RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 C11orf63Q6NUN7 778 aa10.04□□□□□ -0.8
CCDC40-212ENST00000574799 LRRC8BQ6P9F7 803 aa10.04□□□□□ -0.8
CCDC40-212ENST00000574799 ANO5Q75V66 913 aa10.04□□□□□ -0.8
CCDC40-212ENST00000574799 KBTBD2Q8IY47 623 aa10.04□□□□□ -0.8
CCDC40-212ENST00000574799 TCP10LQ8TDR4 215 aa10.04□□□□□ -0.8
CCDC40-212ENST00000574799 CCDC127Q96BQ5 260 aa10.04□□□□□ -0.8
CCDC40-212ENST00000574799 PHF12Q96QT6 1004 aa10.04□□□□□ -0.8
CCDC40-212ENST00000574799 VPS33BQ9H267 617 aa10.04□□□□□ -0.8
CCDC40-212ENST00000574799 ACTL7BQ9Y614 415 aa10.04□□□□□ -0.8
CCDC40-212ENST00000574799 SMIM31A0A1B0GVY4 71 aa10.04□□□□□ -0.8
CCDC40-212ENST00000574799 CYP26A1O43174 497 aa10.04□□□□□ -0.8
CCDC40-212ENST00000574799 PSMD10O75832 226 aa10.04□□□□□ -0.8
CCDC40-212ENST00000574799 INHBAP08476 426 aa10.04□□□□□ -0.8
CCDC40-212ENST00000574799 RALAP11233 206 aa10.04□□□□□ -0.8
CCDC40-212ENST00000574799 SERPINB8P50452 374 aa10.04□□□□□ -0.8
CCDC40-212ENST00000574799 GHRHRQ02643 423 aa10.04□□□□□ -0.8
CCDC40-212ENST00000574799 PPIDQ08752 370 aaKnown RBP10.04□□□□□ -0.8
CCDC40-212ENST00000574799 AP3B2Q13367 1082 aa10.04□□□□□ -0.8
CCDC40-212ENST00000574799 CYTH1Q15438 398 aa10.04□□□□□ -0.8
CCDC40-212ENST00000574799 CNGA3Q16281 694 aa10.04□□□□□ -0.8
CCDC40-212ENST00000574799 TBC1D10BQ4KMP7 808 aaPredicted RBP10.04□□□□□ -0.8
CCDC40-212ENST00000574799 DNAL1Q4LDG9 190 aa10.04□□□□□ -0.8
CCDC40-212ENST00000574799 LPCAT4Q643R3 524 aa10.04□□□□□ -0.8
CCDC40-212ENST00000574799 TMPRSS6Q8IU80 811 aa10.04□□□□□ -0.8
CCDC40-212ENST00000574799 ARID3BQ8IVW6 561 aaPredicted RBP10.04□□□□□ -0.8
CCDC40-212ENST00000574799 LARGE2Q8N3Y3 721 aa10.04□□□□□ -0.8
CCDC40-212ENST00000574799 GCNAQ96QF7 691 aa10.04□□□□□ -0.8
CCDC40-212ENST00000574799 HSD17B14Q9BPX1 270 aa10.04□□□□□ -0.8
CCDC40-212ENST00000574799 KRT82Q9NSB4 513 aa10.04□□□□□ -0.8
CCDC40-212ENST00000574799 APPL1Q9UKG1 709 aa10.04□□□□□ -0.8
CCDC40-212ENST00000574799 CCDC166P0CW27 439 aa10.03□□□□□ -0.8
CCDC40-212ENST00000574799 ARSEP51690 589 aa10.03□□□□□ -0.8
CCDC40-212ENST00000574799 MARSP56192 900 aaKnown RBP10.03□□□□□ -0.8
CCDC40-212ENST00000574799 CDK16Q00536 496 aa10.03□□□□□ -0.8
CCDC40-212ENST00000574799 MOGSQ13724 837 aa10.03□□□□□ -0.8
CCDC40-212ENST00000574799 ODR4Q5SWX8 454 aa10.03□□□□□ -0.8
CCDC40-212ENST00000574799 OTOP1Q7RTM1 612 aa10.03□□□□□ -0.8
CCDC40-212ENST00000574799 ZNF554Q86TJ5 538 aa10.03□□□□□ -0.8
CCDC40-212ENST00000574799 FBXO11Q86XK2 927 aa10.03□□□□□ -0.8
CCDC40-212ENST00000574799 IL31RAQ8NI17 732 aa10.03□□□□□ -0.8
CCDC40-212ENST00000574799 MORC4Q8TE76 937 aa10.03□□□□□ -0.8
CCDC40-212ENST00000574799 DGCR14Q96DF8 476 aaKnown RBP10.03□□□□□ -0.8
CCDC40-212ENST00000574799 ACAP3Q96P50 834 aa10.03□□□□□ -0.8
CCDC40-212ENST00000574799 FAM111AQ96PZ2 611 aa10.03□□□□□ -0.8
CCDC40-212ENST00000574799 RUSC1Q9BVN2 902 aa10.03□□□□□ -0.8
CCDC40-212ENST00000574799 IFT122Q9HBG6 1241 aa10.03□□□□□ -0.8
CCDC40-212ENST00000574799 KLHL11Q9NVR0 708 aa10.03□□□□□ -0.8
CCDC40-212ENST00000574799 SH3GLB1Q9Y371 365 aa10.03□□□□□ -0.8
CCDC40-212ENST00000574799 FRMPD4Q14CM0 1322 aa10.03□□□□□ -0.8
CCDC40-212ENST00000574799 MEI4A8MW99 385 aa10.03□□□□□ -0.8
CCDC40-212ENST00000574799 PENKP01210 267 aaPredicted RBP10.03□□□□□ -0.8
CCDC40-212ENST00000574799 BGNP21810 368 aa10.03□□□□□ -0.8
CCDC40-212ENST00000574799 HIRAP54198 1017 aaPredicted RBP10.03□□□□□ -0.8
CCDC40-212ENST00000574799 BFSP1Q12934 665 aa10.03□□□□□ -0.8
CCDC40-212ENST00000574799 ACAP1Q15027 740 aa10.03□□□□□ -0.8
CCDC40-212ENST00000574799 SYDE1Q6ZW31 735 aaPredicted RBP10.03□□□□□ -0.8
CCDC40-212ENST00000574799 CNBD2Q96M20 576 aa10.03□□□□□ -0.8
CCDC40-212ENST00000574799 KLHL4Q9C0H6 718 aa10.03□□□□□ -0.8
CCDC40-212ENST00000574799 ACP6Q9NPH0 428 aa10.03□□□□□ -0.8
CCDC40-212ENST00000574799 RNASEH1O60930 286 aaKnown RBP10.03□□□□□ -0.8
CCDC40-212ENST00000574799 CHRNB2P17787 502 aa10.03□□□□□ -0.8
CCDC40-212ENST00000574799 CD58P19256 250 aa10.03□□□□□ -0.8
CCDC40-212ENST00000574799 STAT2P52630 851 aa10.03□□□□□ -0.8
CCDC40-212ENST00000574799 PDK3Q15120 406 aa10.03□□□□□ -0.8
CCDC40-212ENST00000574799 MAPK6Q16659 721 aa10.03□□□□□ -0.8
CCDC40-212ENST00000574799 GDPD5Q8WTR4 605 aa10.03□□□□□ -0.8
CCDC40-212ENST00000574799 OXNAD1Q96HP4 312 aaPredicted RBP10.03□□□□□ -0.8
CCDC40-212ENST00000574799 MRPL1Q9BYD6 325 aaKnown RBP10.03□□□□□ -0.8
CCDC40-212ENST00000574799 AAASQ9NRG9 546 aa10.03□□□□□ -0.8
CCDC40-212ENST00000574799 PI4K2BG5E9Z4 385 aa10.02□□□□□ -0.8
CCDC40-212ENST00000574799 DHX15O43143 795 aaKnown RBP10.02□□□□□ -0.8
CCDC40-212ENST00000574799 SLITRK3O94933 977 aa10.02□□□□□ -0.8
CCDC40-212ENST00000574799 MLH1P40692 756 aa10.02□□□□□ -0.8
CCDC40-212ENST00000574799 HSD17B4P51659 736 aa10.02□□□□□ -0.8
CCDC40-212ENST00000574799 YWHAGP61981 247 aaKnown RBP eCLIP10.02□□□□□ -0.8
CCDC40-212ENST00000574799 TMEM62Q0P6H9 643 aa10.02□□□□□ -0.8
CCDC40-212ENST00000574799 KRT81Q14533 505 aa10.02□□□□□ -0.8
CCDC40-212ENST00000574799 C2CD6Q53TS8 623 aa10.02□□□□□ -0.8
CCDC40-212ENST00000574799 MAP3K21Q5TCX8 1036 aa10.02□□□□□ -0.8
CCDC40-212ENST00000574799 FOXR2Q6PJQ5 311 aa10.02□□□□□ -0.8
CCDC40-212ENST00000574799 HOMEZQ8IX15 550 aa10.02□□□□□ -0.8
CCDC40-212ENST00000574799 NMUR2Q9GZQ4 415 aa10.02□□□□□ -0.8
CCDC40-212ENST00000574799 PCDHGA4Q9Y5G9 962 aa10.02□□□□□ -0.8
CCDC40-212ENST00000574799 MROH7Q68CQ1 1323 aa10.02□□□□□ -0.8
CCDC40-212ENST00000574799 EMSYQ7Z589 1322 aa10.02□□□□□ -0.8
CCDC40-212ENST00000574799 FAM237BA0A1B0GVD1 139 aa10.02□□□□□ -0.81
CCDC40-212ENST00000574799 SLC16A3O15427 465 aaKnown RBP10.02□□□□□ -0.81
CCDC40-212ENST00000574799 TPD52L2O43399 206 aaKnown RBP10.02□□□□□ -0.81
CCDC40-212ENST00000574799 SPATA31D3P0C874 917 aa10.02□□□□□ -0.81
CCDC40-212ENST00000574799 ITGB5P18084 799 aa10.02□□□□□ -0.81
CCDC40-212ENST00000574799 ARL4CP56559 192 aa10.02□□□□□ -0.81
CCDC40-212ENST00000574799 DLGAP5Q15398 846 aa10.02□□□□□ -0.81
CCDC40-212ENST00000574799 KBTBD12Q3ZCT8 623 aa10.02□□□□□ -0.81
CCDC40-212ENST00000574799 CBWD6Q4V339 395 aa10.02□□□□□ -0.81
CCDC40-212ENST00000574799 CBWD3Q5JTY5 395 aa10.02□□□□□ -0.81
CCDC40-212ENST00000574799 CBWD5Q5RIA9 395 aa10.02□□□□□ -0.81
CCDC40-212ENST00000574799 SPATA31D4Q6ZUB0 917 aa10.02□□□□□ -0.81
CCDC40-212ENST00000574799 ALYREFQ86V81 257 aaKnown RBP10.02□□□□□ -0.81
CCDC40-212ENST00000574799 ZDHHC14Q8IZN3 488 aa10.02□□□□□ -0.81
CCDC40-212ENST00000574799 LRGUKQ96M69 825 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms