707 RSPRY1Q96DX4 576 aa20.82■□□□□ 0.92
SREBF1-220ENST00000581707 PCED1BQ96HM7 432 aa20.82■□□□□ 0.92
SREBF1-220ENST00000581707 FOXQ1Q9C009 403 aa20.82■□□□□ 0.92
SREBF1-220ENST00000581707 UXTQ9UBK9 157 aaPredicted RBP20.82■□□□□ 0.92
SREBF1-220ENST00000581707 NUP210Q8TEM1 1887 aaPredicted RBP20.81■□□□□ 0.92
SREBF1-220ENST00000581707 NCANO14594 1321 aa20.81■□□□□ 0.92
SREBF1-220ENST00000581707 KANSL1LA0AUZ9 987 aa20.81■□□□□ 0.92
SREBF1-220ENST00000581707 SLC38A8A6NNN8 435 aa20.81■□□□□ 0.92
SREBF1-220ENST00000581707 DPYSL4O14531 572 aa20.81■□□□□ 0.92
SREBF1-220ENST00000581707 ZNF263O14978 683 aa20.81■□□□□ 0.92
SREBF1-220ENST00000581707 NOL4O94818 638 aa20.81■□□□□ 0.92
SREBF1-220ENST00000581707 P4HA1P13674 534 aa20.81■□□□□ 0.92
SREBF1-220ENST00000581707 PTPN1P18031 435 aaKnown RBP20.81■□□□□ 0.92
SREBF1-220ENST00000581707 WEE1P30291 646 aa20.81■□□□□ 0.92
SREBF1-220ENST00000581707 CDH8P55286 799 aa20.81■□□□□ 0.92
SREBF1-220ENST00000581707 YAF2Q8IY57 180 aa20.81■□□□□ 0.92
SREBF1-220ENST00000581707 CCDC105Q8IYK2 499 aa20.81■□□□□ 0.92
SREBF1-220ENST00000581707 DTWD2Q8NBA8 298 aa20.81■□□□□ 0.92
SREBF1-220ENST00000581707 PJA1Q8NG27 643 aa20.81■□□□□ 0.92
SREBF1-220ENST00000581707 ELMO3Q96BJ8 720 aa20.81■□□□□ 0.92
SREBF1-220ENST00000581707 TRMT2BQ96GJ1 504 aaKnown RBP20.81■□□□□ 0.92
SREBF1-220ENST00000581707 DDX23Q9BUQ8 820 aaKnown RBP20.81■□□□□ 0.92
SREBF1-220ENST00000581707 SLC46A2Q9BY10 475 aa20.81■□□□□ 0.92
SREBF1-220ENST00000581707 GTPBP4Q9BZE4 634 aaKnown RBP20.81■□□□□ 0.92
SREBF1-220ENST00000581707 SMYD3Q9H7B4 428 aa20.81■□□□□ 0.92
SREBF1-220ENST00000581707 HEBP1Q9NRV9 189 aa20.81■□□□□ 0.92
SREBF1-220ENST00000581707 ZMYM5Q9UJ78 669 aa20.81■□□□□ 0.92
SREBF1-220ENST00000581707 PIEZO1Q92508 2521 aa20.81■□□□□ 0.92
SREBF1-220ENST00000581707 PTPRDP23468 1912 aa20.8■□□□□ 0.92
SREBF1-220ENST00000581707 H0Y858 1186 aa20.8■□□□□ 0.92
SREBF1-220ENST00000581707 KINO60870 393 aaKnown RBP20.8■□□□□ 0.92
SREBF1-220ENST00000581707 DCNP07585 359 aaKnown RBP20.8■□□□□ 0.92
SREBF1-220ENST00000581707 TRIM49P0CI25 452 aa20.8■□□□□ 0.92
SREBF1-220ENST00000581707 TRIM49CP0CI26 452 aa20.8■□□□□ 0.92
SREBF1-220ENST00000581707 GRIK1P39086 918 aa20.8■□□□□ 0.92
SREBF1-220ENST00000581707 PIK3CAP42336 1068 aa20.8■□□□□ 0.92
SREBF1-220ENST00000581707 ENPEPQ07075 957 aa20.8■□□□□ 0.92
SREBF1-220ENST00000581707 COBLL1Q53SF7 1204 aa20.8■□□□□ 0.92
SREBF1-220ENST00000581707 SCARA5Q6ZMJ2 495 aa20.8■□□□□ 0.92
SREBF1-220ENST00000581707 TPRG1Q6ZUI0 275 aa20.8■□□□□ 0.92
SREBF1-220ENST00000581707 ELOA2Q8IYF1 753 aaPredicted RBP20.8■□□□□ 0.92
SREBF1-220ENST00000581707 B3GALNT2Q8NCR0 500 aa20.8■□□□□ 0.92
SREBF1-220ENST00000581707 MRPS31Q92665 395 aaKnown RBP20.8■□□□□ 0.92
SREBF1-220ENST00000581707 TAF4BQ92750 862 aa20.8■□□□□ 0.92
SREBF1-220ENST00000581707 EEF2KMTQ96G04 330 aa20.8■□□□□ 0.92
SREBF1-220ENST00000581707 SPATA17Q96L03 361 aa20.8■□□□□ 0.92
SREBF1-220ENST00000581707 MYRFLQ96LU7 910 aa20.8■□□□□ 0.92
SREBF1-220ENST00000581707 DPEP3Q9H4B8 488 aa20.8■□□□□ 0.92
SREBF1-220ENST00000581707 TRPV5Q9NQA5 729 aa20.8■□□□□ 0.92
SREBF1-220ENST00000581707 ZNF638Q14966 1978 aaKnown RBP20.79■□□□□ 0.92
SREBF1-220ENST00000581707 CETN3O15182 167 aa20.79■□□□□ 0.92
SREBF1-220ENST00000581707 GADD45BO75293 160 aaPredicted RBP20.79■□□□□ 0.92
SREBF1-220ENST00000581707 HLA-DRAP01903 254 aa20.79■□□□□ 0.92
SREBF1-220ENST00000581707 CD72P21854 359 aa20.79■□□□□ 0.92
SREBF1-220ENST00000581707 DDX6P26196 483 aaKnown RBP eCLIP20.79■□□□□ 0.92
SREBF1-220ENST00000581707 RAP1GAPP47736 663 aa20.79■□□□□ 0.92
SREBF1-220ENST00000581707 GCLMP48507 274 aa20.79■□□□□ 0.92
SREBF1-220ENST00000581707 PPP3CAQ08209 521 aa20.79■□□□□ 0.92
SREBF1-220ENST00000581707 CMTM8Q8IZV2 173 aa20.79■□□□□ 0.92
SREBF1-220ENST00000581707 MAB21L3Q8N8X9 362 aa20.79■□□□□ 0.92
SREBF1-220ENST00000581707 ATOH1Q92858 354 aaPredicted RBP20.79■□□□□ 0.92
SREBF1-220ENST00000581707 CEP295NLQ96MC4 621 aa20.79■□□□□ 0.92
SREBF1-220ENST00000581707 LRRC3BQ96PB8 259 aa20.79■□□□□ 0.92
SREBF1-220ENST00000581707 TSG101Q99816 390 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms