RNA–Protein interactions for RNA: ENST00000577572.5

SS18-206, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 510 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-206ENST00000577572 TBC1D4O60343 1298 aa16.17■□□□□ 0.18
SS18-206ENST00000577572 MTA2O94776 668 aa16.17■□□□□ 0.18
SS18-206ENST00000577572 SOD2P04179 222 aa16.17■□□□□ 0.18
SS18-206ENST00000577572 CYP1A2P05177 515 aa16.17■□□□□ 0.18
SS18-206ENST00000577572 ACADSBP45954 432 aa16.17■□□□□ 0.18
SS18-206ENST00000577572 GABRB2P47870 512 aa16.17■□□□□ 0.18
SS18-206ENST00000577572 RPL34P49207 117 aaKnown RBP16.17■□□□□ 0.18
SS18-206ENST00000577572 CREMQ03060 361 aa16.17■□□□□ 0.18
SS18-206ENST00000577572 TAP1Q03518 808 aa16.17■□□□□ 0.18
SS18-206ENST00000577572 KRT17Q04695 432 aa16.17■□□□□ 0.18
SS18-206ENST00000577572 BST2Q10589 180 aaKnown RBP16.17■□□□□ 0.18
SS18-206ENST00000577572 PTPN14Q15678 1187 aa16.17■□□□□ 0.18
SS18-206ENST00000577572 MON1BQ7L1V2 547 aa16.17■□□□□ 0.18
SS18-206ENST00000577572 ERICH1Q86X53 443 aa16.17■□□□□ 0.18
SS18-206ENST00000577572 ZDHHC17Q8IUH5 632 aa16.17■□□□□ 0.18
SS18-206ENST00000577572 FUKQ8N0W3 1084 aa16.17■□□□□ 0.18
SS18-206ENST00000577572 SLC35F5Q8WV83 523 aa16.17■□□□□ 0.18
SS18-206ENST00000577572 PIK3R5Q8WYR1 880 aa16.17■□□□□ 0.18
SS18-206ENST00000577572 HERC2P3Q9BVR0 1158 aa16.17■□□□□ 0.18
SS18-206ENST00000577572 DUSP16Q9BY84 665 aa16.17■□□□□ 0.18
SS18-206ENST00000577572 LACRTQ9GZZ8 138 aa16.17■□□□□ 0.18
SS18-206ENST00000577572 ZCWPW1Q9H0M4 648 aa16.17■□□□□ 0.18
SS18-206ENST00000577572 DPEP3Q9H4B8 488 aa16.17■□□□□ 0.18
SS18-206ENST00000577572 ABCB6Q9NP58 842 aa16.17■□□□□ 0.18
SS18-206ENST00000577572 PNPLA8Q9NP80 782 aa16.17■□□□□ 0.18
SS18-206ENST00000577572 TAS2R14Q9NYV8 317 aa16.17■□□□□ 0.18
SS18-206ENST00000577572 ADAM22Q9P0K1 906 aa16.17■□□□□ 0.18
SS18-206ENST00000577572 TIMM13Q9Y5L4 95 aaPredicted RBP16.17■□□□□ 0.18
SS18-206ENST00000577572 SCINQ9Y6U3 715 aa16.17■□□□□ 0.18
SS18-206ENST00000577572 USP27XA6NNY8 438 aa16.16■□□□□ 0.18
SS18-206ENST00000577572 F8W810 466 aa16.16■□□□□ 0.18
SS18-206ENST00000577572 XPO1O14980 1071 aaKnown RBP16.16■□□□□ 0.18
SS18-206ENST00000577572 TKTP29401 623 aaKnown RBP16.16■□□□□ 0.18
SS18-206ENST00000577572 ETF1P62495 437 aaKnown RBP16.16■□□□□ 0.18
SS18-206ENST00000577572 ORC1Q13415 861 aa16.16■□□□□ 0.18
SS18-206ENST00000577572 GOLGA7BQ2TAP0 167 aa16.16■□□□□ 0.18
SS18-206ENST00000577572 CFAP221Q4G0U5 840 aa16.16■□□□□ 0.18
SS18-206ENST00000577572 FAM117BQ6P1L5 589 aa16.16■□□□□ 0.18
SS18-206ENST00000577572 DENND1BQ6P3S1 775 aa16.16■□□□□ 0.18
SS18-206ENST00000577572 WDTC1Q8N5D0 677 aa16.16■□□□□ 0.18
SS18-206ENST00000577572 TRIM58Q8NG06 486 aa16.16■□□□□ 0.18
SS18-206ENST00000577572 SLC2A14Q8TDB8 520 aa16.16■□□□□ 0.18
SS18-206ENST00000577572 IPO4Q8TEX9 1081 aaKnown RBP16.16■□□□□ 0.18
SS18-206ENST00000577572 CPA5Q8WXQ8 436 aa16.16■□□□□ 0.18
SS18-206ENST00000577572 SECISBP2LQ93073 1101 aaKnown RBP16.16■□□□□ 0.18
SS18-206ENST00000577572 SMARCD1Q96GM5 515 aa16.16■□□□□ 0.18
SS18-206ENST00000577572 CEP295NLQ96MC4 621 aa16.16■□□□□ 0.18
SS18-206ENST00000577572 SAMD11Q96NU1 681 aa16.16■□□□□ 0.18
SS18-206ENST00000577572 SLC4A5Q9BY07 1137 aa16.16■□□□□ 0.18
SS18-206ENST00000577572 LZTFL1Q9NQ48 299 aa16.16■□□□□ 0.18
SS18-206ENST00000577572 CRTAC1Q9NQ79 661 aa16.16■□□□□ 0.18
SS18-206ENST00000577572 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.16■□□□□ 0.18
SS18-206ENST00000577572 MAFFQ9ULX9 164 aa16.16■□□□□ 0.18
SS18-206ENST00000577572 LZTS1Q9Y250 596 aa16.16■□□□□ 0.18
SS18-206ENST00000577572 MYBPHLA2RUH7 354 aa16.15■□□□□ 0.18
SS18-206ENST00000577572 RCCD1A6NED2 376 aa16.15■□□□□ 0.18
SS18-206ENST00000577572 TMCO5BA8MYB1 307 aa16.15■□□□□ 0.18
SS18-206ENST00000577572 RB1P06400 928 aa16.15■□□□□ 0.18
SS18-206ENST00000577572 FAM200BP0CF97 657 aa16.15■□□□□ 0.18
SS18-206ENST00000577572 NPR3P17342 541 aa16.15■□□□□ 0.18
SS18-206ENST00000577572 SCNN1AP37088 669 aa16.15■□□□□ 0.18
SS18-206ENST00000577572 MAGEA10P43363 369 aaPredicted RBP16.15■□□□□ 0.18
SS18-206ENST00000577572 PLA2G4AP47712 749 aa16.15■□□□□ 0.18
SS18-206ENST00000577572 DSG1Q02413 1049 aa16.15■□□□□ 0.18
SS18-206ENST00000577572 UBE3AQ05086 875 aa16.15■□□□□ 0.18
SS18-206ENST00000577572 PTP4A2Q12974 167 aa16.15■□□□□ 0.18
SS18-206ENST00000577572 PDCLQ13371 301 aa16.15■□□□□ 0.18
SS18-206ENST00000577572 ZNF268Q14587 947 aaPredicted RBP16.15■□□□□ 0.18
SS18-206ENST00000577572 CTXN3Q4LDR2 81 aa16.15■□□□□ 0.18
SS18-206ENST00000577572 MDH1BQ5I0G3 518 aa16.15■□□□□ 0.18
SS18-206ENST00000577572 KIAA0319Q5VV43 1072 aa16.15■□□□□ 0.18
SS18-206ENST00000577572 SLC8B1Q6J4K2 584 aa16.15■□□□□ 0.18
SS18-206ENST00000577572 VSTM1Q6UX27 236 aa16.15■□□□□ 0.18
SS18-206ENST00000577572 TMEM110Q86TL2 294 aa16.15■□□□□ 0.18
SS18-206ENST00000577572 PASD1Q8IV76 773 aa16.15■□□□□ 0.18
SS18-206ENST00000577572 C1orf131Q8NDD1 294 aaKnown RBP16.15■□□□□ 0.18
SS18-206ENST00000577572 OR10T2Q8NGX3 314 aa16.15■□□□□ 0.18
SS18-206ENST00000577572 KCTD13Q8WZ19 329 aa16.15■□□□□ 0.18
SS18-206ENST00000577572 C18orf8Q96DM3 657 aa16.15■□□□□ 0.18
SS18-206ENST00000577572 PCED1BQ96HM7 432 aa16.15■□□□□ 0.18
SS18-206ENST00000577572 ALS2CR12Q96Q35 445 aa16.15■□□□□ 0.18
SS18-206ENST00000577572 THAP2Q9H0W7 228 aa16.15■□□□□ 0.18
SS18-206ENST00000577572 CSNK1G1Q9HCP0 422 aa16.15■□□□□ 0.18
SS18-206ENST00000577572 FAM49BQ9NUQ9 324 aa16.15■□□□□ 0.18
SS18-206ENST00000577572 PARVAQ9NVD7 372 aa16.15■□□□□ 0.18
SS18-206ENST00000577572 HSFX1Q9UBD0 423 aa16.15■□□□□ 0.18
SS18-206ENST00000577572 MTRRQ9UBK8 725 aa16.15■□□□□ 0.18
SS18-206ENST00000577572 NT5C1B-RDH14C9J2C7 533 aa16.14■□□□□ 0.17
SS18-206ENST00000577572 CALCAP01258 141 aa16.14■□□□□ 0.17
SS18-206ENST00000577572 CFHP08603 1231 aa16.14■□□□□ 0.17
SS18-206ENST00000577572 ACAT1P24752 427 aaKnown RBP16.14■□□□□ 0.17
SS18-206ENST00000577572 MAGEA11P43364 429 aa16.14■□□□□ 0.17
SS18-206ENST00000577572 PSMC1P62191 440 aaKnown RBP16.14■□□□□ 0.17
SS18-206ENST00000577572 GPR17Q13304 367 aa16.14■□□□□ 0.17
SS18-206ENST00000577572 PLEKHA7Q6IQ23 1121 aa16.14■□□□□ 0.17
SS18-206ENST00000577572 KIAA1841Q6NSI8 718 aa16.14■□□□□ 0.17
SS18-206ENST00000577572 PAQR9Q6ZVX9 377 aa16.14■□□□□ 0.17
SS18-206ENST00000577572 TTC30AQ86WT1 665 aa16.14■□□□□ 0.17
SS18-206ENST00000577572 TMEM173Q86WV6 379 aaPredicted RBP16.14■□□□□ 0.17
SS18-206ENST00000577572 CEP57Q86XR8 500 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms