RNA–Protein interactions for RNA: ENST00000571613.5

RPAIN-210, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,688 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-210ENST00000571613 VSNL1P62760 191 aa20.51■□□□□ 0.87
RPAIN-210ENST00000571613 FAM189BP81408 668 aa20.51■□□□□ 0.87
RPAIN-210ENST00000571613 BST2Q10589 180 aaKnown RBP20.51■□□□□ 0.87
RPAIN-210ENST00000571613 TUSC3Q13454 348 aa20.51■□□□□ 0.87
RPAIN-210ENST00000571613 UPP1Q16831 310 aa20.51■□□□□ 0.87
RPAIN-210ENST00000571613 CC2D1AQ6P1N0 951 aaPredicted RBP20.51■□□□□ 0.87
RPAIN-210ENST00000571613 GLB1LQ6UWU2 654 aa20.51■□□□□ 0.87
RPAIN-210ENST00000571613 DSTYKQ6XUX3 929 aa20.51■□□□□ 0.87
RPAIN-210ENST00000571613 IFT20Q8IY31 132 aa20.51■□□□□ 0.87
RPAIN-210ENST00000571613 DEFB118Q96PH6 123 aa20.51■□□□□ 0.87
RPAIN-210ENST00000571613 SLC4A5Q9BY07 1137 aa20.51■□□□□ 0.87
RPAIN-210ENST00000571613 RNF208Q9H0X6 261 aa20.51■□□□□ 0.87
RPAIN-210ENST00000571613 ST7Q9NRC1 585 aa20.51■□□□□ 0.87
RPAIN-210ENST00000571613 RNF216Q9NWF9 866 aaPredicted RBP20.51■□□□□ 0.87
RPAIN-210ENST00000571613 KANSL3Q9P2N6 904 aa20.51■□□□□ 0.87
RPAIN-210ENST00000571613 PARNO95453 639 aaKnown RBP20.5■□□□□ 0.87
RPAIN-210ENST00000571613 ERBB2P04626 1255 aa20.5■□□□□ 0.87
RPAIN-210ENST00000571613 PYGMP11217 842 aa20.5■□□□□ 0.87
RPAIN-210ENST00000571613 FGFR1P11362 822 aa20.5■□□□□ 0.87
RPAIN-210ENST00000571613 CCL5P13501 91 aa20.5■□□□□ 0.87
RPAIN-210ENST00000571613 DESP17661 470 aa20.5■□□□□ 0.87
RPAIN-210ENST00000571613 TNFRSF8P28908 595 aa20.5■□□□□ 0.87
RPAIN-210ENST00000571613 ACADSBP45954 432 aa20.5■□□□□ 0.87
RPAIN-210ENST00000571613 MARCKSL1P49006 195 aa20.5■□□□□ 0.87
RPAIN-210ENST00000571613 CLCNKBP51801 687 aa20.5■□□□□ 0.87
RPAIN-210ENST00000571613 ZNF211Q13398 564 aaPredicted RBP20.5■□□□□ 0.87
RPAIN-210ENST00000571613 TMEM110Q86TL2 294 aa20.5■□□□□ 0.87
RPAIN-210ENST00000571613 KATNAL2Q8IYT4 538 aa20.5■□□□□ 0.87
RPAIN-210ENST00000571613 B3GALNT2Q8NCR0 500 aa20.5■□□□□ 0.87
RPAIN-210ENST00000571613 SLC35F5Q8WV83 523 aa20.5■□□□□ 0.87
RPAIN-210ENST00000571613 AP1M1Q9BXS5 423 aa20.5■□□□□ 0.87
RPAIN-210ENST00000571613 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.5■□□□□ 0.87
RPAIN-210ENST00000571613 DSEQ9UL01 958 aa20.5■□□□□ 0.87
RPAIN-210ENST00000571613 GOLGA8SH3BPF8 625 aa20.49■□□□□ 0.87
RPAIN-210ENST00000571613 SART1O43290 800 aaKnown RBP20.49■□□□□ 0.87
RPAIN-210ENST00000571613 PDGFRBP09619 1106 aa20.49■□□□□ 0.87
RPAIN-210ENST00000571613 SLC13A5Q86YT5 568 aaPredicted RBP20.49■□□□□ 0.87
RPAIN-210ENST00000571613 EXD1Q8NHP7 514 aa20.49■□□□□ 0.87
RPAIN-210ENST00000571613 URGCPQ8TCY9 931 aa20.49■□□□□ 0.87
RPAIN-210ENST00000571613 APBB2Q92870 758 aa20.49■□□□□ 0.87
RPAIN-210ENST00000571613 HSFY1Q96LI6 401 aa20.49■□□□□ 0.87
RPAIN-210ENST00000571613 NCAPGQ9BPX3 1015 aa20.49■□□□□ 0.87
RPAIN-210ENST00000571613 FAM49BQ9NUQ9 324 aa20.49■□□□□ 0.87
RPAIN-210ENST00000571613 DDX56Q9NY93 547 aaKnown RBP20.49■□□□□ 0.87
RPAIN-210ENST00000571613 NME7Q9Y5B8 376 aa20.49■□□□□ 0.87
RPAIN-210ENST00000571613 ZRANB2O95218 330 aaKnown RBP eCLIP20.48■□□□□ 0.87
RPAIN-210ENST00000571613 PFKMP08237 780 aa20.48■□□□□ 0.87
RPAIN-210ENST00000571613 ODC1P11926 461 aa20.48■□□□□ 0.87
RPAIN-210ENST00000571613 PSMA2P25787 234 aa20.48■□□□□ 0.87
RPAIN-210ENST00000571613 LMO2P25791 158 aa20.48■□□□□ 0.87
RPAIN-210ENST00000571613 SCNN1AP37088 669 aa20.48■□□□□ 0.87
RPAIN-210ENST00000571613 MBTPS1Q14703 1052 aa20.48■□□□□ 0.87
RPAIN-210ENST00000571613 HADHQ16836 314 aaKnown RBP20.48■□□□□ 0.87
RPAIN-210ENST00000571613 WSCD1Q658N2 575 aa20.48■□□□□ 0.87
RPAIN-210ENST00000571613 POLNQ7Z5Q5 900 aa20.48■□□□□ 0.87
RPAIN-210ENST00000571613 TTC30AQ86WT1 665 aa20.48■□□□□ 0.87
RPAIN-210ENST00000571613 KLHL7Q8IXQ5 586 aa20.48■□□□□ 0.87
RPAIN-210ENST00000571613 EIF1ADQ8N9N8 165 aaKnown RBP20.48■□□□□ 0.87
RPAIN-210ENST00000571613 RBM41Q96IZ5 413 aaKnown RBP20.48■□□□□ 0.87
RPAIN-210ENST00000571613 HNRNPABQ99729 332 aaKnown RBP20.48■□□□□ 0.87
RPAIN-210ENST00000571613 ELAC1Q9H777 363 aaKnown RBP20.48■□□□□ 0.87
RPAIN-210ENST00000571613 WBP1LQ9NX94 342 aa20.48■□□□□ 0.87
RPAIN-210ENST00000571613 USTQ9Y2C2 406 aa20.48■□□□□ 0.87
RPAIN-210ENST00000571613 POMCP01189 267 aa20.48■□□□□ 0.87
RPAIN-210ENST00000571613 PCSK1P29120 753 aa20.48■□□□□ 0.87
RPAIN-210ENST00000571613 CHRNA3P32297 505 aa20.48■□□□□ 0.87
RPAIN-210ENST00000571613 RFC1P35251 1148 aaPredicted RBP20.48■□□□□ 0.87
RPAIN-210ENST00000571613 SSR1P43307 286 aaKnown RBP20.48■□□□□ 0.87
RPAIN-210ENST00000571613 FAM102AQ5T9C2 384 aaPredicted RBP20.48■□□□□ 0.87
RPAIN-210ENST00000571613 OR6B2Q6IFH4 312 aa20.48■□□□□ 0.87
RPAIN-210ENST00000571613 DCLRE1AQ6PJP8 1040 aa20.48■□□□□ 0.87
RPAIN-210ENST00000571613 CCNI2Q6ZMN8 369 aaPredicted RBP20.48■□□□□ 0.87
RPAIN-210ENST00000571613 METTL23Q86XA0 190 aa20.48■□□□□ 0.87
RPAIN-210ENST00000571613 RCOR2Q8IZ40 523 aa20.48■□□□□ 0.87
RPAIN-210ENST00000571613 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.48■□□□□ 0.872e-7■■■■■ 32.7
RPAIN-210ENST00000571613 RSPH1Q8WYR4 309 aa20.48■□□□□ 0.87
RPAIN-210ENST00000571613 DPEP3Q9H4B8 488 aa20.48■□□□□ 0.87
RPAIN-210ENST00000571613 HOMER3Q9NSC5 361 aa20.48■□□□□ 0.87
RPAIN-210ENST00000571613 CASTOR2A6NHX0 329 aa20.47■□□□□ 0.87
RPAIN-210ENST00000571613 FSCN2O14926 492 aa20.47■□□□□ 0.87
RPAIN-210ENST00000571613 B3GAT3O94766 335 aa20.47■□□□□ 0.87
RPAIN-210ENST00000571613 PTPN1P18031 435 aaKnown RBP20.47■□□□□ 0.87
RPAIN-210ENST00000571613 RPL34P49207 117 aaKnown RBP20.47■□□□□ 0.87
RPAIN-210ENST00000571613 AFF1P51825 1210 aaKnown RBP20.47■□□□□ 0.87
RPAIN-210ENST00000571613 COPS2P61201 443 aa20.47■□□□□ 0.87
RPAIN-210ENST00000571613 PDE4CQ08493 712 aa20.47■□□□□ 0.87
RPAIN-210ENST00000571613 DHX34Q14147 1143 aaKnown RBP20.47■□□□□ 0.87
RPAIN-210ENST00000571613 ODF2Q5BJF6 829 aa20.47■□□□□ 0.87
RPAIN-210ENST00000571613 SEPT8Q92599 483 aa20.47■□□□□ 0.87
RPAIN-210ENST00000571613 METTL5Q9NRN9 209 aaKnown RBP20.47■□□□□ 0.87
RPAIN-210ENST00000571613 ASNSD1Q9NWL6 643 aa20.47■□□□□ 0.87
RPAIN-210ENST00000571613 TMEM161AQ9NX61 479 aa20.47■□□□□ 0.87
RPAIN-210ENST00000571613 DDX43Q9NXZ2 648 aaKnown RBP20.47■□□□□ 0.87
RPAIN-210ENST00000571613 DMGDHQ9UI17 866 aaKnown RBP20.47■□□□□ 0.87
RPAIN-210ENST00000571613 CDH9Q9ULB4 789 aa20.47■□□□□ 0.87
RPAIN-210ENST00000571613 E5RJQ4 531 aa20.46■□□□□ 0.87
RPAIN-210ENST00000571613 PHF2O75151 1096 aa20.46■□□□□ 0.87
RPAIN-210ENST00000571613 RNF8O76064 485 aa20.46■□□□□ 0.87
RPAIN-210ENST00000571613 HEXIM1O94992 359 aaKnown RBP20.46■□□□□ 0.87
RPAIN-210ENST00000571613 GJB6O95452 261 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms