RNA–Protein interactions for RNA: ENST00000573903.1

CCDC40-210, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-210ENST00000573903 ZNF268Q14587 947 aaPredicted RBP13.08□□□□□ -0.32
CCDC40-210ENST00000573903 SURF1Q15526 300 aa13.08□□□□□ -0.32
CCDC40-210ENST00000573903 DDR2Q16832 855 aa13.08□□□□□ -0.32
CCDC40-210ENST00000573903 TMEM196Q5HYL7 178 aa13.08□□□□□ -0.32
CCDC40-210ENST00000573903 WDR44Q5JSH3 913 aa13.08□□□□□ -0.32
CCDC40-210ENST00000573903 TRIM68Q6AZZ1 485 aa13.08□□□□□ -0.32
CCDC40-210ENST00000573903 C4orf50Q6ZRC1 276 aa13.08□□□□□ -0.32
CCDC40-210ENST00000573903 TMEM150AQ86TG1 271 aa13.08□□□□□ -0.32
CCDC40-210ENST00000573903 MON1AQ86VX9 555 aa13.08□□□□□ -0.32
CCDC40-210ENST00000573903 SCN4BQ8IWT1 228 aa13.08□□□□□ -0.32
CCDC40-210ENST00000573903 GPD1LQ8N335 351 aa13.08□□□□□ -0.32
CCDC40-210ENST00000573903 FAM160A2Q8N612 972 aaPredicted RBP13.08□□□□□ -0.32
CCDC40-210ENST00000573903 TOP6BLQ8N6T0 577 aa13.08□□□□□ -0.32
CCDC40-210ENST00000573903 C12orf50Q8NA57 414 aaPredicted RBP13.08□□□□□ -0.32
CCDC40-210ENST00000573903 TTC16Q8NEE8 873 aa13.08□□□□□ -0.32
CCDC40-210ENST00000573903 TRMT2BQ96GJ1 504 aaKnown RBP13.08□□□□□ -0.32
CCDC40-210ENST00000573903 FAM83CQ9BQN1 747 aa13.08□□□□□ -0.32
CCDC40-210ENST00000573903 MTMR12Q9C0I1 747 aa13.08□□□□□ -0.32
CCDC40-210ENST00000573903 LRRC27Q9C0I9 530 aa13.08□□□□□ -0.32
CCDC40-210ENST00000573903 HPS4Q9NQG7 708 aa13.08□□□□□ -0.32
CCDC40-210ENST00000573903 TMLHEQ9NVH6 421 aa13.08□□□□□ -0.32
CCDC40-210ENST00000573903 GDAP2Q9NXN4 497 aa13.08□□□□□ -0.32
CCDC40-210ENST00000573903 CCL26Q9Y258 94 aa13.08□□□□□ -0.32
CCDC40-210ENST00000573903 TRAV19A0A0A6YYK7 116 aa13.07□□□□□ -0.32
CCDC40-210ENST00000573903 CCDC163A0A0D9SF12 145 aa13.07□□□□□ -0.32
CCDC40-210ENST00000573903 TRDMT1O14717 391 aaKnown RBP13.07□□□□□ -0.32
CCDC40-210ENST00000573903 SLC30A4O14863 429 aa13.07□□□□□ -0.32
CCDC40-210ENST00000573903 RPP40O75818 363 aaKnown RBP13.07□□□□□ -0.32
CCDC40-210ENST00000573903 NOL4O94818 638 aa13.07□□□□□ -0.32
CCDC40-210ENST00000573903 TNNC2P02585 160 aa13.07□□□□□ -0.32
CCDC40-210ENST00000573903 USP17L7P0C7H9 530 aa13.07□□□□□ -0.32
CCDC40-210ENST00000573903 DRD1P21728 446 aa13.07□□□□□ -0.32
CCDC40-210ENST00000573903 CYP2F1P24903 491 aa13.07□□□□□ -0.32
CCDC40-210ENST00000573903 IFNAR2P48551 515 aa13.07□□□□□ -0.32
CCDC40-210ENST00000573903 CASP5P51878 434 aa13.07□□□□□ -0.32
CCDC40-210ENST00000573903 FAM160A1Q05DH4 1040 aa13.07□□□□□ -0.32
CCDC40-210ENST00000573903 MTF1Q14872 753 aa13.07□□□□□ -0.32
CCDC40-210ENST00000573903 FBXO43Q4G163 708 aa13.07□□□□□ -0.32
CCDC40-210ENST00000573903 AASDHQ4L235 1098 aaPredicted RBP13.07□□□□□ -0.32
CCDC40-210ENST00000573903 SDHAF4Q5VUM1 108 aa13.07□□□□□ -0.32
CCDC40-210ENST00000573903 SPRYD3Q8NCJ5 442 aa13.07□□□□□ -0.32
CCDC40-210ENST00000573903 STKLD1Q8NE28 680 aa13.07□□□□□ -0.32
CCDC40-210ENST00000573903 GAB3Q8WWW8 586 aa13.07□□□□□ -0.32
CCDC40-210ENST00000573903 DDX1Q92499 740 aaKnown RBP13.07□□□□□ -0.32
CCDC40-210ENST00000573903 FUBP3Q96I24 572 aaKnown RBP eCLIP13.07□□□□□ -0.32
CCDC40-210ENST00000573903 CBWD1Q9BRT8 395 aa13.07□□□□□ -0.32
CCDC40-210ENST00000573903 PCIF1Q9H4Z3 704 aa13.07□□□□□ -0.32
CCDC40-210ENST00000573903 PDE11AQ9HCR9 933 aa13.07□□□□□ -0.32
CCDC40-210ENST00000573903 GTF3C4Q9UKN8 822 aa13.07□□□□□ -0.32
CCDC40-210ENST00000573903 DNAH14Q0VDD8 3507 aa13.06□□□□□ -0.32
CCDC40-210ENST00000573903 GREB1Q4ZG55 1949 aa13.06□□□□□ -0.32
CCDC40-210ENST00000573903 FRMD3A2A2Y4 597 aa13.06□□□□□ -0.32
CCDC40-210ENST00000573903 RNF40O75150 1001 aa13.06□□□□□ -0.32
CCDC40-210ENST00000573903 PRPF6O94906 941 aaKnown RBP13.06□□□□□ -0.32
CCDC40-210ENST00000573903 ZSCAN22P10073 491 aaPredicted RBP13.06□□□□□ -0.32
CCDC40-210ENST00000573903 ARSAP15289 507 aa13.06□□□□□ -0.32
CCDC40-210ENST00000573903 PDE6CP51160 858 aa13.06□□□□□ -0.32
CCDC40-210ENST00000573903 WNT7BP56706 349 aa13.06□□□□□ -0.32
CCDC40-210ENST00000573903 NR1H3Q13133 447 aa13.06□□□□□ -0.32
CCDC40-210ENST00000573903 KCNB1Q14721 858 aa13.06□□□□□ -0.32
CCDC40-210ENST00000573903 MAPRE1Q15691 268 aaKnown RBP13.06□□□□□ -0.32
CCDC40-210ENST00000573903 CFAP221Q4G0U5 840 aa13.06□□□□□ -0.32
CCDC40-210ENST00000573903 IL31Q6EBC2 164 aa13.06□□□□□ -0.32
CCDC40-210ENST00000573903 FSTL4Q6MZW2 842 aa13.06□□□□□ -0.32
CCDC40-210ENST00000573903 FAM173BQ6P4H8 233 aa13.06□□□□□ -0.32
CCDC40-210ENST00000573903 DPH6Q7L8W6 267 aa13.06□□□□□ -0.32
CCDC40-210ENST00000573903 CACNA2D4Q7Z3S7 1137 aa13.06□□□□□ -0.32
CCDC40-210ENST00000573903 PDILTQ8N807 584 aa13.06□□□□□ -0.32
CCDC40-210ENST00000573903 ZSWIM2Q8NEG5 633 aa13.06□□□□□ -0.32
CCDC40-210ENST00000573903 ATP2A3Q93084 1043 aa13.06□□□□□ -0.32
CCDC40-210ENST00000573903 LOXL4Q96JB6 756 aa13.06□□□□□ -0.32
CCDC40-210ENST00000573903 MYRFLQ96LU7 910 aa13.06□□□□□ -0.32
CCDC40-210ENST00000573903 ZNF396Q96N95 335 aaPredicted RBP13.06□□□□□ -0.32
CCDC40-210ENST00000573903 P2RY13Q9BPV8 354 aa13.06□□□□□ -0.32
CCDC40-210ENST00000573903 PANK2Q9BZ23 570 aa13.06□□□□□ -0.32
CCDC40-210ENST00000573903 C2orf42Q9NWW7 574 aa13.06□□□□□ -0.32
CCDC40-210ENST00000573903 DUS2Q9NX74 493 aaKnown RBP13.06□□□□□ -0.32
CCDC40-210ENST00000573903 ZNF233A6NK53 670 aa13.05□□□□□ -0.32
CCDC40-210ENST00000573903 TADA3O75528 432 aa13.05□□□□□ -0.32
CCDC40-210ENST00000573903 AKAP3O75969 853 aa13.05□□□□□ -0.32
CCDC40-210ENST00000573903 F13A1P00488 732 aa13.05□□□□□ -0.32
CCDC40-210ENST00000573903 EGFP01133 1207 aa13.05□□□□□ -0.32
CCDC40-210ENST00000573903 KCNA4P22459 653 aa13.05□□□□□ -0.32
CCDC40-210ENST00000573903 ANXA13P27216 316 aa13.05□□□□□ -0.32
CCDC40-210ENST00000573903 PXNP49023 591 aaPredicted RBP13.05□□□□□ -0.32
CCDC40-210ENST00000573903 PSMD2Q13200 908 aa13.05□□□□□ -0.32
CCDC40-210ENST00000573903 SLC39A14Q15043 492 aa13.05□□□□□ -0.32
CCDC40-210ENST00000573903 STK38Q15208 465 aa13.05□□□□□ -0.32
CCDC40-210ENST00000573903 PPM1JQ5JR12 505 aa13.05□□□□□ -0.32
CCDC40-210ENST00000573903 CAMKK1Q8N5S9 505 aa13.05□□□□□ -0.32
CCDC40-210ENST00000573903 CCDC26Q8TAB7 109 aa13.05□□□□□ -0.32
CCDC40-210ENST00000573903 OSCP1Q8WVF1 389 aa13.05□□□□□ -0.32
CCDC40-210ENST00000573903 CD101Q93033 1021 aa13.05□□□□□ -0.32
CCDC40-210ENST00000573903 ACDQ96AP0 544 aa13.05□□□□□ -0.32
CCDC40-210ENST00000573903 HPDLQ96IR7 371 aa13.05□□□□□ -0.32
CCDC40-210ENST00000573903 USP28Q96RU2 1077 aa13.05□□□□□ -0.32
CCDC40-210ENST00000573903 SYT15Q9BQS2 421 aa13.05□□□□□ -0.32
CCDC40-210ENST00000573903 TNMDQ9H2S6 317 aa13.05□□□□□ -0.32
CCDC40-210ENST00000573903 ECT2Q9H8V3 914 aa13.05□□□□□ -0.32
CCDC40-210ENST00000573903 KIAA1586Q9HCI6 787 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms