RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 NOL4O94818 638 aa11.39□□□□□ -0.59
RFFL-209ENST00000581265 GCNT3O95395 438 aa11.39□□□□□ -0.59
RFFL-209ENST00000581265 C1QTNF9P0C862 333 aa11.39□□□□□ -0.59
RFFL-209ENST00000581265 CYP2F1P24903 491 aa11.39□□□□□ -0.59
RFFL-209ENST00000581265 TXLNAP40222 546 aa11.39□□□□□ -0.59
RFFL-209ENST00000581265 CASP5P51878 434 aa11.39□□□□□ -0.59
RFFL-209ENST00000581265 RBP5P82980 135 aa11.39□□□□□ -0.59
RFFL-209ENST00000581265 MYL7Q01449 175 aa11.39□□□□□ -0.59
RFFL-209ENST00000581265 GRSF1Q12849 480 aaKnown RBP eCLIP11.39□□□□□ -0.59
RFFL-209ENST00000581265 PDGFRLQ15198 375 aa11.39□□□□□ -0.59
RFFL-209ENST00000581265 DDR2Q16832 855 aa11.39□□□□□ -0.59
RFFL-209ENST00000581265 CFAP221Q4G0U5 840 aa11.39□□□□□ -0.59
RFFL-209ENST00000581265 INTS6LQ5JSJ4 861 aaKnown RBP11.39□□□□□ -0.59
RFFL-209ENST00000581265 SCARA3Q6AZY7 606 aa11.39□□□□□ -0.59
RFFL-209ENST00000581265 FSTL4Q6MZW2 842 aa11.39□□□□□ -0.59
RFFL-209ENST00000581265 DPH6Q7L8W6 267 aa11.39□□□□□ -0.59
RFFL-209ENST00000581265 SYCP3Q8IZU3 236 aa11.39□□□□□ -0.59
RFFL-209ENST00000581265 FAM160A2Q8N612 972 aaPredicted RBP11.39□□□□□ -0.59
RFFL-209ENST00000581265 SAAL1Q96ER3 474 aa11.39□□□□□ -0.59
RFFL-209ENST00000581265 TRMT2BQ96GJ1 504 aaKnown RBP11.39□□□□□ -0.59
RFFL-209ENST00000581265 EBF3Q9H4W6 596 aa11.39□□□□□ -0.59
RFFL-209ENST00000581265 TMEM206Q9H813 350 aa11.39□□□□□ -0.59
RFFL-209ENST00000581265 DDX43Q9NXZ2 648 aaKnown RBP11.39□□□□□ -0.59
RFFL-209ENST00000581265 RBAKQ9NYW8 714 aaPredicted RBP11.39□□□□□ -0.59
RFFL-209ENST00000581265 UXTQ9UBK9 157 aaPredicted RBP11.39□□□□□ -0.59
RFFL-209ENST00000581265 GTF3C4Q9UKN8 822 aa11.39□□□□□ -0.59
RFFL-209ENST00000581265 ITGA11Q9UKX5 1188 aa11.39□□□□□ -0.59
RFFL-209ENST00000581265 MAGED2Q9UNF1 606 aaPredicted RBP11.39□□□□□ -0.59
RFFL-209ENST00000581265 LHX6Q9UPM6 363 aa11.39□□□□□ -0.59
RFFL-209ENST00000581265 TSC2P49815 1807 aa11.39□□□□□ -0.59
RFFL-209ENST00000581265 KIAA0391O15091 583 aaKnown RBP11.38□□□□□ -0.59
RFFL-209ENST00000581265 IDEP14735 1019 aa11.38□□□□□ -0.59
RFFL-209ENST00000581265 SYT1P21579 422 aa11.38□□□□□ -0.59
RFFL-209ENST00000581265 PCSK1P29120 753 aa11.38□□□□□ -0.59
RFFL-209ENST00000581265 HOXC13P31276 330 aa11.38□□□□□ -0.59
RFFL-209ENST00000581265 LHX1P48742 406 aa11.38□□□□□ -0.59
RFFL-209ENST00000581265 GPR15P49685 360 aa11.38□□□□□ -0.59
RFFL-209ENST00000581265 GALK1P51570 392 aa11.38□□□□□ -0.59
RFFL-209ENST00000581265 RESTQ13127 1097 aa11.38□□□□□ -0.59
RFFL-209ENST00000581265 SLC39A14Q15043 492 aa11.38□□□□□ -0.59
RFFL-209ENST00000581265 SOWAHAQ2M3V2 549 aa11.38□□□□□ -0.59
RFFL-209ENST00000581265 SDHAF4Q5VUM1 108 aa11.38□□□□□ -0.59
RFFL-209ENST00000581265 TRIM68Q6AZZ1 485 aa11.38□□□□□ -0.59
RFFL-209ENST00000581265 CC2D1AQ6P1N0 951 aaPredicted RBP11.38□□□□□ -0.59
RFFL-209ENST00000581265 FAM173BQ6P4H8 233 aa11.38□□□□□ -0.59
RFFL-209ENST00000581265 PKN3Q6P5Z2 889 aa11.38□□□□□ -0.59
RFFL-209ENST00000581265 FAM171BQ6P995 826 aa11.38□□□□□ -0.59
RFFL-209ENST00000581265 LRSAM1Q6UWE0 723 aa11.38□□□□□ -0.59
RFFL-209ENST00000581265 LIMS2Q7Z4I7 341 aa11.38□□□□□ -0.59
RFFL-209ENST00000581265 CAMKK1Q8N5S9 505 aa11.38□□□□□ -0.59
RFFL-209ENST00000581265 TOP6BLQ8N6T0 577 aa11.38□□□□□ -0.59
RFFL-209ENST00000581265 RIN3Q8TB24 985 aa11.38□□□□□ -0.59
RFFL-209ENST00000581265 GAB3Q8WWW8 586 aa11.38□□□□□ -0.59
RFFL-209ENST00000581265 FUBP3Q96I24 572 aaKnown RBP eCLIP11.38□□□□□ -0.59
RFFL-209ENST00000581265 LOXL4Q96JB6 756 aa11.38□□□□□ -0.59
RFFL-209ENST00000581265 CBWD1Q9BRT8 395 aa11.38□□□□□ -0.59
RFFL-209ENST00000581265 PANK2Q9BZ23 570 aa11.38□□□□□ -0.59
RFFL-209ENST00000581265 FBRSL1Q9HCM7 1045 aaKnown RBP11.38□□□□□ -0.59
RFFL-209ENST00000581265 PDE11AQ9HCR9 933 aa11.38□□□□□ -0.59
RFFL-209ENST00000581265 PANK4Q9NVE7 773 aa11.38□□□□□ -0.59
RFFL-209ENST00000581265 SIX4Q9UIU6 781 aa11.38□□□□□ -0.59
RFFL-209ENST00000581265 SNX9Q9Y5X1 595 aa11.38□□□□□ -0.59
RFFL-209ENST00000581265 CFAP47Q6ZTR5 3102 aa11.38□□□□□ -0.59
RFFL-209ENST00000581265 PKD1L2Q7Z442 2459 aa11.37□□□□□ -0.59
RFFL-209ENST00000581265 GOLGA8IPA6NC78 632 aa11.37□□□□□ -0.59
RFFL-209ENST00000581265 GOLGA8JA6NMD2 632 aa11.37□□□□□ -0.59
RFFL-209ENST00000581265 TADA3O75528 432 aa11.37□□□□□ -0.59
RFFL-209ENST00000581265 KCNK5O95279 499 aa11.37□□□□□ -0.59
RFFL-209ENST00000581265 USP17L7P0C7H9 530 aa11.37□□□□□ -0.59
RFFL-209ENST00000581265 ARSAP15289 507 aa11.37□□□□□ -0.59
RFFL-209ENST00000581265 DRD1P21728 446 aa11.37□□□□□ -0.59
RFFL-209ENST00000581265 ACAT1P24752 427 aaKnown RBP11.37□□□□□ -0.59
RFFL-209ENST00000581265 GJA4P35212 333 aa11.37□□□□□ -0.59
RFFL-209ENST00000581265 STAT6P42226 847 aa11.37□□□□□ -0.59
RFFL-209ENST00000581265 RAP1GAPP47736 663 aa11.37□□□□□ -0.59
RFFL-209ENST00000581265 LIMK1P53667 647 aa11.37□□□□□ -0.59
RFFL-209ENST00000581265 CEBPZQ03701 1054 aaKnown RBP11.37□□□□□ -0.59
RFFL-209ENST00000581265 FAM160A1Q05DH4 1040 aa11.37□□□□□ -0.59
RFFL-209ENST00000581265 FBXO43Q4G163 708 aa11.37□□□□□ -0.59
RFFL-209ENST00000581265 OSTM1Q86WC4 334 aa11.37□□□□□ -0.59
RFFL-209ENST00000581265 ADGRF2Q8IZF7 708 aa11.37□□□□□ -0.59
RFFL-209ENST00000581265 GPD1LQ8N335 351 aa11.37□□□□□ -0.59
RFFL-209ENST00000581265 EXOC4Q96A65 974 aa11.37□□□□□ -0.59
RFFL-209ENST00000581265 CEP295NLQ96MC4 621 aa11.37□□□□□ -0.59
RFFL-209ENST00000581265 CYP2S1Q96SQ9 504 aa11.37□□□□□ -0.59
RFFL-209ENST00000581265 P2RY13Q9BPV8 354 aa11.37□□□□□ -0.59
RFFL-209ENST00000581265 FGFBP2Q9BYJ0 223 aa11.37□□□□□ -0.59
RFFL-209ENST00000581265 PCIF1Q9H4Z3 704 aa11.37□□□□□ -0.59
RFFL-209ENST00000581265 ECT2Q9H8V3 914 aa11.37□□□□□ -0.59
RFFL-209ENST00000581265 INTS13Q9NVM9 706 aa11.37□□□□□ -0.59
RFFL-209ENST00000581265 SLC8A2Q9UPR5 921 aa11.37□□□□□ -0.59
RFFL-209ENST00000581265 TCHHQ07283 1943 aa11.37□□□□□ -0.59
RFFL-209ENST00000581265 DENND4CQ5VZ89 1909 aa11.37□□□□□ -0.59
RFFL-209ENST00000581265 RALGAPA1Q6GYQ0 2036 aa11.36□□□□□ -0.59
RFFL-209ENST00000581265 ATG2BQ96BY7 2078 aa11.36□□□□□ -0.59
RFFL-209ENST00000581265 A0A087X0B3 334 aa11.36□□□□□ -0.59
RFFL-209ENST00000581265 TMEM8BA6NDV4 472 aa11.36□□□□□ -0.59
RFFL-209ENST00000581265 ZNF233A6NK53 670 aa11.36□□□□□ -0.59
RFFL-209ENST00000581265 TULP1O00294 542 aaPredicted RBP11.36□□□□□ -0.59
RFFL-209ENST00000581265 AXIN1O15169 862 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms