RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 ANXA11P50995 505 aaKnown RBP3.29□□□□□ -1.88
TOP2A-202ENST00000577541 ZNF280AP59817 542 aaPredicted RBP3.29□□□□□ -1.88
TOP2A-202ENST00000577541 KIF23Q02241 960 aaPredicted RBP3.29□□□□□ -1.88
TOP2A-202ENST00000577541 DYRK1AQ13627 763 aa3.29□□□□□ -1.88
TOP2A-202ENST00000577541 IL10RAQ13651 578 aa3.29□□□□□ -1.88
TOP2A-202ENST00000577541 RBMS2Q15434 407 aaKnown RBP3.29□□□□□ -1.88
TOP2A-202ENST00000577541 TRIM71Q2Q1W2 868 aaKnown RBP3.29□□□□□ -1.88
TOP2A-202ENST00000577541 C9orf50Q5SZB4 431 aa3.29□□□□□ -1.88
TOP2A-202ENST00000577541 UTP14CQ5TAP6 766 aaKnown RBP3.29□□□□□ -1.88
TOP2A-202ENST00000577541 EFCAB2Q5VUJ9 269 aa3.29□□□□□ -1.88
TOP2A-202ENST00000577541 SLC29A4Q7RTT9 530 aa3.29□□□□□ -1.88
TOP2A-202ENST00000577541 RSPH3Q86UC2 560 aa3.29□□□□□ -1.88
TOP2A-202ENST00000577541 FAM90A1Q86YD7 464 aa3.29□□□□□ -1.88
TOP2A-202ENST00000577541 FANCBQ8NB91 859 aa3.29□□□□□ -1.88
TOP2A-202ENST00000577541 DNASE2BQ8WZ79 361 aa3.29□□□□□ -1.88
TOP2A-202ENST00000577541 MTMR8Q96EF0 704 aa3.29□□□□□ -1.88
TOP2A-202ENST00000577541 TLR10Q9BXR5 811 aa3.29□□□□□ -1.88
TOP2A-202ENST00000577541 FOXP1Q9H334 677 aaPredicted RBP3.29□□□□□ -1.88
TOP2A-202ENST00000577541 GPR35Q9HC97 309 aa3.29□□□□□ -1.88
TOP2A-202ENST00000577541 MAN1C1Q9NR34 630 aa3.29□□□□□ -1.88
TOP2A-202ENST00000577541 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.29□□□□□ -1.88
TOP2A-202ENST00000577541 COL4A3BPQ9Y5P4 624 aa3.29□□□□□ -1.88
TOP2A-202ENST00000577541 NR2E3Q9Y5X4 410 aa3.29□□□□□ -1.88
TOP2A-202ENST00000577541 SPATA31A3Q5VYP0 1347 aa3.28□□□□□ -1.88
TOP2A-202ENST00000577541 CCDC195A0A1B0GUA6 201 aa3.28□□□□□ -1.88
TOP2A-202ENST00000577541 E9PLN8 166 aa3.28□□□□□ -1.88
TOP2A-202ENST00000577541 F2RL2O00254 374 aa3.28□□□□□ -1.88
TOP2A-202ENST00000577541 XPOTO43592 962 aaKnown RBP3.28□□□□□ -1.88
TOP2A-202ENST00000577541 PRF1P14222 555 aa3.28□□□□□ -1.88
TOP2A-202ENST00000577541 MALP21145 153 aa3.28□□□□□ -1.88
TOP2A-202ENST00000577541 LPOP22079 712 aaPredicted RBP3.28□□□□□ -1.88
TOP2A-202ENST00000577541 CDKN2AP42771 156 aaKnown RBP3.28□□□□□ -1.88
TOP2A-202ENST00000577541 PIGFQ07326 219 aa3.28□□□□□ -1.88
TOP2A-202ENST00000577541 ACAP2Q15057 778 aa3.28□□□□□ -1.88
TOP2A-202ENST00000577541 ZNF585BQ52M93 769 aa3.28□□□□□ -1.88
TOP2A-202ENST00000577541 SLC4A10Q6U841 1118 aa3.28□□□□□ -1.88
TOP2A-202ENST00000577541 NPNTQ6UXI9 565 aa3.28□□□□□ -1.88
TOP2A-202ENST00000577541 CFAP52Q8N1V2 620 aa3.28□□□□□ -1.88
TOP2A-202ENST00000577541 TMIEQ8NEW7 156 aa3.28□□□□□ -1.88
TOP2A-202ENST00000577541 ZCRB1Q8TBF4 217 aaKnown RBP3.28□□□□□ -1.88
TOP2A-202ENST00000577541 POC1BQ8TC44 478 aa3.28□□□□□ -1.88
TOP2A-202ENST00000577541 SCAMP4Q969E2 229 aa3.28□□□□□ -1.88
TOP2A-202ENST00000577541 CLPTM1LQ96KA5 538 aa3.28□□□□□ -1.88
TOP2A-202ENST00000577541 NUP88Q99567 741 aaPredicted RBP3.28□□□□□ -1.88
TOP2A-202ENST00000577541 VKORC1Q9BQB6 163 aa3.28□□□□□ -1.88
TOP2A-202ENST00000577541 ALG8Q9BVK2 526 aa3.28□□□□□ -1.88
TOP2A-202ENST00000577541 PACSIN1Q9BY11 444 aa3.28□□□□□ -1.88
TOP2A-202ENST00000577541 TYW1Q9NV66 732 aaKnown RBP3.28□□□□□ -1.88
TOP2A-202ENST00000577541 POLHQ9Y253 713 aa3.28□□□□□ -1.88
TOP2A-202ENST00000577541 TRIP12Q14669 1992 aaPredicted RBP3.28□□□□□ -1.88
TOP2A-202ENST00000577541 PRSS29PA6NIE9 313 aa3.27□□□□□ -1.89
TOP2A-202ENST00000577541 ADAM10O14672 748 aa3.27□□□□□ -1.89
TOP2A-202ENST00000577541 CHEK2O96017 543 aa3.27□□□□□ -1.89
TOP2A-202ENST00000577541 IGKV3-20P01619 116 aa3.27□□□□□ -1.89
TOP2A-202ENST00000577541 RHOP08100 348 aa3.27□□□□□ -1.89
TOP2A-202ENST00000577541 ZFXP17010 805 aaPredicted RBP3.27□□□□□ -1.89
TOP2A-202ENST00000577541 PCSK6P29122 969 aa3.27□□□□□ -1.89
TOP2A-202ENST00000577541 PRDX5P30044 214 aa3.27□□□□□ -1.89
TOP2A-202ENST00000577541 HK3P52790 923 aa3.27□□□□□ -1.89
TOP2A-202ENST00000577541 ZNF844Q08AG5 666 aa3.27□□□□□ -1.89
TOP2A-202ENST00000577541 SNAPC2Q13487 334 aa3.27□□□□□ -1.89
TOP2A-202ENST00000577541 KIF22Q14807 665 aa3.27□□□□□ -1.89
TOP2A-202ENST00000577541 PTPN21Q16825 1174 aa3.27□□□□□ -1.89
TOP2A-202ENST00000577541 CCDC93Q567U6 631 aa3.27□□□□□ -1.89
TOP2A-202ENST00000577541 LVRNQ6Q4G3 990 aa3.27□□□□□ -1.89
TOP2A-202ENST00000577541 PPP1R32Q7Z5V6 425 aa3.27□□□□□ -1.89
TOP2A-202ENST00000577541 ADGRG5Q8IZF4 528 aa3.27□□□□□ -1.89
TOP2A-202ENST00000577541 FAM109AQ8N4B1 249 aa3.27□□□□□ -1.89
TOP2A-202ENST00000577541 CPA6Q8N4T0 437 aa3.27□□□□□ -1.89
TOP2A-202ENST00000577541 PNLDC1Q8NA58 520 aaKnown RBP3.27□□□□□ -1.89
TOP2A-202ENST00000577541 TBC1D5Q92609 795 aa3.27□□□□□ -1.89
TOP2A-202ENST00000577541 KAT5Q92993 513 aa3.27□□□□□ -1.89
TOP2A-202ENST00000577541 LRIG1Q96JA1 1093 aa3.27□□□□□ -1.89
TOP2A-202ENST00000577541 FAM167AQ96KS9 214 aa3.27□□□□□ -1.89
TOP2A-202ENST00000577541 OSBPL9Q96SU4 736 aa3.27□□□□□ -1.89
TOP2A-202ENST00000577541 GNL3LQ9NVN8 582 aaKnown RBP3.27□□□□□ -1.89
TOP2A-202ENST00000577541 ETAA1Q9NY74 926 aa3.27□□□□□ -1.89
TOP2A-202ENST00000577541 ZDHHC8Q9ULC8 765 aa3.27□□□□□ -1.89
TOP2A-202ENST00000577541 H3BNX3 289 aa3.26□□□□□ -1.89
TOP2A-202ENST00000577541 SOAT2O75908 522 aa3.26□□□□□ -1.89
TOP2A-202ENST00000577541 POU2F2P09086 479 aa3.26□□□□□ -1.89
TOP2A-202ENST00000577541 JUPP14923 745 aa3.26□□□□□ -1.89
TOP2A-202ENST00000577541 NDUFB7P17568 137 aa3.26□□□□□ -1.89
TOP2A-202ENST00000577541 AKAP5P24588 427 aa3.26□□□□□ -1.89
TOP2A-202ENST00000577541 PREPLQ4J6C6 727 aaPredicted RBP3.26□□□□□ -1.89
TOP2A-202ENST00000577541 BRDTQ58F21 947 aaPredicted RBP3.26□□□□□ -1.89
TOP2A-202ENST00000577541 LCE1FQ5T754 118 aa3.26□□□□□ -1.89
TOP2A-202ENST00000577541 THEMIS2Q5TEJ8 643 aa3.26□□□□□ -1.89
TOP2A-202ENST00000577541 EMC10Q5UCC4 262 aa3.26□□□□□ -1.89
TOP2A-202ENST00000577541 GADL1Q6ZQY3 521 aa3.26□□□□□ -1.89
TOP2A-202ENST00000577541 USP45Q70EL2 814 aa3.26□□□□□ -1.89
TOP2A-202ENST00000577541 ZNF551Q7Z340 670 aaPredicted RBP3.26□□□□□ -1.89
TOP2A-202ENST00000577541 PNMA8AQ86V59 439 aaPredicted RBP3.26□□□□□ -1.89
TOP2A-202ENST00000577541 CHSY1Q86X52 802 aa3.26□□□□□ -1.89
TOP2A-202ENST00000577541 MIER2Q8N344 545 aa3.26□□□□□ -1.89
TOP2A-202ENST00000577541 AOPEPQ8N6M6 819 aa3.26□□□□□ -1.89
TOP2A-202ENST00000577541 C3orf20Q8ND61 904 aa3.26□□□□□ -1.89
TOP2A-202ENST00000577541 SNX19Q92543 992 aa3.26□□□□□ -1.89
TOP2A-202ENST00000577541 RAB24Q969Q5 203 aa3.26□□□□□ -1.89
TOP2A-202ENST00000577541 CHMP4CQ96CF2 233 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms