RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 KINO60870 393 aaKnown RBP19.42■□□□□ 0.7
CHD3-214ENST00000572579 LHX1P48742 406 aa19.42■□□□□ 0.7
CHD3-214ENST00000572579 KPNA1P52294 538 aaPredicted RBP19.42■□□□□ 0.7
CHD3-214ENST00000572579 PSMC1P62191 440 aaKnown RBP19.42■□□□□ 0.7
CHD3-214ENST00000572579 CYP24A1Q07973 514 aa19.42■□□□□ 0.7
CHD3-214ENST00000572579 SNRNP35Q16560 246 aaKnown RBP19.42■□□□□ 0.7
CHD3-214ENST00000572579 BMT2Q1RMZ1 405 aa19.42■□□□□ 0.7
CHD3-214ENST00000572579 TRIM68Q6AZZ1 485 aa19.42■□□□□ 0.7
CHD3-214ENST00000572579 MON1AQ86VX9 555 aa19.42■□□□□ 0.7
CHD3-214ENST00000572579 WDR49Q8IV35 697 aa19.42■□□□□ 0.7
CHD3-214ENST00000572579 CELF5Q8N6W0 485 aaKnown RBP19.42■□□□□ 0.7
CHD3-214ENST00000572579 ATRIPQ8WXE1 791 aa19.42■□□□□ 0.7
CHD3-214ENST00000572579 ANKRD36BP1Q96IX9 119 aa19.42■□□□□ 0.7
CHD3-214ENST00000572579 MYRFLQ96LU7 910 aa19.42■□□□□ 0.7
CHD3-214ENST00000572579 CYP2S1Q96SQ9 504 aa19.42■□□□□ 0.7
CHD3-214ENST00000572579 MRPL45Q9BRJ2 306 aaKnown RBP19.42■□□□□ 0.7
CHD3-214ENST00000572579 C8orf33Q9H7E9 229 aaPredicted RBP19.42■□□□□ 0.7
CHD3-214ENST00000572579 SERTAD1Q9UHV2 236 aa19.42■□□□□ 0.7
CHD3-214ENST00000572579 MIA3Q5JRA6 1907 aa19.42■□□□□ 0.7
CHD3-214ENST00000572579 ACTN4O43707 911 aaKnown RBP19.41■□□□□ 0.7
CHD3-214ENST00000572579 PDGFRBP09619 1106 aa19.41■□□□□ 0.7
CHD3-214ENST00000572579 ME1P48163 572 aa19.41■□□□□ 0.7
CHD3-214ENST00000572579 CYP2J2P51589 502 aa19.41■□□□□ 0.7
CHD3-214ENST00000572579 MYL7Q01449 175 aa19.41■□□□□ 0.7
CHD3-214ENST00000572579 PSMD6Q15008 389 aa19.41■□□□□ 0.7
CHD3-214ENST00000572579 PON2Q15165 354 aa19.41■□□□□ 0.7
CHD3-214ENST00000572579 TAF12Q16514 161 aa19.41■□□□□ 0.7
CHD3-214ENST00000572579 CFAP221Q4G0U5 840 aa19.41■□□□□ 0.7
CHD3-214ENST00000572579 STXBP4Q6ZWJ1 553 aa19.41■□□□□ 0.7
CHD3-214ENST00000572579 DPH6Q7L8W6 267 aa19.41■□□□□ 0.7
CHD3-214ENST00000572579 RALGPS2Q86X27 583 aaPredicted RBP19.41■□□□□ 0.7
CHD3-214ENST00000572579 HSCBQ8IWL3 235 aa19.41■□□□□ 0.7
CHD3-214ENST00000572579 SPATA18Q8TC71 538 aa19.41■□□□□ 0.7
CHD3-214ENST00000572579 RUBCNQ92622 972 aa19.41■□□□□ 0.7
CHD3-214ENST00000572579 CCDC127Q96BQ5 260 aa19.41■□□□□ 0.7
CHD3-214ENST00000572579 RMDN1Q96DB5 314 aa19.41■□□□□ 0.7
CHD3-214ENST00000572579 FBRSL1Q9HCM7 1045 aaKnown RBP19.41■□□□□ 0.7
CHD3-214ENST00000572579 TMEM30AQ9NV96 361 aa19.41■□□□□ 0.7
CHD3-214ENST00000572579 PATJQ8NI35 1801 aa19.41■□□□□ 0.7
CHD3-214ENST00000572579 TICRRQ7Z2Z1 1910 aa19.41■□□□□ 0.7
CHD3-214ENST00000572579 PVALEFA0A1B0GWK0 134 aa19.4■□□□□ 0.7
CHD3-214ENST00000572579 K7ESF4 209 aa19.4■□□□□ 0.7
CHD3-214ENST00000572579 TNNC2P02585 160 aa19.4■□□□□ 0.7
CHD3-214ENST00000572579 CSH1P0DML2 217 aa19.4■□□□□ 0.7
CHD3-214ENST00000572579 CSH2P0DML3 217 aa19.4■□□□□ 0.7
CHD3-214ENST00000572579 DLATP10515 647 aaKnown RBP19.4■□□□□ 0.7
CHD3-214ENST00000572579 TGM1P22735 817 aa19.4■□□□□ 0.7
CHD3-214ENST00000572579 WARSP23381 471 aaKnown RBP19.4■□□□□ 0.7
CHD3-214ENST00000572579 CASP4P49662 377 aa19.4■□□□□ 0.7
CHD3-214ENST00000572579 USP46P62068 366 aa19.4■□□□□ 0.7
CHD3-214ENST00000572579 STK4Q13043 487 aa19.4■□□□□ 0.7
CHD3-214ENST00000572579 CCINQ13939 588 aa19.4■□□□□ 0.7
CHD3-214ENST00000572579 SURF1Q15526 300 aa19.4■□□□□ 0.7
CHD3-214ENST00000572579 NAIF1Q69YI7 327 aaPredicted RBP19.4■□□□□ 0.7
CHD3-214ENST00000572579 PKN3Q6P5Z2 889 aa19.4■□□□□ 0.7
CHD3-214ENST00000572579 MYLPFQ96A32 169 aa19.4■□□□□ 0.7
CHD3-214ENST00000572579 ELMO3Q96BJ8 720 aa19.4■□□□□ 0.7
CHD3-214ENST00000572579 TRMT2BQ96GJ1 504 aaKnown RBP19.4■□□□□ 0.7
CHD3-214ENST00000572579 PAGE5Q96GU1 130 aa19.4■□□□□ 0.7
CHD3-214ENST00000572579 CGRRF1Q99675 332 aa19.4■□□□□ 0.7
CHD3-214ENST00000572579 SYT15Q9BQS2 421 aa19.4■□□□□ 0.7
CHD3-214ENST00000572579 XYLT2Q9H1B5 865 aa19.4■□□□□ 0.7
CHD3-214ENST00000572579 EPC1Q9H2F5 836 aa19.4■□□□□ 0.7
CHD3-214ENST00000572579 MAGEF1Q9HAY2 307 aa19.4■□□□□ 0.7
CHD3-214ENST00000572579 KIAA1586Q9HCI6 787 aa19.4■□□□□ 0.7
CHD3-214ENST00000572579 CEP250Q9BV73 2442 aa19.39■□□□□ 0.69
CHD3-214ENST00000572579 ARSAP15289 507 aa19.39■□□□□ 0.69
CHD3-214ENST00000572579 PCSK1P29120 753 aa19.39■□□□□ 0.69
CHD3-214ENST00000572579 CACNA2D1P54289 1103 aa19.39■□□□□ 0.69
CHD3-214ENST00000572579 RPL10AP62906 217 aaKnown RBP19.39■□□□□ 0.69
CHD3-214ENST00000572579 ZXDBP98169 803 aa19.39■□□□□ 0.69
CHD3-214ENST00000572579 MYO1EQ12965 1108 aa19.39■□□□□ 0.69
CHD3-214ENST00000572579 SPATA2LQ8IUW3 424 aaPredicted RBP19.39■□□□□ 0.69
CHD3-214ENST00000572579 SCN4BQ8IWT1 228 aa19.39■□□□□ 0.69
CHD3-214ENST00000572579 C12orf56Q8IXR9 622 aa19.39■□□□□ 0.69
CHD3-214ENST00000572579 SPEM1Q8N4L4 309 aa19.39■□□□□ 0.69
CHD3-214ENST00000572579 XXYLT1Q8NBI6 393 aa19.39■□□□□ 0.69
CHD3-214ENST00000572579 KIAA0895Q8NCT3 520 aa19.39■□□□□ 0.69
CHD3-214ENST00000572579 GCNAQ96QF7 691 aa19.39■□□□□ 0.69
CHD3-214ENST00000572579 EBF3Q9H4W6 596 aa19.39■□□□□ 0.69
CHD3-214ENST00000572579 TDP1Q9NUW8 608 aa19.39■□□□□ 0.69
CHD3-214ENST00000572579 GCNT4Q9P109 453 aa19.39■□□□□ 0.69
CHD3-214ENST00000572579 CDH9Q9ULB4 789 aa19.39■□□□□ 0.69
CHD3-214ENST00000572579 C2orf78A6NCI8 922 aa19.38■□□□□ 0.69
CHD3-214ENST00000572579 HRO43593 1189 aa19.38■□□□□ 0.69
CHD3-214ENST00000572579 SLFN14P0C7P3 912 aa19.38■□□□□ 0.69
CHD3-214ENST00000572579 BDNFP23560 247 aa19.38■□□□□ 0.69
CHD3-214ENST00000572579 DDX6P26196 483 aaKnown RBP eCLIP19.38■□□□□ 0.69
CHD3-214ENST00000572579 MAGEA11P43364 429 aa19.38■□□□□ 0.69
CHD3-214ENST00000572579 ID4P47928 161 aa19.38■□□□□ 0.69
CHD3-214ENST00000572579 CXCL12P48061 93 aa19.38■□□□□ 0.69
CHD3-214ENST00000572579 MYL6P60660 151 aa19.38■□□□□ 0.69
CHD3-214ENST00000572579 PLCB2Q00722 1185 aa19.38■□□□□ 0.69
CHD3-214ENST00000572579 KNOP1Q1ED39 458 aaKnown RBP19.38■□□□□ 0.69
CHD3-214ENST00000572579 ITPRIPL2Q3MIP1 535 aa19.38■□□□□ 0.69
CHD3-214ENST00000572579 ATL3Q6DD88 541 aa19.38■□□□□ 0.69
CHD3-214ENST00000572579 MSANTD3Q96H12 275 aa19.38■□□□□ 0.69
CHD3-214ENST00000572579 PCED1BQ96HM7 432 aa19.38■□□□□ 0.69
CHD3-214ENST00000572579 FUBP3Q96I24 572 aaKnown RBP eCLIP19.38■□□□□ 0.69
CHD3-214ENST00000572579 DPEP3Q9H4B8 488 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms