RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 CXXC1Q9P0U4 656 aaPredicted RBP14.22□□□□□ -0.13
SRSF1-202ENST00000578430 GTF3C4Q9UKN8 822 aa14.22□□□□□ -0.13
SRSF1-202ENST00000578430 TSPAN16Q9UKR8 245 aa14.22□□□□□ -0.13
SRSF1-202ENST00000578430 PCDHB12Q9Y5F1 795 aa14.22□□□□□ -0.13
SRSF1-202ENST00000578430 MRPL42Q9Y6G3 142 aaKnown RBP14.22□□□□□ -0.13
SRSF1-202ENST00000578430 TSC2P49815 1807 aa14.22□□□□□ -0.13
SRSF1-202ENST00000578430 NCANO14594 1321 aa14.21□□□□□ -0.13
SRSF1-202ENST00000578430 TMCO5BA8MYB1 307 aa14.21□□□□□ -0.13
SRSF1-202ENST00000578430 KIF5CO60282 957 aa14.21□□□□□ -0.13
SRSF1-202ENST00000578430 CALB1P05937 261 aa14.21□□□□□ -0.13
SRSF1-202ENST00000578430 CFHP08603 1231 aa14.21□□□□□ -0.13
SRSF1-202ENST00000578430 MMP8P22894 467 aa14.21□□□□□ -0.13
SRSF1-202ENST00000578430 TKTP29401 623 aaKnown RBP14.21□□□□□ -0.13
SRSF1-202ENST00000578430 GPD2P43304 727 aa14.21□□□□□ -0.13
SRSF1-202ENST00000578430 PLCB3Q01970 1234 aa14.21□□□□□ -0.13
SRSF1-202ENST00000578430 BST2Q10589 180 aaKnown RBP14.21□□□□□ -0.13
SRSF1-202ENST00000578430 SMARCB1Q12824 385 aa14.21□□□□□ -0.13
SRSF1-202ENST00000578430 USP41Q3LFD5 358 aa14.21□□□□□ -0.13
SRSF1-202ENST00000578430 PKDCCQ504Y2 493 aa14.21□□□□□ -0.13
SRSF1-202ENST00000578430 VARS2Q5ST30 1063 aaKnown RBP14.21□□□□□ -0.13
SRSF1-202ENST00000578430 ZNF280DQ6N043 979 aa14.21□□□□□ -0.13
SRSF1-202ENST00000578430 NYAP1Q6ZVC0 841 aa14.21□□□□□ -0.13
SRSF1-202ENST00000578430 ERICH1Q86X53 443 aa14.21□□□□□ -0.13
SRSF1-202ENST00000578430 PASD1Q8IV76 773 aa14.21□□□□□ -0.13
SRSF1-202ENST00000578430 GPR65Q8IYL9 337 aa14.21□□□□□ -0.13
SRSF1-202ENST00000578430 RNF168Q8IYW5 571 aaPredicted RBP14.21□□□□□ -0.13
SRSF1-202ENST00000578430 DCP1BQ8IZD4 617 aaKnown RBP14.21□□□□□ -0.13
SRSF1-202ENST00000578430 MCOLN2Q8IZK6 566 aa14.21□□□□□ -0.13
SRSF1-202ENST00000578430 C12orf29Q8N999 325 aa14.21□□□□□ -0.13
SRSF1-202ENST00000578430 CPA5Q8WXQ8 436 aa14.21□□□□□ -0.13
SRSF1-202ENST00000578430 RFFLQ8WZ73 363 aa14.21□□□□□ -0.13
SRSF1-202ENST00000578430 CLP1Q92989 425 aaKnown RBP14.21□□□□□ -0.13
SRSF1-202ENST00000578430 TMEM169Q96HH4 297 aa14.21□□□□□ -0.13
SRSF1-202ENST00000578430 GDF15Q99988 308 aa14.21□□□□□ -0.13
SRSF1-202ENST00000578430 RTP3Q9BQQ7 232 aa14.21□□□□□ -0.13
SRSF1-202ENST00000578430 TTPALQ9BTX7 342 aa14.21□□□□□ -0.13
SRSF1-202ENST00000578430 GPR62Q9BZJ7 368 aa14.21□□□□□ -0.13
SRSF1-202ENST00000578430 ADAM22Q9P0K1 906 aa14.21□□□□□ -0.13
SRSF1-202ENST00000578430 HCSTQ9UBK5 93 aa14.21□□□□□ -0.13
SRSF1-202ENST00000578430 STRIP2Q9ULQ0 834 aa14.21□□□□□ -0.13
SRSF1-202ENST00000578430 RWDD3Q9Y3V2 267 aa14.21□□□□□ -0.13
SRSF1-202ENST00000578430 PTPRSQ13332 1948 aa14.21□□□□□ -0.14
SRSF1-202ENST00000578430 NT5C1B-RDH14C9J2C7 533 aa14.2□□□□□ -0.14
SRSF1-202ENST00000578430 CYP1A2P05177 515 aa14.2□□□□□ -0.14
SRSF1-202ENST00000578430 ACAT1P24752 427 aaKnown RBP14.2□□□□□ -0.14
SRSF1-202ENST00000578430 HADHBP55084 474 aaKnown RBP14.2□□□□□ -0.14
SRSF1-202ENST00000578430 NFE2Q16621 373 aaPredicted RBP14.2□□□□□ -0.14
SRSF1-202ENST00000578430 MDH1BQ5I0G3 518 aa14.2□□□□□ -0.14
SRSF1-202ENST00000578430 C4orf50Q6ZRC1 276 aa14.2□□□□□ -0.14
SRSF1-202ENST00000578430 MON1BQ7L1V2 547 aa14.2□□□□□ -0.14
SRSF1-202ENST00000578430 TMCO2Q7Z6W1 182 aaPredicted RBP14.2□□□□□ -0.14
SRSF1-202ENST00000578430 FUKQ8N0W3 1084 aa14.2□□□□□ -0.14
SRSF1-202ENST00000578430 WDTC1Q8N5D0 677 aa14.2□□□□□ -0.14
SRSF1-202ENST00000578430 C1orf131Q8NDD1 294 aaKnown RBP14.2□□□□□ -0.14
SRSF1-202ENST00000578430 SLC2A14Q8TDB8 520 aa14.2□□□□□ -0.14
SRSF1-202ENST00000578430 UBE2Q2Q8WVN8 375 aa14.2□□□□□ -0.14
SRSF1-202ENST00000578430 SECISBP2LQ93073 1101 aaKnown RBP14.2□□□□□ -0.14
SRSF1-202ENST00000578430 PKMYT1Q99640 499 aa14.2□□□□□ -0.14
SRSF1-202ENST00000578430 PACSIN1Q9BY11 444 aa14.2□□□□□ -0.14
SRSF1-202ENST00000578430 ZCWPW1Q9H0M4 648 aa14.2□□□□□ -0.14
SRSF1-202ENST00000578430 CRTAC1Q9NQ79 661 aa14.2□□□□□ -0.14
SRSF1-202ENST00000578430 FAM49BQ9NUQ9 324 aa14.2□□□□□ -0.14
SRSF1-202ENST00000578430 WDR35Q9P2L0 1181 aa14.2□□□□□ -0.14
SRSF1-202ENST00000578430 UVRAGQ9P2Y5 699 aa14.2□□□□□ -0.14
SRSF1-202ENST00000578430 GUCA1BQ9UMX6 200 aa14.2□□□□□ -0.14
SRSF1-202ENST00000578430 HCRTO43612 131 aa14.19□□□□□ -0.14
SRSF1-202ENST00000578430 TLL1O43897 1013 aa14.19□□□□□ -0.14
SRSF1-202ENST00000578430 ATP2C2O75185 946 aa14.19□□□□□ -0.14
SRSF1-202ENST00000578430 GABBR2O75899 941 aa14.19□□□□□ -0.14
SRSF1-202ENST00000578430 MTA2O94776 668 aa14.19□□□□□ -0.14
SRSF1-202ENST00000578430 SOD2P04179 222 aa14.19□□□□□ -0.14
SRSF1-202ENST00000578430 CCDC130P13994 396 aa14.19□□□□□ -0.14
SRSF1-202ENST00000578430 ABCB4P21439 1286 aa14.19□□□□□ -0.14
SRSF1-202ENST00000578430 PBX3P40426 434 aa14.19□□□□□ -0.14
SRSF1-202ENST00000578430 MAGEA10P43363 369 aaPredicted RBP14.19□□□□□ -0.14
SRSF1-202ENST00000578430 ACADSBP45954 432 aa14.19□□□□□ -0.14
SRSF1-202ENST00000578430 GABRB2P47870 512 aa14.19□□□□□ -0.14
SRSF1-202ENST00000578430 GSCP56915 257 aaPredicted RBP14.19□□□□□ -0.14
SRSF1-202ENST00000578430 PSMC1P62191 440 aaKnown RBP14.19□□□□□ -0.14
SRSF1-202ENST00000578430 ETF1P62495 437 aaKnown RBP14.19□□□□□ -0.14
SRSF1-202ENST00000578430 KRT17Q04695 432 aa14.19□□□□□ -0.14
SRSF1-202ENST00000578430 PTP4A2Q12974 167 aa14.19□□□□□ -0.14
SRSF1-202ENST00000578430 CTXN3Q4LDR2 81 aa14.19□□□□□ -0.14
SRSF1-202ENST00000578430 KIAA0319Q5VV43 1072 aa14.19□□□□□ -0.14
SRSF1-202ENST00000578430 DDX53Q86TM3 631 aaKnown RBP14.19□□□□□ -0.14
SRSF1-202ENST00000578430 TTC30AQ86WT1 665 aa14.19□□□□□ -0.14
SRSF1-202ENST00000578430 TRIM58Q8NG06 486 aa14.19□□□□□ -0.14
SRSF1-202ENST00000578430 IPO4Q8TEX9 1081 aaKnown RBP14.19□□□□□ -0.14
SRSF1-202ENST00000578430 BCL7CQ8WUZ0 217 aaPredicted RBP14.19□□□□□ -0.14
SRSF1-202ENST00000578430 SLC35F5Q8WV83 523 aa14.19□□□□□ -0.14
SRSF1-202ENST00000578430 PIK3R5Q8WYR1 880 aa14.19□□□□□ -0.14
SRSF1-202ENST00000578430 ZNF653Q96CK0 615 aa14.19□□□□□ -0.14
SRSF1-202ENST00000578430 FUBP3Q96I24 572 aaKnown RBP eCLIP14.19□□□□□ -0.14
SRSF1-202ENST00000578430 HSFY1Q96LI6 401 aa14.19□□□□□ -0.14
SRSF1-202ENST00000578430 MED10Q9BTT4 135 aa14.19□□□□□ -0.14
SRSF1-202ENST00000578430 HERC2P3Q9BVR0 1158 aa14.19□□□□□ -0.14
SRSF1-202ENST00000578430 DUSP16Q9BY84 665 aa14.19□□□□□ -0.14
SRSF1-202ENST00000578430 B3GNT5Q9BYG0 378 aa14.19□□□□□ -0.14
SRSF1-202ENST00000578430 UBXN6Q9BZV1 441 aa14.19□□□□□ -0.14
SRSF1-202ENST00000578430 THAP2Q9H0W7 228 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms