RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 KCND1Q9NSA2 647 aa25.47■■□□□ 1.67
ATPAF1-213ENST00000574428 TMLHEQ9NVH6 421 aa25.47■■□□□ 1.67
ATPAF1-213ENST00000574428 CYTH4Q9UIA0 394 aa25.47■■□□□ 1.67
ATPAF1-213ENST00000574428 LINC01553A4QN01 128 aa25.46■■□□□ 1.67
ATPAF1-213ENST00000574428 FGF18O76093 207 aa25.46■■□□□ 1.67
ATPAF1-213ENST00000574428 SOD2P04179 222 aa25.46■■□□□ 1.67
ATPAF1-213ENST00000574428 H2AFZP0C0S5 128 aa25.46■■□□□ 1.67
ATPAF1-213ENST00000574428 CDH5P33151 784 aaPredicted RBP25.46■■□□□ 1.67
ATPAF1-213ENST00000574428 FAM171BQ6P995 826 aa25.46■■□□□ 1.67
ATPAF1-213ENST00000574428 H2AFVQ71UI9 128 aa25.46■■□□□ 1.67
ATPAF1-213ENST00000574428 RIN2Q8WYP3 895 aaPredicted RBP25.46■■□□□ 1.67
ATPAF1-213ENST00000574428 SECISBP2LQ93073 1101 aaKnown RBP25.46■■□□□ 1.67
ATPAF1-213ENST00000574428 MYLPFQ96A32 169 aa25.46■■□□□ 1.67
ATPAF1-213ENST00000574428 HNRNPABQ99729 332 aaKnown RBP25.46■■□□□ 1.67
ATPAF1-213ENST00000574428 HESX1Q9UBX0 185 aa25.46■■□□□ 1.67
ATPAF1-213ENST00000574428 CCP110O43303 1012 aa25.46■■□□□ 1.67
ATPAF1-213ENST00000574428 ARHGEF15O94989 841 aa25.46■■□□□ 1.67
ATPAF1-213ENST00000574428 ARHGAP25P42331 645 aa25.46■■□□□ 1.67
ATPAF1-213ENST00000574428 C2CD6Q53TS8 623 aa25.46■■□□□ 1.67
ATPAF1-213ENST00000574428 KIAA1841Q6NSI8 718 aa25.46■■□□□ 1.67
ATPAF1-213ENST00000574428 PAQR9Q6ZVX9 377 aa25.46■■□□□ 1.67
ATPAF1-213ENST00000574428 DDX53Q86TM3 631 aaKnown RBP25.46■■□□□ 1.67
ATPAF1-213ENST00000574428 ZCWPW1Q9H0M4 648 aa25.46■■□□□ 1.67
ATPAF1-213ENST00000574428 CHST7Q9NS84 486 aa25.46■■□□□ 1.67
ATPAF1-213ENST00000574428 C2CD2LO14523 706 aa25.45■■□□□ 1.66
ATPAF1-213ENST00000574428 CTNNB1P35222 781 aa25.45■■□□□ 1.66
ATPAF1-213ENST00000574428 GPD2P43304 727 aa25.45■■□□□ 1.66
ATPAF1-213ENST00000574428 PKDCCQ504Y2 493 aa25.45■■□□□ 1.66
ATPAF1-213ENST00000574428 RSPO2Q6UXX9 243 aaPredicted RBP25.45■■□□□ 1.66
ATPAF1-213ENST00000574428 ANKS3Q6ZW76 656 aa25.45■■□□□ 1.66
ATPAF1-213ENST00000574428 SPRED2Q7Z698 418 aa25.45■■□□□ 1.66
ATPAF1-213ENST00000574428 KLHL23Q8NBE8 558 aa25.45■■□□□ 1.66
ATPAF1-213ENST00000574428 HERC2P3Q9BVR0 1158 aa25.45■■□□□ 1.66
ATPAF1-213ENST00000574428 ZNF518BQ9C0D4 1074 aa25.45■■□□□ 1.66
ATPAF1-213ENST00000574428 THAP2Q9H0W7 228 aa25.45■■□□□ 1.66
ATPAF1-213ENST00000574428 DUSP10Q9Y6W6 482 aa25.45■■□□□ 1.66
ATPAF1-213ENST00000574428 GBF1Q92538 1859 aa25.44■■□□□ 1.66
ATPAF1-213ENST00000574428 H7C4K7 107 aa25.44■■□□□ 1.66
ATPAF1-213ENST00000574428 KIF5AQ12840 1032 aa25.44■■□□□ 1.66
ATPAF1-213ENST00000574428 SLC39A12Q504Y0 691 aa25.44■■□□□ 1.66
ATPAF1-213ENST00000574428 MMS22LQ6ZRQ5 1243 aa25.44■■□□□ 1.66
ATPAF1-213ENST00000574428 FAM35AQ86V20 835 aa25.44■■□□□ 1.66
ATPAF1-213ENST00000574428 ANKRD52Q8NB46 1076 aa25.44■■□□□ 1.66
ATPAF1-213ENST00000574428 C11orf70Q9BRQ4 267 aa25.44■■□□□ 1.66
ATPAF1-213ENST00000574428 RHOBTB2Q9BYZ6 727 aa25.44■■□□□ 1.66
ATPAF1-213ENST00000574428 TNRC18O15417 2968 aaPredicted RBP25.44■■□□□ 1.66
ATPAF1-213ENST00000574428 ANKRD62A6NC57 917 aa25.44■■□□□ 1.66
ATPAF1-213ENST00000574428 OR6C75A6NL08 312 aa25.44■■□□□ 1.66
ATPAF1-213ENST00000574428 TULP2O00295 520 aa25.44■■□□□ 1.66
ATPAF1-213ENST00000574428 CA3P07451 260 aa25.44■■□□□ 1.66
ATPAF1-213ENST00000574428 BCAT1P54687 386 aa25.44■■□□□ 1.66
ATPAF1-213ENST00000574428 ARPP19P56211 112 aa25.44■■□□□ 1.66
ATPAF1-213ENST00000574428 PLCB3Q01970 1234 aa25.44■■□□□ 1.66
ATPAF1-213ENST00000574428 KRT17Q04695 432 aa25.44■■□□□ 1.66
ATPAF1-213ENST00000574428 PDE4CQ08493 712 aa25.44■■□□□ 1.66
ATPAF1-213ENST00000574428 ARHGAP29Q52LW3 1261 aa25.44■■□□□ 1.66
ATPAF1-213ENST00000574428 MON1BQ7L1V2 547 aa25.44■■□□□ 1.66
ATPAF1-213ENST00000574428 PHF13Q86YI8 300 aaPredicted RBP25.44■■□□□ 1.66
ATPAF1-213ENST00000574428 VPS52Q8N1B4 723 aa25.44■■□□□ 1.66
ATPAF1-213ENST00000574428 PIK3R5Q8WYR1 880 aa25.44■■□□□ 1.66
ATPAF1-213ENST00000574428 C17orf80Q9BSJ5 609 aa25.44■■□□□ 1.66
ATPAF1-213ENST00000574428 KRT82Q9NSB4 513 aa25.44■■□□□ 1.66
ATPAF1-213ENST00000574428 PJA2O43164 708 aa25.43■■□□□ 1.66
ATPAF1-213ENST00000574428 ATMINO43313 823 aaPredicted RBP25.43■■□□□ 1.66
ATPAF1-213ENST00000574428 TBC1D4O60343 1298 aa25.43■■□□□ 1.66
ATPAF1-213ENST00000574428 BMPR1AP36894 532 aa25.43■■□□□ 1.66
ATPAF1-213ENST00000574428 GLUD2P49448 558 aa25.43■■□□□ 1.66
ATPAF1-213ENST00000574428 PDCLQ13371 301 aa25.43■■□□□ 1.66
ATPAF1-213ENST00000574428 MAPRE1Q15691 268 aaKnown RBP25.43■■□□□ 1.66
ATPAF1-213ENST00000574428 PSMD5Q16401 504 aa25.43■■□□□ 1.66
ATPAF1-213ENST00000574428 DNTTIP2Q5QJE6 756 aaKnown RBP25.43■■□□□ 1.66
ATPAF1-213ENST00000574428 MCOLN2Q8IZK6 566 aa25.43■■□□□ 1.66
ATPAF1-213ENST00000574428 CTNNBL1Q8WYA6 563 aaPredicted RBP25.43■■□□□ 1.66
ATPAF1-213ENST00000574428 ARHGEF26Q96DR7 871 aa25.43■■□□□ 1.66
ATPAF1-213ENST00000574428 ADAM22Q9P0K1 906 aa25.43■■□□□ 1.66
ATPAF1-213ENST00000574428 MTUS1Q9ULD2 1270 aa25.43■■□□□ 1.66
ATPAF1-213ENST00000574428 INTUQ9ULD6 942 aa25.43■■□□□ 1.66
ATPAF1-213ENST00000574428 NLRC5Q86WI3 1866 aa25.42■■□□□ 1.66
ATPAF1-213ENST00000574428 ATP8B3O60423 1300 aa25.42■■□□□ 1.66
ATPAF1-213ENST00000574428 TMEM253P0C7T8 217 aa25.42■■□□□ 1.66
ATPAF1-213ENST00000574428 RPL17P18621 184 aaKnown RBP25.42■■□□□ 1.66
ATPAF1-213ENST00000574428 MMP8P22894 467 aa25.42■■□□□ 1.66
ATPAF1-213ENST00000574428 DSG1Q02413 1049 aa25.42■■□□□ 1.66
ATPAF1-213ENST00000574428 BST2Q10589 180 aaKnown RBP25.42■■□□□ 1.66
ATPAF1-213ENST00000574428 PTPN20Q4JDL3 420 aa25.42■■□□□ 1.66
ATPAF1-213ENST00000574428 PHLDB2Q86SQ0 1253 aa25.42■■□□□ 1.66
ATPAF1-213ENST00000574428 DCP1BQ8IZD4 617 aaKnown RBP25.42■■□□□ 1.66
ATPAF1-213ENST00000574428 TXLNBQ8N3L3 684 aa25.42■■□□□ 1.66
ATPAF1-213ENST00000574428 ZNF653Q96CK0 615 aa25.42■■□□□ 1.66
ATPAF1-213ENST00000574428 CPXM1Q96SM3 734 aa25.42■■□□□ 1.66
ATPAF1-213ENST00000574428 MTRRQ9UBK8 725 aa25.42■■□□□ 1.66
ATPAF1-213ENST00000574428 TJP2Q9UDY2 1190 aa25.42■■□□□ 1.66
ATPAF1-213ENST00000574428 CHORDC1Q9UHD1 332 aaPredicted RBP25.42■■□□□ 1.66
ATPAF1-213ENST00000574428 GUCA1BQ9UMX6 200 aa25.42■■□□□ 1.66
ATPAF1-213ENST00000574428 RANBP2P49792 3224 aaKnown RBP25.42■■□□□ 1.66
ATPAF1-213ENST00000574428 FAM200BP0CF97 657 aa25.41■■□□□ 1.66
ATPAF1-213ENST00000574428 DNAJB2P25686 324 aa25.41■■□□□ 1.66
ATPAF1-213ENST00000574428 PBX2P40425 430 aa25.41■■□□□ 1.66
ATPAF1-213ENST00000574428 RGS7P49802 495 aa25.41■■□□□ 1.66
ATPAF1-213ENST00000574428 CACNA2D1P54289 1103 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms