RNA–Protein interactions for RNA: ENST00000574776.5

CTNS-209, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 4

Gene CTNS, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-209ENST00000574776 ARHGAP8P85298 464 aa16.33■□□□□ 0.2
CTNS-209ENST00000574776 LMNB2Q03252 620 aa16.33■□□□□ 0.2
CTNS-209ENST00000574776 SOWAHAQ2M3V2 549 aa16.33■□□□□ 0.2
CTNS-209ENST00000574776 LONP2Q86WA8 852 aa16.33■□□□□ 0.2
CTNS-209ENST00000574776 ADGRF2Q8IZF7 708 aa16.33■□□□□ 0.2
CTNS-209ENST00000574776 TOP6BLQ8N6T0 577 aa16.33■□□□□ 0.2
CTNS-209ENST00000574776 LINC00301Q8NCQ3 95 aa16.33■□□□□ 0.2
CTNS-209ENST00000574776 OR5B17Q8NGF7 314 aa16.33■□□□□ 0.2
CTNS-209ENST00000574776 ANKRD36BP1Q96IX9 119 aa16.33■□□□□ 0.2
CTNS-209ENST00000574776 CYP2S1Q96SQ9 504 aa16.33■□□□□ 0.2
CTNS-209ENST00000574776 ABCB6Q9NP58 842 aa16.33■□□□□ 0.2
CTNS-209ENST00000574776 R3HCC1Q9Y3T6 440 aaKnown RBP16.33■□□□□ 0.2
CTNS-209ENST00000574776 SPTBN2O15020 2390 aa16.33■□□□□ 0.2
CTNS-209ENST00000574776 SOBPA7XYQ1 873 aa16.32■□□□□ 0.2
CTNS-209ENST00000574776 GABRDO14764 452 aa16.32■□□□□ 0.2
CTNS-209ENST00000574776 SPTLC2O15270 562 aa16.32■□□□□ 0.2
CTNS-209ENST00000574776 ATP2C2O75185 946 aa16.32■□□□□ 0.2
CTNS-209ENST00000574776 NOL4O94818 638 aa16.32■□□□□ 0.2
CTNS-209ENST00000574776 RETP07949 1114 aa16.32■□□□□ 0.2
CTNS-209ENST00000574776 ARSAP15289 507 aa16.32■□□□□ 0.2
CTNS-209ENST00000574776 LMO2P25791 158 aa16.32■□□□□ 0.2
CTNS-209ENST00000574776 CNR2P34972 360 aa16.32■□□□□ 0.2
CTNS-209ENST00000574776 HOXD13P35453 343 aa16.32■□□□□ 0.2
CTNS-209ENST00000574776 PTPRJQ12913 1337 aa16.32■□□□□ 0.2
CTNS-209ENST00000574776 MYO1EQ12965 1108 aa16.32■□□□□ 0.2
CTNS-209ENST00000574776 DUOXA2Q1HG44 320 aa16.32■□□□□ 0.2
CTNS-209ENST00000574776 CC2D1AQ6P1N0 951 aaPredicted RBP16.32■□□□□ 0.2
CTNS-209ENST00000574776 PKN3Q6P5Z2 889 aa16.32■□□□□ 0.2
CTNS-209ENST00000574776 SDK1Q7Z5N4 2213 aa16.32■□□□□ 0.2
CTNS-209ENST00000574776 CBWD2Q8IUF1 395 aa16.32■□□□□ 0.2
CTNS-209ENST00000574776 SPATA2LQ8IUW3 424 aaPredicted RBP16.32■□□□□ 0.2
CTNS-209ENST00000574776 SCN4BQ8IWT1 228 aa16.32■□□□□ 0.2
CTNS-209ENST00000574776 RIN3Q8TB24 985 aa16.32■□□□□ 0.2
CTNS-209ENST00000574776 HPDLQ96IR7 371 aa16.32■□□□□ 0.2
CTNS-209ENST00000574776 TRPC7Q9HCX4 862 aa16.32■□□□□ 0.2
CTNS-209ENST00000574776 KBTBD4Q9NVX7 518 aa16.32■□□□□ 0.2
CTNS-209ENST00000574776 KIAA0391O15091 583 aaKnown RBP16.31■□□□□ 0.2
CTNS-209ENST00000574776 TADA3O75528 432 aa16.31■□□□□ 0.2
CTNS-209ENST00000574776 TNNC2P02585 160 aa16.31■□□□□ 0.2
CTNS-209ENST00000574776 PDGFRBP09619 1106 aa16.31■□□□□ 0.2
CTNS-209ENST00000574776 PCSK1P29120 753 aa16.31■□□□□ 0.2
CTNS-209ENST00000574776 GRSF1Q12849 480 aaKnown RBP eCLIP16.31■□□□□ 0.2
CTNS-209ENST00000574776 E2F4Q16254 413 aa16.31■□□□□ 0.2
CTNS-209ENST00000574776 TMEM196Q5HYL7 178 aa16.31■□□□□ 0.2
CTNS-209ENST00000574776 FSTL4Q6MZW2 842 aa16.31■□□□□ 0.2
CTNS-209ENST00000574776 FAM171BQ6P995 826 aa16.31■□□□□ 0.2
CTNS-209ENST00000574776 STXBP4Q6ZWJ1 553 aa16.31■□□□□ 0.2
CTNS-209ENST00000574776 DPH6Q7L8W6 267 aa16.31■□□□□ 0.2
CTNS-209ENST00000574776 RDH13Q8NBN7 331 aa16.31■□□□□ 0.2
CTNS-209ENST00000574776 TTC16Q8NEE8 873 aa16.31■□□□□ 0.2
CTNS-209ENST00000574776 SPATA18Q8TC71 538 aa16.31■□□□□ 0.2
CTNS-209ENST00000574776 DHX58Q96C10 678 aa16.31■□□□□ 0.2
CTNS-209ENST00000574776 CHFRQ96EP1 664 aa16.31■□□□□ 0.2
CTNS-209ENST00000574776 TRMT2BQ96GJ1 504 aaKnown RBP16.31■□□□□ 0.2
CTNS-209ENST00000574776 MYRFLQ96LU7 910 aa16.31■□□□□ 0.2
CTNS-209ENST00000574776 TRIM9Q9C026 710 aa16.31■□□□□ 0.2
CTNS-209ENST00000574776 LRRC27Q9C0I9 530 aa16.31■□□□□ 0.2
CTNS-209ENST00000574776 TNMDQ9H2S6 317 aa16.31■□□□□ 0.2
CTNS-209ENST00000574776 KIF9Q9HAQ2 790 aa16.31■□□□□ 0.2
CTNS-209ENST00000574776 FBRSL1Q9HCM7 1045 aaKnown RBP16.31■□□□□ 0.2
CTNS-209ENST00000574776 HSPBP1Q9NZL4 362 aa16.31■□□□□ 0.2
CTNS-209ENST00000574776 UXTQ9UBK9 157 aaPredicted RBP16.31■□□□□ 0.2
CTNS-209ENST00000574776 CDV3Q9UKY7 258 aaKnown RBP16.31■□□□□ 0.2
CTNS-209ENST00000574776 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.31■□□□□ 0.2
CTNS-209ENST00000574776 DCDC2BA2VCK2 349 aa16.3■□□□□ 0.2
CTNS-209ENST00000574776 K7ELQ4 463 aaPredicted RBP16.3■□□□□ 0.2
CTNS-209ENST00000574776 TRDMT1O14717 391 aaKnown RBP16.3■□□□□ 0.2
CTNS-209ENST00000574776 HOXA6P31267 233 aa16.3■□□□□ 0.2
CTNS-209ENST00000574776 PXNP49023 591 aaPredicted RBP16.3■□□□□ 0.2
CTNS-209ENST00000574776 GALK1P51570 392 aa16.3■□□□□ 0.2
CTNS-209ENST00000574776 AMPD3Q01432 767 aa16.3■□□□□ 0.2
CTNS-209ENST00000574776 ZNF268Q14587 947 aaPredicted RBP16.3■□□□□ 0.2
CTNS-209ENST00000574776 SURF1Q15526 300 aa16.3■□□□□ 0.2
CTNS-209ENST00000574776 CFAP221Q4G0U5 840 aa16.3■□□□□ 0.2
CTNS-209ENST00000574776 FOXD4L5Q5VV16 416 aaPredicted RBP16.3■□□□□ 0.2
CTNS-209ENST00000574776 CEP68Q76N32 757 aa16.3■□□□□ 0.2
CTNS-209ENST00000574776 LIMS2Q7Z4I7 341 aa16.3■□□□□ 0.2
CTNS-209ENST00000574776 ZNF507Q8TCN5 953 aa16.3■□□□□ 0.2
CTNS-209ENST00000574776 KBTBD7Q8WVZ9 684 aa16.3■□□□□ 0.2
CTNS-209ENST00000574776 FOXD4L4Q8WXT5 416 aaPredicted RBP16.3■□□□□ 0.2
CTNS-209ENST00000574776 ZNF396Q96N95 335 aaPredicted RBP16.3■□□□□ 0.2
CTNS-209ENST00000574776 SLC22A12Q96S37 553 aa16.3■□□□□ 0.2
CTNS-209ENST00000574776 SYT15Q9BQS2 421 aa16.3■□□□□ 0.2
CTNS-209ENST00000574776 MAGEC2Q9UBF1 373 aaPredicted RBP16.3■□□□□ 0.2
CTNS-209ENST00000574776 OBSL1O75147 1896 aa16.3■□□□□ 0.2
CTNS-209ENST00000574776 RALGAPA1Q6GYQ0 2036 aa16.29■□□□□ 0.2
CTNS-209ENST00000574776 PPP6R2O75170 966 aa16.29■□□□□ 0.2
CTNS-209ENST00000574776 CST3P01034 146 aaPredicted RBP16.29■□□□□ 0.2
CTNS-209ENST00000574776 EGFP01133 1207 aa16.29■□□□□ 0.2
CTNS-209ENST00000574776 USP17L7P0C7H9 530 aa16.29■□□□□ 0.2
CTNS-209ENST00000574776 PSMC1P62191 440 aaKnown RBP16.29■□□□□ 0.2
CTNS-209ENST00000574776 ASIC1P78348 528 aa16.29■□□□□ 0.2
CTNS-209ENST00000574776 AMPD2Q01433 879 aa16.29■□□□□ 0.2
CTNS-209ENST00000574776 PDGFRLQ15198 375 aa16.29■□□□□ 0.2
CTNS-209ENST00000574776 TRAPPC11Q7Z392 1133 aa16.29■□□□□ 0.2
CTNS-209ENST00000574776 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.29■□□□□ 0.2
CTNS-209ENST00000574776 WDR5BQ86VZ2 330 aa16.29■□□□□ 0.2
CTNS-209ENST00000574776 ARL14EPQ8N8R7 260 aaPredicted RBP16.29■□□□□ 0.2
CTNS-209ENST00000574776 FUBP3Q96I24 572 aaKnown RBP eCLIP16.29■□□□□ 0.2
CTNS-209ENST00000574776 MMS19Q96T76 1030 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms