RNA–Protein interactions for RNA: ENST00000577197.1

TSEN54-204, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-204ENST00000577197 ABL1P00519 1130 aa13.17□□□□□ -0.3
TSEN54-204ENST00000577197 PTPN1P18031 435 aaKnown RBP13.17□□□□□ -0.3
TSEN54-204ENST00000577197 MAN1A1P33908 653 aa13.17□□□□□ -0.3
TSEN54-204ENST00000577197 ACADSBP45954 432 aa13.17□□□□□ -0.3
TSEN54-204ENST00000577197 PLA2G4AP47712 749 aa13.17□□□□□ -0.3
TSEN54-204ENST00000577197 GATMP50440 423 aa13.17□□□□□ -0.3
TSEN54-204ENST00000577197 BTG3Q14201 252 aaPredicted RBP13.17□□□□□ -0.3
TSEN54-204ENST00000577197 FAM171BQ6P995 826 aa13.17□□□□□ -0.3
TSEN54-204ENST00000577197 TMCO2Q7Z6W1 182 aaPredicted RBP13.17□□□□□ -0.3
TSEN54-204ENST00000577197 ACOT1Q86TX2 421 aa13.17□□□□□ -0.3
TSEN54-204ENST00000577197 ERICH1Q86X53 443 aa13.17□□□□□ -0.3
TSEN54-204ENST00000577197 ZNF280BQ86YH2 543 aa13.17□□□□□ -0.3
TSEN54-204ENST00000577197 GPIHBP1Q8IV16 184 aa13.17□□□□□ -0.3
TSEN54-204ENST00000577197 SLC35F6Q8N357 371 aa13.17□□□□□ -0.3
TSEN54-204ENST00000577197 WDTC1Q8N5D0 677 aa13.17□□□□□ -0.3
TSEN54-204ENST00000577197 MYCBPAPQ8TBZ2 947 aa13.17□□□□□ -0.3
TSEN54-204ENST00000577197 SP7Q8TDD2 431 aaPredicted RBP13.17□□□□□ -0.3
TSEN54-204ENST00000577197 IPO4Q8TEX9 1081 aaKnown RBP13.17□□□□□ -0.3
TSEN54-204ENST00000577197 ATRIPQ8WXE1 791 aa13.17□□□□□ -0.3
TSEN54-204ENST00000577197 PAAF1Q9BRP4 392 aa13.17□□□□□ -0.3
TSEN54-204ENST00000577197 SLC4A5Q9BY07 1137 aa13.17□□□□□ -0.3
TSEN54-204ENST00000577197 ABCB6Q9NP58 842 aa13.17□□□□□ -0.3
TSEN54-204ENST00000577197 DDX43Q9NXZ2 648 aaKnown RBP13.17□□□□□ -0.3
TSEN54-204ENST00000577197 RNF14Q9UBS8 474 aa13.17□□□□□ -0.3
TSEN54-204ENST00000577197 TRIM10Q9UDY6 481 aa13.17□□□□□ -0.3
TSEN54-204ENST00000577197 CNOT8Q9UFF9 292 aaKnown RBP13.17□□□□□ -0.3
TSEN54-204ENST00000577197 SALL4Q9UJQ4 1053 aa13.17□□□□□ -0.3
TSEN54-204ENST00000577197 CAPN6Q9Y6Q1 641 aa13.17□□□□□ -0.3
TSEN54-204ENST00000577197 DUSP10Q9Y6W6 482 aa13.17□□□□□ -0.3
TSEN54-204ENST00000577197 MYH10P35580 1976 aa13.17□□□□□ -0.3
TSEN54-204ENST00000577197 CEP290O15078 2479 aa13.17□□□□□ -0.3
TSEN54-204ENST00000577197 PDE4DIPQ5VU43 2346 aa13.17□□□□□ -0.3
TSEN54-204ENST00000577197 TCRBV5S1A1TA0A578 114 aa13.16□□□□□ -0.3
TSEN54-204ENST00000577197 OR6C75A6NL08 312 aa13.16□□□□□ -0.3
TSEN54-204ENST00000577197 M0QYV0 167 aa13.16□□□□□ -0.3
TSEN54-204ENST00000577197 TCP1P17987 556 aaKnown RBP13.16□□□□□ -0.3
TSEN54-204ENST00000577197 ABCB4P21439 1286 aa13.16□□□□□ -0.3
TSEN54-204ENST00000577197 FGFR3P22607 806 aa13.16□□□□□ -0.3
TSEN54-204ENST00000577197 SLC1A1P43005 524 aa13.16□□□□□ -0.3
TSEN54-204ENST00000577197 TERF1P54274 439 aa13.16□□□□□ -0.3
TSEN54-204ENST00000577197 TUBB4BP68371 445 aa13.16□□□□□ -0.3
TSEN54-204ENST00000577197 TSPY1Q01534 308 aa13.16□□□□□ -0.3
TSEN54-204ENST00000577197 YWHAHQ04917 246 aaPredicted RBP13.16□□□□□ -0.3
TSEN54-204ENST00000577197 PDCLQ13371 301 aa13.16□□□□□ -0.3
TSEN54-204ENST00000577197 MRPL58Q14197 206 aaKnown RBP13.16□□□□□ -0.3
TSEN54-204ENST00000577197 ACAP1Q15027 740 aa13.16□□□□□ -0.3
TSEN54-204ENST00000577197 RAB30Q15771 203 aa13.16□□□□□ -0.3
TSEN54-204ENST00000577197 INTS6LQ5JSJ4 861 aaKnown RBP13.16□□□□□ -0.3
TSEN54-204ENST00000577197 PPP1R26Q5T8A7 1209 aaPredicted RBP13.16□□□□□ -0.3
TSEN54-204ENST00000577197 PRPF38BQ5VTL8 546 aaKnown RBP13.16□□□□□ -0.3
TSEN54-204ENST00000577197 OVOS1Q6IE37 1185 aa13.16□□□□□ -0.3
TSEN54-204ENST00000577197 TMEM110Q86TL2 294 aa13.16□□□□□ -0.3
TSEN54-204ENST00000577197 OSTM1Q86WC4 334 aa13.16□□□□□ -0.3
TSEN54-204ENST00000577197 RNF168Q8IYW5 571 aaPredicted RBP13.16□□□□□ -0.3
TSEN54-204ENST00000577197 SCML4Q8N228 414 aa13.16□□□□□ -0.3
TSEN54-204ENST00000577197 ZNF564Q8TBZ8 553 aaPredicted RBP13.16□□□□□ -0.3
TSEN54-204ENST00000577197 SLC35F5Q8WV83 523 aa13.16□□□□□ -0.3
TSEN54-204ENST00000577197 CPA5Q8WXQ8 436 aa13.16□□□□□ -0.3
TSEN54-204ENST00000577197 KCTD13Q8WZ19 329 aa13.16□□□□□ -0.3
TSEN54-204ENST00000577197 C18orf8Q96DM3 657 aa13.16□□□□□ -0.3
TSEN54-204ENST00000577197 MCRS1Q96EZ8 462 aa13.16□□□□□ -0.3
TSEN54-204ENST00000577197 FUBP3Q96I24 572 aaKnown RBP eCLIP13.16□□□□□ -0.3
TSEN54-204ENST00000577197 CEP295NLQ96MC4 621 aa13.16□□□□□ -0.3
TSEN54-204ENST00000577197 SYT15Q9BQS2 421 aa13.16□□□□□ -0.3
TSEN54-204ENST00000577197 DUSP16Q9BY84 665 aa13.16□□□□□ -0.3
TSEN54-204ENST00000577197 TMEM51Q9NW97 253 aa13.16□□□□□ -0.3
TSEN54-204ENST00000577197 CTTNBP2NLQ9P2B4 639 aa13.16□□□□□ -0.3
TSEN54-204ENST00000577197 FAN1Q9Y2M0 1017 aa13.16□□□□□ -0.3
TSEN54-204ENST00000577197 NME7Q9Y5B8 376 aa13.16□□□□□ -0.3
TSEN54-204ENST00000577197 PCDHA11Q9Y5I1 949 aa13.16□□□□□ -0.3
TSEN54-204ENST00000577197 PTPRSQ13332 1948 aa13.15□□□□□ -0.3
TSEN54-204ENST00000577197 GRID2IPA4D2P6 1211 aa13.15□□□□□ -0.3
TSEN54-204ENST00000577197 TMCO5BA8MYB1 307 aa13.15□□□□□ -0.3
TSEN54-204ENST00000577197 H7C4K7 107 aa13.15□□□□□ -0.3
TSEN54-204ENST00000577197 NRP1O14786 923 aa13.15□□□□□ -0.3
TSEN54-204ENST00000577197 XPO1O14980 1071 aaKnown RBP13.15□□□□□ -0.3
TSEN54-204ENST00000577197 B4GALT3O60512 393 aa13.15□□□□□ -0.3
TSEN54-204ENST00000577197 TADA2AO75478 443 aa13.15□□□□□ -0.3
TSEN54-204ENST00000577197 MOCS3O95396 460 aa13.15□□□□□ -0.3
TSEN54-204ENST00000577197 GALTP07902 379 aa13.15□□□□□ -0.3
TSEN54-204ENST00000577197 NPR3P17342 541 aa13.15□□□□□ -0.3
TSEN54-204ENST00000577197 LAG3P18627 525 aa13.15□□□□□ -0.3
TSEN54-204ENST00000577197 LMO2P25791 158 aa13.15□□□□□ -0.3
TSEN54-204ENST00000577197 PPM1AP35813 382 aa13.15□□□□□ -0.3
TSEN54-204ENST00000577197 NOP2P46087 812 aaKnown RBP13.15□□□□□ -0.3
TSEN54-204ENST00000577197 OR1G1P47890 313 aa13.15□□□□□ -0.3
TSEN54-204ENST00000577197 ALDH7A1P49419 539 aaKnown RBP13.15□□□□□ -0.3
TSEN54-204ENST00000577197 NAP1L1P55209 391 aaKnown RBP13.15□□□□□ -0.3
TSEN54-204ENST00000577197 AMPD2Q01433 879 aa13.15□□□□□ -0.3
TSEN54-204ENST00000577197 MAMLD1Q13495 774 aa13.15□□□□□ -0.3
TSEN54-204ENST00000577197 CLUL1Q15846 466 aa13.15□□□□□ -0.3
TSEN54-204ENST00000577197 NFE2Q16621 373 aaPredicted RBP13.15□□□□□ -0.3
TSEN54-204ENST00000577197 GOLGA7BQ2TAP0 167 aa13.15□□□□□ -0.3
TSEN54-204ENST00000577197 PAN2Q504Q3 1202 aaKnown RBP13.15□□□□□ -0.3
TSEN54-204ENST00000577197 MEI1Q5TIA1 1274 aa13.15□□□□□ -0.3
TSEN54-204ENST00000577197 DENND1BQ6P3S1 775 aa13.15□□□□□ -0.3
TSEN54-204ENST00000577197 C4orf50Q6ZRC1 276 aa13.15□□□□□ -0.3
TSEN54-204ENST00000577197 DCP1BQ8IZD4 617 aaKnown RBP13.15□□□□□ -0.3
TSEN54-204ENST00000577197 TMEM130Q8N3G9 435 aa13.15□□□□□ -0.3
TSEN54-204ENST00000577197 FIBCD1Q8N539 461 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms