RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-215ENST00000573550 HKR1P10072 659 aa5.89□□□□□ -1.47
CDC27-215ENST00000573550 DEKP35659 375 aaKnown RBP5.89□□□□□ -1.47
CDC27-215ENST00000573550 ZNF135P52742 658 aaPredicted RBP5.89□□□□□ -1.47
CDC27-215ENST00000573550 USP14P54578 494 aa5.89□□□□□ -1.47
CDC27-215ENST00000573550 PIGFQ07326 219 aa5.89□□□□□ -1.47
CDC27-215ENST00000573550 TCF15Q12870 199 aa5.89□□□□□ -1.47
CDC27-215ENST00000573550 FOXI1Q12951 378 aa5.89□□□□□ -1.47
CDC27-215ENST00000573550 CRB2Q5IJ48 1285 aa5.89□□□□□ -1.47
CDC27-215ENST00000573550 FAM102BQ5T8I3 360 aa5.89□□□□□ -1.47
CDC27-215ENST00000573550 SP5Q6BEB4 398 aaPredicted RBP5.89□□□□□ -1.47
CDC27-215ENST00000573550 TAPT1Q6NXT6 567 aa5.89□□□□□ -1.47
CDC27-215ENST00000573550 CLNKQ7Z7G1 428 aa5.89□□□□□ -1.47
CDC27-215ENST00000573550 DENND1CQ8IV53 801 aa5.89□□□□□ -1.47
CDC27-215ENST00000573550 COLGALT2Q8IYK4 626 aa5.89□□□□□ -1.47
CDC27-215ENST00000573550 AFAP1Q8N556 730 aa5.89□□□□□ -1.47
CDC27-215ENST00000573550 KLHDC4Q8TBB5 520 aa5.89□□□□□ -1.47
CDC27-215ENST00000573550 TNPO1Q92973 898 aaKnown RBP5.89□□□□□ -1.47
CDC27-215ENST00000573550 CDK5RAP3Q96JB5 506 aa5.89□□□□□ -1.47
CDC27-215ENST00000573550 Q96MF0 132 aa5.89□□□□□ -1.47
CDC27-215ENST00000573550 ACO2Q99798 780 aaKnown RBP5.89□□□□□ -1.47
CDC27-215ENST00000573550 TBCCD1Q9NVR7 557 aa5.89□□□□□ -1.47
CDC27-215ENST00000573550 MRPS18AQ9NVS2 196 aaKnown RBP5.89□□□□□ -1.47
CDC27-215ENST00000573550 ETAA1Q9NY74 926 aa5.89□□□□□ -1.47
CDC27-215ENST00000573550 GABBR1Q9UBS5 961 aa5.89□□□□□ -1.47
CDC27-215ENST00000573550 TESQ9UGI8 421 aaKnown RBP5.89□□□□□ -1.47
CDC27-215ENST00000573550 AGAP1Q9UPQ3 857 aa5.89□□□□□ -1.47
CDC27-215ENST00000573550 NEU2Q9Y3R4 380 aa5.89□□□□□ -1.47
CDC27-215ENST00000573550 PCDHA1Q9Y5I3 950 aa5.89□□□□□ -1.47
CDC27-215ENST00000573550 KIF20BQ96Q89 1820 aa5.89□□□□□ -1.47
CDC27-215ENST00000573550 MAST3O60307 1309 aa5.89□□□□□ -1.47
CDC27-215ENST00000573550 NSD3Q9BZ95 1437 aa5.89□□□□□ -1.47
CDC27-215ENST00000573550 COL3A1P02461 1466 aaPredicted RBP5.89□□□□□ -1.47
CDC27-215ENST00000573550 TMEM131LA2VDJ0 1609 aa5.88□□□□□ -1.47
CDC27-215ENST00000573550 H3BUI4 141 aa5.88□□□□□ -1.47
CDC27-215ENST00000573550 KIF3BO15066 747 aa5.88□□□□□ -1.47
CDC27-215ENST00000573550 CHEK2O96017 543 aa5.88□□□□□ -1.47
CDC27-215ENST00000573550 TYRP1P17643 537 aa5.88□□□□□ -1.47
CDC27-215ENST00000573550 AVPR1BP47901 424 aa5.88□□□□□ -1.47
CDC27-215ENST00000573550 ANXA11P50995 505 aaKnown RBP5.88□□□□□ -1.47
CDC27-215ENST00000573550 SEC24CP53992 1094 aa5.88□□□□□ -1.47
CDC27-215ENST00000573550 PPP2R5AQ15172 486 aa5.88□□□□□ -1.47
CDC27-215ENST00000573550 CCDC157Q569K6 752 aa5.88□□□□□ -1.47
CDC27-215ENST00000573550 EMC10Q5UCC4 262 aa5.88□□□□□ -1.47
CDC27-215ENST00000573550 NXNQ6DKJ4 435 aa5.88□□□□□ -1.47
CDC27-215ENST00000573550 CXorf57Q6NSI4 855 aaKnown RBP5.88□□□□□ -1.47
CDC27-215ENST00000573550 LNX2Q8N448 690 aa5.88□□□□□ -1.47
CDC27-215ENST00000573550 CAMKK1Q8N5S9 505 aa5.88□□□□□ -1.47
CDC27-215ENST00000573550 SSH3Q8TE77 659 aa5.88□□□□□ -1.47
CDC27-215ENST00000573550 TMEM125Q96AQ2 219 aa5.88□□□□□ -1.47
CDC27-215ENST00000573550 TRIB1Q96RU8 372 aa5.88□□□□□ -1.47
CDC27-215ENST00000573550 LRFN3Q9BTN0 628 aa5.88□□□□□ -1.47
CDC27-215ENST00000573550 TINAGL1Q9GZM7 467 aaPredicted RBP5.88□□□□□ -1.47
CDC27-215ENST00000573550 NOB1Q9ULX3 412 aaKnown RBP5.88□□□□□ -1.47
CDC27-215ENST00000573550 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.88□□□□□ -1.47
CDC27-215ENST00000573550 ABCC11Q96J66 1382 aa5.88□□□□□ -1.47
CDC27-215ENST00000573550 CD109Q6YHK3 1445 aa5.88□□□□□ -1.47
CDC27-215ENST00000573550 AGLP35573 1532 aa5.88□□□□□ -1.47
CDC27-215ENST00000573550 TRGV11A0A075B6L2 103 aa5.87□□□□□ -1.47
CDC27-215ENST00000573550 UBXN7O94888 489 aa5.87□□□□□ -1.47
CDC27-215ENST00000573550 RHOBTB3O94955 611 aa5.87□□□□□ -1.47
CDC27-215ENST00000573550 RPS7P62081 194 aaKnown RBP5.87□□□□□ -1.47
CDC27-215ENST00000573550 RAB1AP62820 205 aa5.87□□□□□ -1.47
CDC27-215ENST00000573550 PURAQ00577 322 aaKnown RBP5.87□□□□□ -1.47
CDC27-215ENST00000573550 DYRK1AQ13627 763 aa5.87□□□□□ -1.47
CDC27-215ENST00000573550 HABP2Q14520 560 aaPredicted RBP5.87□□□□□ -1.47
CDC27-215ENST00000573550 PPP1R32Q7Z5V6 425 aa5.87□□□□□ -1.47
CDC27-215ENST00000573550 WDR63Q8IWG1 891 aa5.87□□□□□ -1.47
CDC27-215ENST00000573550 TCEAL8Q8IYN2 117 aa5.87□□□□□ -1.47
CDC27-215ENST00000573550 CHPFQ8IZ52 775 aa5.87□□□□□ -1.47
CDC27-215ENST00000573550 ADGRG5Q8IZF4 528 aa5.87□□□□□ -1.47
CDC27-215ENST00000573550 SLC44A3Q8N4M1 653 aa5.87□□□□□ -1.47
CDC27-215ENST00000573550 CELF5Q8N6W0 485 aaKnown RBP5.87□□□□□ -1.47
CDC27-215ENST00000573550 SUPT20HQ8NEM7 779 aa5.87□□□□□ -1.47
CDC27-215ENST00000573550 GPR150Q8NGU9 434 aa5.87□□□□□ -1.47
CDC27-215ENST00000573550 PPP1R35Q8TAP8 253 aa5.87□□□□□ -1.47
CDC27-215ENST00000573550 POC1BQ8TC44 478 aa5.87□□□□□ -1.47
CDC27-215ENST00000573550 BRIX1Q8TDN6 353 aaKnown RBP5.87□□□□□ -1.47
CDC27-215ENST00000573550 RUNDC1Q96C34 613 aa5.87□□□□□ -1.47
CDC27-215ENST00000573550 PTCD3Q96EY7 689 aaKnown RBP5.87□□□□□ -1.47
CDC27-215ENST00000573550 SMOQ99835 787 aa5.87□□□□□ -1.47
CDC27-215ENST00000573550 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.87□□□□□ -1.47
CDC27-215ENST00000573550 G3BP2Q9UN86 482 aaKnown RBP5.87□□□□□ -1.47
CDC27-215ENST00000573550 ADGRF5Q8IZF2 1346 aa5.87□□□□□ -1.47
CDC27-215ENST00000573550 PTPRMP28827 1452 aa5.87□□□□□ -1.47
CDC27-215ENST00000573550 NLRP1Q9C000 1473 aa5.87□□□□□ -1.47
CDC27-215ENST00000573550 SETD1AO15047 1707 aaKnown RBP5.86□□□□□ -1.47
CDC27-215ENST00000573550 KNDC1Q76NI1 1749 aa5.86□□□□□ -1.47
CDC27-215ENST00000573550 ATP7BP35670 1465 aa5.86□□□□□ -1.47
CDC27-215ENST00000573550 A0A088AWK7 358 aa5.86□□□□□ -1.47
CDC27-215ENST00000573550 E7ENX8 843 aa5.86□□□□□ -1.47
CDC27-215ENST00000573550 POLRMTO00411 1230 aaKnown RBP5.86□□□□□ -1.47
CDC27-215ENST00000573550 TOR1BO14657 336 aa5.86□□□□□ -1.47
CDC27-215ENST00000573550 ESRRBO95718 433 aa5.86□□□□□ -1.47
CDC27-215ENST00000573550 GATA3P23771 443 aa5.86□□□□□ -1.47
CDC27-215ENST00000573550 ADRA1BP35368 520 aa5.86□□□□□ -1.47
CDC27-215ENST00000573550 MPLP40238 635 aa5.86□□□□□ -1.47
CDC27-215ENST00000573550 TOB1P50616 345 aaPredicted RBP5.86□□□□□ -1.47
CDC27-215ENST00000573550 TAP2Q03519 686 aa5.86□□□□□ -1.47
CDC27-215ENST00000573550 EXOSC9Q06265 439 aaKnown RBP5.86□□□□□ -1.47
CDC27-215ENST00000573550 KRTAP15-1Q3LI76 137 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms