RNA–Protein interactions for RNA: ENST00000579780.5

CDK5RAP3-215, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 611 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-215ENST00000579780 SMARCB1Q12824 385 aa17.72■□□□□ 0.43
CDK5RAP3-215ENST00000579780 NFE2Q16621 373 aaPredicted RBP17.72■□□□□ 0.43
CDK5RAP3-215ENST00000579780 CCDC142Q17RM4 750 aa17.72■□□□□ 0.43
CDK5RAP3-215ENST00000579780 PKDCCQ504Y2 493 aa17.72■□□□□ 0.43
CDK5RAP3-215ENST00000579780 NAA35Q5VZE5 725 aa17.72■□□□□ 0.43
CDK5RAP3-215ENST00000579780 KIAA1841Q6NSI8 718 aa17.72■□□□□ 0.43
CDK5RAP3-215ENST00000579780 C4orf50Q6ZRC1 276 aa17.72■□□□□ 0.43
CDK5RAP3-215ENST00000579780 TAS1R1Q7RTX1 841 aa17.72■□□□□ 0.43
CDK5RAP3-215ENST00000579780 FAM35AQ86V20 835 aa17.72■□□□□ 0.43
CDK5RAP3-215ENST00000579780 ZSCAN30Q86W11 494 aa17.72■□□□□ 0.43
CDK5RAP3-215ENST00000579780 TTC30AQ86WT1 665 aa17.72■□□□□ 0.43
CDK5RAP3-215ENST00000579780 PASD1Q8IV76 773 aa17.72■□□□□ 0.43
CDK5RAP3-215ENST00000579780 TDHQ8IZJ6 230 aa17.72■□□□□ 0.43
CDK5RAP3-215ENST00000579780 ANKRD52Q8NB46 1076 aa17.72■□□□□ 0.43
CDK5RAP3-215ENST00000579780 KLHL23Q8NBE8 558 aa17.72■□□□□ 0.43
CDK5RAP3-215ENST00000579780 C1orf131Q8NDD1 294 aaKnown RBP17.72■□□□□ 0.43
CDK5RAP3-215ENST00000579780 KIAA1524Q8TCG1 905 aa17.72■□□□□ 0.43
CDK5RAP3-215ENST00000579780 RIN2Q8WYP3 895 aaPredicted RBP17.72■□□□□ 0.43
CDK5RAP3-215ENST00000579780 SMARCD1Q96GM5 515 aa17.72■□□□□ 0.43
CDK5RAP3-215ENST00000579780 PCED1BQ96HM7 432 aa17.72■□□□□ 0.43
CDK5RAP3-215ENST00000579780 B3GALT6Q96L58 329 aa17.72■□□□□ 0.43
CDK5RAP3-215ENST00000579780 C11orf84Q9BUA3 381 aaPredicted RBP17.72■□□□□ 0.43
CDK5RAP3-215ENST00000579780 ISCUQ9H1K1 167 aa17.72■□□□□ 0.43
CDK5RAP3-215ENST00000579780 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.72■□□□□ 0.43
CDK5RAP3-215ENST00000579780 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.72■□□□□ 0.43
CDK5RAP3-215ENST00000579780 INTUQ9ULD6 942 aa17.72■□□□□ 0.43
CDK5RAP3-215ENST00000579780 PPP2R2CQ9Y2T4 447 aa17.72■□□□□ 0.43
CDK5RAP3-215ENST00000579780 PCDHA13Q9Y5I0 950 aa17.72■□□□□ 0.43
CDK5RAP3-215ENST00000579780 TNRC18O15417 2968 aaPredicted RBP17.71■□□□□ 0.43
CDK5RAP3-215ENST00000579780 ZSCAN12O43309 604 aa17.71■□□□□ 0.43
CDK5RAP3-215ENST00000579780 ARHGEF15O94989 841 aa17.71■□□□□ 0.43
CDK5RAP3-215ENST00000579780 CTSAP10619 480 aa17.71■□□□□ 0.43
CDK5RAP3-215ENST00000579780 MYOGP15173 224 aa17.71■□□□□ 0.43
CDK5RAP3-215ENST00000579780 NPR3P17342 541 aa17.71■□□□□ 0.43
CDK5RAP3-215ENST00000579780 ADORA2BP29275 332 aa17.71■□□□□ 0.43
CDK5RAP3-215ENST00000579780 MAGEA1P43355 309 aa17.71■□□□□ 0.43
CDK5RAP3-215ENST00000579780 NSFP46459 744 aaKnown RBP17.71■□□□□ 0.43
CDK5RAP3-215ENST00000579780 SLC8B1Q6J4K2 584 aa17.71■□□□□ 0.43
CDK5RAP3-215ENST00000579780 DENND1BQ6P3S1 775 aa17.71■□□□□ 0.43
CDK5RAP3-215ENST00000579780 ZNF662Q6ZS27 426 aa17.71■□□□□ 0.43
CDK5RAP3-215ENST00000579780 PHF13Q86YI8 300 aaPredicted RBP17.71■□□□□ 0.43
CDK5RAP3-215ENST00000579780 VPS52Q8N1B4 723 aa17.71■□□□□ 0.43
CDK5RAP3-215ENST00000579780 MSANTD4Q8NCY6 345 aa17.71■□□□□ 0.43
CDK5RAP3-215ENST00000579780 TRIM11Q96F44 468 aa17.71■□□□□ 0.43
CDK5RAP3-215ENST00000579780 FUBP3Q96I24 572 aaKnown RBP eCLIP17.71■□□□□ 0.43
CDK5RAP3-215ENST00000579780 NOX5Q96PH1 765 aa17.71■□□□□ 0.43
CDK5RAP3-215ENST00000579780 TGS1Q96RS0 853 aaKnown RBP17.71■□□□□ 0.43
CDK5RAP3-215ENST00000579780 TMEM209Q96SK2 561 aa17.71■□□□□ 0.43
CDK5RAP3-215ENST00000579780 C17orf80Q9BSJ5 609 aa17.71■□□□□ 0.43
CDK5RAP3-215ENST00000579780 B3GNT5Q9BYG0 378 aa17.71■□□□□ 0.43
CDK5RAP3-215ENST00000579780 PBX4Q9BYU1 374 aa17.71■□□□□ 0.43
CDK5RAP3-215ENST00000579780 KRT82Q9NSB4 513 aa17.71■□□□□ 0.43
CDK5RAP3-215ENST00000579780 TAS2R14Q9NYV8 317 aa17.71■□□□□ 0.43
CDK5RAP3-215ENST00000579780 SSX2IPQ9Y2D8 614 aa17.71■□□□□ 0.43
CDK5RAP3-215ENST00000579780 YBX2Q9Y2T7 364 aaKnown RBP17.71■□□□□ 0.43
CDK5RAP3-215ENST00000579780 PDE4DIPQ5VU43 2346 aa17.71■□□□□ 0.43
CDK5RAP3-215ENST00000579780 MYH10P35580 1976 aa17.7■□□□□ 0.42
CDK5RAP3-215ENST00000579780 PJA2O43164 708 aa17.7■□□□□ 0.42
CDK5RAP3-215ENST00000579780 H2AFZP0C0S5 128 aa17.7■□□□□ 0.42
CDK5RAP3-215ENST00000579780 FAM200BP0CF97 657 aa17.7■□□□□ 0.42
CDK5RAP3-215ENST00000579780 SSTR3P32745 418 aaPredicted RBP17.7■□□□□ 0.42
CDK5RAP3-215ENST00000579780 GPD2P43304 727 aa17.7■□□□□ 0.42
CDK5RAP3-215ENST00000579780 ERVK-21P61565 698 aa17.7■□□□□ 0.42
CDK5RAP3-215ENST00000579780 PDCLQ13371 301 aa17.7■□□□□ 0.42
CDK5RAP3-215ENST00000579780 CFAP221Q4G0U5 840 aa17.7■□□□□ 0.42
CDK5RAP3-215ENST00000579780 ACAD10Q6JQN1 1059 aa17.7■□□□□ 0.42
CDK5RAP3-215ENST00000579780 PRSS55Q6UWB4 352 aaPredicted RBP17.7■□□□□ 0.42
CDK5RAP3-215ENST00000579780 PAQR9Q6ZVX9 377 aa17.7■□□□□ 0.42
CDK5RAP3-215ENST00000579780 H2AFVQ71UI9 128 aa17.7■□□□□ 0.42
CDK5RAP3-215ENST00000579780 MON1BQ7L1V2 547 aa17.7■□□□□ 0.42
CDK5RAP3-215ENST00000579780 KIAA1328Q86T90 577 aa17.7■□□□□ 0.42
CDK5RAP3-215ENST00000579780 C2orf15Q8WU43 125 aaKnown RBP17.7■□□□□ 0.42
CDK5RAP3-215ENST00000579780 SECISBP2LQ93073 1101 aaKnown RBP17.7■□□□□ 0.42
CDK5RAP3-215ENST00000579780 LPIN3Q9BQK8 851 aa17.7■□□□□ 0.42
CDK5RAP3-215ENST00000579780 MED10Q9BTT4 135 aa17.7■□□□□ 0.42
CDK5RAP3-215ENST00000579780 DUSP16Q9BY84 665 aa17.7■□□□□ 0.42
CDK5RAP3-215ENST00000579780 TSGA10Q9BZW7 698 aa17.7■□□□□ 0.42
CDK5RAP3-215ENST00000579780 PRO3102Q9H379 93 aa17.7■□□□□ 0.42
CDK5RAP3-215ENST00000579780 ABCB6Q9NP58 842 aa17.7■□□□□ 0.42
CDK5RAP3-215ENST00000579780 CYLDQ9NQC7 956 aa17.7■□□□□ 0.42
CDK5RAP3-215ENST00000579780 GTF3C4Q9UKN8 822 aa17.7■□□□□ 0.42
CDK5RAP3-215ENST00000579780 COL4A4P53420 1690 aaPredicted RBP17.7■□□□□ 0.42
CDK5RAP3-215ENST00000579780 NCANO14594 1321 aa17.7■□□□□ 0.42
CDK5RAP3-215ENST00000579780 ANKRD62A6NC57 917 aa17.69■□□□□ 0.42
CDK5RAP3-215ENST00000579780 GOLGA6L9A6NEM1 432 aa17.69■□□□□ 0.42
CDK5RAP3-215ENST00000579780 XPO1O14980 1071 aaKnown RBP17.69■□□□□ 0.42
CDK5RAP3-215ENST00000579780 OR4Q2P0C623 313 aa17.69■□□□□ 0.42
CDK5RAP3-215ENST00000579780 TMEM253P0C7T8 217 aa17.69■□□□□ 0.42
CDK5RAP3-215ENST00000579780 MYBL1P10243 752 aa17.69■□□□□ 0.42
CDK5RAP3-215ENST00000579780 CPB1P15086 417 aa17.69■□□□□ 0.42
CDK5RAP3-215ENST00000579780 MMP8P22894 467 aa17.69■□□□□ 0.42
CDK5RAP3-215ENST00000579780 PLA2G4AP47712 749 aa17.69■□□□□ 0.42
CDK5RAP3-215ENST00000579780 GSCP56915 257 aaPredicted RBP17.69■□□□□ 0.42
CDK5RAP3-215ENST00000579780 SLC8A3P57103 927 aa17.69■□□□□ 0.42
CDK5RAP3-215ENST00000579780 TAP1Q03518 808 aa17.69■□□□□ 0.42
CDK5RAP3-215ENST00000579780 C1QBPQ07021 282 aaKnown RBP17.69■□□□□ 0.42
CDK5RAP3-215ENST00000579780 GPR17Q13304 367 aa17.69■□□□□ 0.42
CDK5RAP3-215ENST00000579780 PTPN14Q15678 1187 aa17.69■□□□□ 0.42
CDK5RAP3-215ENST00000579780 SLC39A12Q504Y0 691 aa17.69■□□□□ 0.42
CDK5RAP3-215ENST00000579780 LRRTM3Q86VH5 581 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms