RNA–Protein interactions for RNA: ENST00000573667.1

ABR-222, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 4

Gene ABR, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-222	ENST00000573667	TMC2	Q8TDI7	906 aa		12.77	□□□□□ -0.37
ABR-222	ENST00000573667	PKMYT1	Q99640	499 aa		12.77	□□□□□ -0.37
ABR-222	ENST00000573667	TASP1	Q9H6P5	420 aa		12.77	□□□□□ -0.37
ABR-222	ENST00000573667		A8MXQ7	604 aa		12.76	□□□□□ -0.37
ABR-222	ENST00000573667	IKBKB	O14920	756 aa		12.76	□□□□□ -0.37
ABR-222	ENST00000573667	MAPK13	O15264	365 aa		12.76	□□□□□ -0.37
ABR-222	ENST00000573667	NCAM2	O15394	837 aa		12.76	□□□□□ -0.37
ABR-222	ENST00000573667	ATP2C2	O75185	946 aa		12.76	□□□□□ -0.37
ABR-222	ENST00000573667	SMC2	O95347	1197 aa		12.76	□□□□□ -0.37
ABR-222	ENST00000573667	P4HA1	P13674	534 aa		12.76	□□□□□ -0.37
ABR-222	ENST00000573667	LMO2	P25791	158 aa		12.76	□□□□□ -0.37
ABR-222	ENST00000573667	DDX6	P26196	483 aa	Known RBP eCLIP	12.76	□□□□□ -0.37
ABR-222	ENST00000573667	AVPR1A	P37288	418 aa		12.76	□□□□□ -0.37
ABR-222	ENST00000573667	GRIK1	P39086	918 aa		12.76	□□□□□ -0.37
ABR-222	ENST00000573667	GPR15	P49685	360 aa		12.76	□□□□□ -0.37
ABR-222	ENST00000573667	VAMP7	P51809	220 aa		12.76	□□□□□ -0.37
ABR-222	ENST00000573667	DLG4	P78352	724 aa		12.76	□□□□□ -0.37
ABR-222	ENST00000573667	CLDN10	P78369	228 aa		12.76	□□□□□ -0.37
ABR-222	ENST00000573667	ADAM9	Q13443	819 aa		12.76	□□□□□ -0.37
ABR-222	ENST00000573667	NCOA4	Q13772	614 aa		12.76	□□□□□ -0.37
ABR-222	ENST00000573667	NFIL3	Q16649	462 aa		12.76	□□□□□ -0.37
ABR-222	ENST00000573667	VSTM1	Q6UX27	236 aa		12.76	□□□□□ -0.37
ABR-222	ENST00000573667	INTS8	Q75QN2	995 aa	Known RBP	12.76	□□□□□ -0.37
ABR-222	ENST00000573667	LIMS2	Q7Z4I7	341 aa		12.76	□□□□□ -0.37
ABR-222	ENST00000573667	DTWD2	Q8NBA8	298 aa		12.76	□□□□□ -0.37
ABR-222	ENST00000573667	PLEKHO2	Q8TD55	490 aa		12.76	□□□□□ -0.37
ABR-222	ENST00000573667	CSGALNACT1	Q8TDX6	532 aa		12.76	□□□□□ -0.37
ABR-222	ENST00000573667	MRPS31	Q92665	395 aa	Known RBP	12.76	□□□□□ -0.37
ABR-222	ENST00000573667	SMARCE1	Q969G3	411 aa		12.76	□□□□□ -0.37
ABR-222	ENST00000573667	MYLPF	Q96A32	169 aa		12.76	□□□□□ -0.37
ABR-222	ENST00000573667	GSDMA	Q96QA5	445 aa		12.76	□□□□□ -0.37
ABR-222	ENST00000573667	NELL2	Q99435	816 aa		12.76	□□□□□ -0.37
ABR-222	ENST00000573667	MRPL45	Q9BRJ2	306 aa	Known RBP	12.76	□□□□□ -0.37
ABR-222	ENST00000573667	FOXQ1	Q9C009	403 aa		12.76	□□□□□ -0.37
ABR-222	ENST00000573667	GZF1	Q9H116	711 aa	Predicted RBP	12.76	□□□□□ -0.37
ABR-222	ENST00000573667	HEBP1	Q9NRV9	189 aa		12.76	□□□□□ -0.37
ABR-222	ENST00000573667	MRPS17	Q9Y2R5	130 aa	Known RBP	12.76	□□□□□ -0.37
ABR-222	ENST00000573667	SLC38A8	A6NNN8	435 aa		12.75	□□□□□ -0.37
ABR-222	ENST00000573667	TRIM66	O15016	1216 aa		12.75	□□□□□ -0.37
ABR-222	ENST00000573667	C4BPA	P04003	597 aa	Known RBP	12.75	□□□□□ -0.37
ABR-222	ENST00000573667	DCN	P07585	359 aa	Known RBP	12.75	□□□□□ -0.37
ABR-222	ENST00000573667	TRIM21	P19474	475 aa	Known RBP	12.75	□□□□□ -0.37
ABR-222	ENST00000573667	PSMC2	P35998	433 aa	Known RBP	12.75	□□□□□ -0.37
ABR-222	ENST00000573667	PIK3CA	P42336	1068 aa		12.75	□□□□□ -0.37
ABR-222	ENST00000573667	MAGEA11	P43364	429 aa		12.75	□□□□□ -0.37
ABR-222	ENST00000573667	NLRP12	P59046	1061 aa		12.75	□□□□□ -0.37
ABR-222	ENST00000573667	SGSM1	Q2NKQ1	1148 aa		12.75	□□□□□ -0.37
ABR-222	ENST00000573667	ZACN	Q401N2	412 aa		12.75	□□□□□ -0.37
ABR-222	ENST00000573667	MDH1B	Q5I0G3	518 aa		12.75	□□□□□ -0.37
ABR-222	ENST00000573667	ZNF658	Q5TYW1	1059 aa	Predicted RBP	12.75	□□□□□ -0.37
ABR-222	ENST00000573667	SDHAF4	Q5VUM1	108 aa		12.75	□□□□□ -0.37
ABR-222	ENST00000573667	ZNF852	Q6ZMS4	543 aa		12.75	□□□□□ -0.37
ABR-222	ENST00000573667	ALYREF	Q86V81	257 aa	Known RBP	12.75	□□□□□ -0.37
ABR-222	ENST00000573667	GPIHBP1	Q8IV16	184 aa		12.75	□□□□□ -0.37
ABR-222	ENST00000573667	FANCM	Q8IYD8	2048 aa		12.75	□□□□□ -0.37
ABR-222	ENST00000573667	FAM186B	Q8IYM0	893 aa		12.75	□□□□□ -0.37
ABR-222	ENST00000573667	STKLD1	Q8NE28	680 aa		12.75	□□□□□ -0.37
ABR-222	ENST00000573667	MYCBPAP	Q8TBZ2	947 aa		12.75	□□□□□ -0.37
ABR-222	ENST00000573667	TRMT2B	Q96GJ1	504 aa	Known RBP	12.75	□□□□□ -0.37
ABR-222	ENST00000573667	PCED1B	Q96HM7	432 aa		12.75	□□□□□ -0.37
ABR-222	ENST00000573667	TIGD1	Q96MW7	591 aa		12.75	□□□□□ -0.37
ABR-222	ENST00000573667	TSG101	Q99816	390 aa		12.75	□□□□□ -0.37
ABR-222	ENST00000573667	BCO2	Q9BYV7	579 aa		12.75	□□□□□ -0.37
ABR-222	ENST00000573667	GTPBP4	Q9BZE4	634 aa	Known RBP	12.75	□□□□□ -0.37
ABR-222	ENST00000573667	IMPG2	Q9BZV3	1241 aa		12.75	□□□□□ -0.37
ABR-222	ENST00000573667	XYLT2	Q9H1B5	865 aa		12.75	□□□□□ -0.37
ABR-222	ENST00000573667	VRTN	Q9H8Y1	702 aa		12.75	□□□□□ -0.37
ABR-222	ENST00000573667	IL21	Q9HBE4	155 aa		12.75	□□□□□ -0.37
ABR-222	ENST00000573667	CRTAC1	Q9NQ79	661 aa		12.75	□□□□□ -0.37
ABR-222	ENST00000573667	TRPV5	Q9NQA5	729 aa		12.75	□□□□□ -0.37
ABR-222	ENST00000573667	OBP2A	Q9NY56	170 aa		12.75	□□□□□ -0.37
ABR-222	ENST00000573667	EHD2	Q9NZN4	543 aa		12.75	□□□□□ -0.37
ABR-222	ENST00000573667	ATP8B3	O60423	1300 aa		12.74	□□□□□ -0.37
ABR-222	ENST00000573667	FAM170B	A6NMN3	283 aa		12.74	□□□□□ -0.37
ABR-222	ENST00000573667	SOBP	A7XYQ1	873 aa		12.74	□□□□□ -0.37
ABR-222	ENST00000573667	MAN2B1	O00754	1011 aa		12.74	□□□□□ -0.37
ABR-222	ENST00000573667	CHAD	O15335	359 aa		12.74	□□□□□ -0.37
ABR-222	ENST00000573667	KIN	O60870	393 aa	Known RBP	12.74	□□□□□ -0.37
ABR-222	ENST00000573667	AKAP3	O75969	853 aa		12.74	□□□□□ -0.37
ABR-222	ENST00000573667	NOL4	O94818	638 aa		12.74	□□□□□ -0.37
ABR-222	ENST00000573667	F11	P03951	625 aa		12.74	□□□□□ -0.37
ABR-222	ENST00000573667	HMGA1	P17096	107 aa	Known RBP	12.74	□□□□□ -0.37
ABR-222	ENST00000573667	PTPN1	P18031	435 aa	Known RBP	12.74	□□□□□ -0.37
ABR-222	ENST00000573667	BDNF	P23560	247 aa		12.74	□□□□□ -0.37
ABR-222	ENST00000573667	WEE1	P30291	646 aa		12.74	□□□□□ -0.37
ABR-222	ENST00000573667	HOXD11	P31277	338 aa	Predicted RBP	12.74	□□□□□ -0.37
ABR-222	ENST00000573667	MAGEA9	P43362	315 aa		12.74	□□□□□ -0.37
ABR-222	ENST00000573667	ANGPT1	Q15389	498 aa		12.74	□□□□□ -0.37
ABR-222	ENST00000573667	CCDC142	Q17RM4	750 aa		12.74	□□□□□ -0.37
ABR-222	ENST00000573667	EDRF1	Q3B7T1	1238 aa		12.74	□□□□□ -0.37
ABR-222	ENST00000573667	ARHGAP29	Q52LW3	1261 aa		12.74	□□□□□ -0.37
ABR-222	ENST00000573667	SCARA5	Q6ZMJ2	495 aa		12.74	□□□□□ -0.37
ABR-222	ENST00000573667	SV2A	Q7L0J3	742 aa		12.74	□□□□□ -0.37
ABR-222	ENST00000573667	SMYD4	Q8IYR2	804 aa	Predicted RBP	12.74	□□□□□ -0.37
ABR-222	ENST00000573667	CMTM8	Q8IZV2	173 aa		12.74	□□□□□ -0.37
ABR-222	ENST00000573667	CELF5	Q8N6W0	485 aa	Known RBP	12.74	□□□□□ -0.37
ABR-222	ENST00000573667	MAB21L3	Q8N8X9	362 aa		12.74	□□□□□ -0.37
ABR-222	ENST00000573667	CCDC150	Q8NCX0	1101 aa		12.74	□□□□□ -0.37
ABR-222	ENST00000573667	ENGASE	Q8NFI3	743 aa		12.74	□□□□□ -0.37
ABR-222	ENST00000573667	BPIFB1	Q8TDL5	484 aa		12.74	□□□□□ -0.37

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