RNA–Protein interactions for RNA: ENST00000581108.5

CSNK1D-216, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-216ENST00000581108 EP300Q09472 2414 aaPredicted RBP22.8■■□□□ 1.24
CSNK1D-216ENST00000581108 SLC38A8A6NNN8 435 aa22.8■■□□□ 1.24
CSNK1D-216ENST00000581108 PDGFRBP09619 1106 aa22.8■■□□□ 1.24
CSNK1D-216ENST00000581108 SOX9P48436 509 aa22.8■■□□□ 1.24
CSNK1D-216ENST00000581108 KRT85P78386 507 aa22.8■■□□□ 1.24
CSNK1D-216ENST00000581108 KMT5BQ4FZB7 885 aa22.8■■□□□ 1.24
CSNK1D-216ENST00000581108 ARHGAP29Q52LW3 1261 aa22.8■■□□□ 1.24
CSNK1D-216ENST00000581108 CMTM8Q8IZV2 173 aa22.8■■□□□ 1.24
CSNK1D-216ENST00000581108 ADSSL1Q8N142 457 aa22.8■■□□□ 1.24
CSNK1D-216ENST00000581108 MAB21L3Q8N8X9 362 aa22.8■■□□□ 1.24
CSNK1D-216ENST00000581108 KIAA0895Q8NCT3 520 aa22.8■■□□□ 1.24
CSNK1D-216ENST00000581108 BPIFB1Q8TDL5 484 aa22.8■■□□□ 1.24
CSNK1D-216ENST00000581108 SYT15Q9BQS2 421 aa22.8■■□□□ 1.24
CSNK1D-216ENST00000581108 SEMA4AQ9H3S1 761 aa22.8■■□□□ 1.24
CSNK1D-216ENST00000581108 LMAN1LQ9HAT1 526 aa22.8■■□□□ 1.24
CSNK1D-216ENST00000581108 GTSE1Q9NYZ3 720 aa22.8■■□□□ 1.24
CSNK1D-216ENST00000581108 HPSEQ9Y251 543 aa22.8■■□□□ 1.24
CSNK1D-216ENST00000581108 GREB1Q4ZG55 1949 aa22.8■■□□□ 1.24
CSNK1D-216ENST00000581108 GVINP1Q7Z2Y8 2422 aa22.79■■□□□ 1.24
CSNK1D-216ENST00000581108 EXOC3O60645 756 aa22.79■■□□□ 1.24
CSNK1D-216ENST00000581108 WARSP23381 471 aaKnown RBP22.79■■□□□ 1.24
CSNK1D-216ENST00000581108 KPNA1P52294 538 aaPredicted RBP22.79■■□□□ 1.24
CSNK1D-216ENST00000581108 MLLT6P55198 1093 aaPredicted RBP22.79■■□□□ 1.24
CSNK1D-216ENST00000581108 PSMC1P62191 440 aaKnown RBP22.79■■□□□ 1.24
CSNK1D-216ENST00000581108 MTAPQ13126 283 aa22.79■■□□□ 1.24
CSNK1D-216ENST00000581108 ZNF528Q3MIS6 628 aa22.79■■□□□ 1.24
CSNK1D-216ENST00000581108 CFAP221Q4G0U5 840 aa22.79■■□□□ 1.24
CSNK1D-216ENST00000581108 TXNDC8Q6A555 127 aa22.79■■□□□ 1.24
CSNK1D-216ENST00000581108 ZC3H14Q6PJT7 736 aaKnown RBP22.79■■□□□ 1.24
CSNK1D-216ENST00000581108 SCN4BQ8IWT1 228 aa22.79■■□□□ 1.24
CSNK1D-216ENST00000581108 CELF5Q8N6W0 485 aaKnown RBP22.79■■□□□ 1.24
CSNK1D-216ENST00000581108 CRTAC1Q9NQ79 661 aa22.79■■□□□ 1.24
CSNK1D-216ENST00000581108 EXOC1Q9NV70 894 aa22.79■■□□□ 1.24
CSNK1D-216ENST00000581108 CDH9Q9ULB4 789 aa22.79■■□□□ 1.24
CSNK1D-216ENST00000581108 SPTBN4Q9H254 2564 aa22.79■■□□□ 1.24
CSNK1D-216ENST00000581108 PTPRDP23468 1912 aa22.78■■□□□ 1.24
CSNK1D-216ENST00000581108 ZNF292O60281 2723 aa22.78■■□□□ 1.24
CSNK1D-216ENST00000581108 LMNAP02545 664 aaKnown RBP22.78■■□□□ 1.24
CSNK1D-216ENST00000581108 CASP4P49662 377 aa22.78■■□□□ 1.24
CSNK1D-216ENST00000581108 PSMD2Q13200 908 aa22.78■■□□□ 1.24
CSNK1D-216ENST00000581108 TSSK4Q6SA08 328 aa22.78■■□□□ 1.24
CSNK1D-216ENST00000581108 PLEKHO2Q8TD55 490 aa22.78■■□□□ 1.24
CSNK1D-216ENST00000581108 FUBP3Q96I24 572 aaKnown RBP eCLIP22.78■■□□□ 1.24
CSNK1D-216ENST00000581108 MRPL45Q9BRJ2 306 aaKnown RBP22.78■■□□□ 1.24
CSNK1D-216ENST00000581108 MAGEC2Q9UBF1 373 aaPredicted RBP22.78■■□□□ 1.24
CSNK1D-216ENST00000581108 USP25Q9UHP3 1055 aa22.78■■□□□ 1.24
CSNK1D-216ENST00000581108 ZMYM5Q9UJ78 669 aa22.78■■□□□ 1.24
CSNK1D-216ENST00000581108 CCL26Q9Y258 94 aa22.78■■□□□ 1.24
CSNK1D-216ENST00000581108 ANAPC1Q9H1A4 1944 aa22.78■■□□□ 1.24
CSNK1D-216ENST00000581108 NOL4O94818 638 aa22.77■■□□□ 1.24
CSNK1D-216ENST00000581108 AVPR1AP37288 418 aa22.77■■□□□ 1.24
CSNK1D-216ENST00000581108 NDUFA8P51970 172 aa22.77■■□□□ 1.24
CSNK1D-216ENST00000581108 MYL6P60660 151 aa22.77■■□□□ 1.24
CSNK1D-216ENST00000581108 TNK2Q07912 1038 aa22.77■■□□□ 1.24
CSNK1D-216ENST00000581108 WDR72Q3MJ13 1102 aa22.77■■□□□ 1.24
CSNK1D-216ENST00000581108 C4orf50Q6ZRC1 276 aa22.77■■□□□ 1.24
CSNK1D-216ENST00000581108 MON1AQ86VX9 555 aa22.77■■□□□ 1.24
CSNK1D-216ENST00000581108 GOLGA5Q8TBA6 731 aa22.77■■□□□ 1.24
CSNK1D-216ENST00000581108 MRPS31Q92665 395 aaKnown RBP22.77■■□□□ 1.24
CSNK1D-216ENST00000581108 USP13Q92995 863 aaPredicted RBP22.77■■□□□ 1.24
CSNK1D-216ENST00000581108 MYLPFQ96A32 169 aa22.77■■□□□ 1.24
CSNK1D-216ENST00000581108 TRMT2BQ96GJ1 504 aaKnown RBP22.77■■□□□ 1.24
CSNK1D-216ENST00000581108 MYRFLQ96LU7 910 aa22.77■■□□□ 1.24
CSNK1D-216ENST00000581108 CHRDQ9H2X0 955 aa22.77■■□□□ 1.24
CSNK1D-216ENST00000581108 C8orf33Q9H7E9 229 aaPredicted RBP22.77■■□□□ 1.24
CSNK1D-216ENST00000581108 THG1LQ9NWX6 298 aaKnown RBP22.77■■□□□ 1.24
CSNK1D-216ENST00000581108 NME7Q9Y5B8 376 aa22.77■■□□□ 1.24
CSNK1D-216ENST00000581108 FRYLO94915 3013 aa22.77■■□□□ 1.24
CSNK1D-216ENST00000581108 SPECC1L-ADORA2AF8WAN1 911 aa22.76■■□□□ 1.23
CSNK1D-216ENST00000581108 CHRNB1P11230 501 aa22.76■■□□□ 1.23
CSNK1D-216ENST00000581108 DDX6P26196 483 aaKnown RBP eCLIP22.76■■□□□ 1.23
CSNK1D-216ENST00000581108 GNL1P36915 607 aaPredicted RBP22.76■■□□□ 1.23
CSNK1D-216ENST00000581108 MAGEA11P43364 429 aa22.76■■□□□ 1.23
CSNK1D-216ENST00000581108 TRPC3Q13507 836 aa22.76■■□□□ 1.23
CSNK1D-216ENST00000581108 TXNDC11Q6PKC3 985 aa22.76■■□□□ 1.23
CSNK1D-216ENST00000581108 SNX25Q9H3E2 840 aa22.76■■□□□ 1.23
CSNK1D-216ENST00000581108 KCTD10Q9H3F6 313 aa22.76■■□□□ 1.23
CSNK1D-216ENST00000581108 GKN1Q9NS71 199 aa22.76■■□□□ 1.23
CSNK1D-216ENST00000581108 TDP1Q9NUW8 608 aa22.76■■□□□ 1.23
CSNK1D-216ENST00000581108 DMAC2Q9NW81 257 aa22.76■■□□□ 1.23
CSNK1D-216ENST00000581108 UXTQ9UBK9 157 aaPredicted RBP22.76■■□□□ 1.23
CSNK1D-216ENST00000581108 SOBPA7XYQ1 873 aa22.75■■□□□ 1.23
CSNK1D-216ENST00000581108 PHACTR2O75167 634 aa22.75■■□□□ 1.23
CSNK1D-216ENST00000581108 TACC1O75410 805 aa22.75■■□□□ 1.23
CSNK1D-216ENST00000581108 TADA3O75528 432 aa22.75■■□□□ 1.23
CSNK1D-216ENST00000581108 BDNFP23560 247 aa22.75■■□□□ 1.23
CSNK1D-216ENST00000581108 SYKP43405 635 aa22.75■■□□□ 1.23
CSNK1D-216ENST00000581108 TNNC1P63316 161 aa22.75■■□□□ 1.23
CSNK1D-216ENST00000581108 PLCB2Q00722 1185 aa22.75■■□□□ 1.23
CSNK1D-216ENST00000581108 CYP27A1Q02318 531 aa22.75■■□□□ 1.23
CSNK1D-216ENST00000581108 MAPRE1Q15691 268 aaKnown RBP22.75■■□□□ 1.23
CSNK1D-216ENST00000581108 RALGPS2Q86X27 583 aaPredicted RBP22.75■■□□□ 1.23
CSNK1D-216ENST00000581108 OR6B3Q8NGW1 331 aa22.75■■□□□ 1.23
CSNK1D-216ENST00000581108 PARD3BQ8TEW8 1205 aa22.75■■□□□ 1.23
CSNK1D-216ENST00000581108 MSANTD3Q96H12 275 aa22.75■■□□□ 1.23
CSNK1D-216ENST00000581108 PCED1BQ96HM7 432 aa22.75■■□□□ 1.23
CSNK1D-216ENST00000581108 XYLT2Q9H1B5 865 aa22.75■■□□□ 1.23
CSNK1D-216ENST00000581108 NXF1Q9UBU9 619 aaKnown RBP22.75■■□□□ 1.23
CSNK1D-216ENST00000581108 FAM237AA0A1B0GTK4 181 aa22.74■■□□□ 1.23
CSNK1D-216ENST00000581108 LRRIQ3A6PVS8 624 aaPredicted RBP22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms