RNA–Protein interactions for RNA: ENST00000571190.1

CIITA-206, Transcript of class II major histocompatibility complex transactivator, humanhuman

Gene CIITA, Length 479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-206ENST00000571190 STAT6P42226 847 aa18.85■□□□□ 0.61
CIITA-206ENST00000571190 RBP5P82980 135 aa18.85■□□□□ 0.61
CIITA-206ENST00000571190 ALCAMQ13740 583 aa18.85■□□□□ 0.61
CIITA-206ENST00000571190 ZNF268Q14587 947 aaPredicted RBP18.85■□□□□ 0.61
CIITA-206ENST00000571190 FAM160A2Q8N612 972 aaPredicted RBP18.85■□□□□ 0.61
CIITA-206ENST00000571190 TOP6BLQ8N6T0 577 aa18.85■□□□□ 0.61
CIITA-206ENST00000571190 OR5B17Q8NGF7 314 aa18.85■□□□□ 0.61
CIITA-206ENST00000571190 MRPS31Q92665 395 aaKnown RBP18.85■□□□□ 0.61
CIITA-206ENST00000571190 HPS3Q969F9 1004 aa18.85■□□□□ 0.61
CIITA-206ENST00000571190 TRMT2BQ96GJ1 504 aaKnown RBP18.85■□□□□ 0.61
CIITA-206ENST00000571190 KIF9Q9HAQ2 790 aa18.85■□□□□ 0.61
CIITA-206ENST00000571190 NCOR2Q9Y618 2525 aa18.85■□□□□ 0.61
CIITA-206ENST00000571190 ATP2C2O75185 946 aa18.84■□□□□ 0.61
CIITA-206ENST00000571190 KRT19P08727 400 aa18.84■□□□□ 0.61
CIITA-206ENST00000571190 PXNP49023 591 aaPredicted RBP18.84■□□□□ 0.61
CIITA-206ENST00000571190 RPL10AP62906 217 aaKnown RBP18.84■□□□□ 0.61
CIITA-206ENST00000571190 MYL7Q01449 175 aa18.84■□□□□ 0.61
CIITA-206ENST00000571190 CSRP2Q16527 193 aa18.84■□□□□ 0.61
CIITA-206ENST00000571190 CFAP221Q4G0U5 840 aa18.84■□□□□ 0.61
CIITA-206ENST00000571190 FAM171BQ6P995 826 aa18.84■□□□□ 0.61
CIITA-206ENST00000571190 CBWD2Q8IUF1 395 aa18.84■□□□□ 0.61
CIITA-206ENST00000571190 ADGRF2Q8IZF7 708 aa18.84■□□□□ 0.61
CIITA-206ENST00000571190 GPD1LQ8N335 351 aa18.84■□□□□ 0.61
CIITA-206ENST00000571190 PDILTQ8N807 584 aa18.84■□□□□ 0.61
CIITA-206ENST00000571190 SPATA18Q8TC71 538 aa18.84■□□□□ 0.61
CIITA-206ENST00000571190 KBTBD7Q8WVZ9 684 aa18.84■□□□□ 0.61
CIITA-206ENST00000571190 CYP2S1Q96SQ9 504 aa18.84■□□□□ 0.61
CIITA-206ENST00000571190 TMEM206Q9H813 350 aa18.84■□□□□ 0.61
CIITA-206ENST00000571190 INTS13Q9NVM9 706 aa18.84■□□□□ 0.61
CIITA-206ENST00000571190 MYH11P35749 1972 aa18.83■□□□□ 0.61
CIITA-206ENST00000571190 GDF9O60383 454 aa18.83■□□□□ 0.6
CIITA-206ENST00000571190 EGFP01133 1207 aa18.83■□□□□ 0.6
CIITA-206ENST00000571190 LMO2P25791 158 aa18.83■□□□□ 0.6
CIITA-206ENST00000571190 LHX1P48742 406 aa18.83■□□□□ 0.6
CIITA-206ENST00000571190 NASPP49321 788 aaPredicted RBP18.83■□□□□ 0.6
CIITA-206ENST00000571190 GALK1P51570 392 aa18.83■□□□□ 0.6
CIITA-206ENST00000571190 GRSF1Q12849 480 aaKnown RBP eCLIP18.83■□□□□ 0.6
CIITA-206ENST00000571190 ZNF77Q15935 545 aa18.83■□□□□ 0.6
CIITA-206ENST00000571190 PRR23CQ6ZRP0 262 aa18.83■□□□□ 0.6
CIITA-206ENST00000571190 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.83■□□□□ 0.6
CIITA-206ENST00000571190 NOC3LQ8WTT2 800 aaKnown RBP18.83■□□□□ 0.6
CIITA-206ENST00000571190 EZH1Q92800 747 aaPredicted RBP18.83■□□□□ 0.6
CIITA-206ENST00000571190 GCNT4Q9P109 453 aa18.83■□□□□ 0.6
CIITA-206ENST00000571190 UXTQ9UBK9 157 aaPredicted RBP18.83■□□□□ 0.6
CIITA-206ENST00000571190 SCN1AP35498 2009 aa18.83■□□□□ 0.6
CIITA-206ENST00000571190 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.82■□□□□ 0.6
CIITA-206ENST00000571190 SLC30A4O14863 429 aa18.82■□□□□ 0.6
CIITA-206ENST00000571190 TMEM191BP0C7N4 346 aa18.82■□□□□ 0.6
CIITA-206ENST00000571190 FAM160A1Q05DH4 1040 aa18.82■□□□□ 0.6
CIITA-206ENST00000571190 E2F4Q16254 413 aa18.82■□□□□ 0.6
CIITA-206ENST00000571190 CEP68Q76N32 757 aa18.82■□□□□ 0.6
CIITA-206ENST00000571190 SPATA2LQ8IUW3 424 aaPredicted RBP18.82■□□□□ 0.6
CIITA-206ENST00000571190 LINC00301Q8NCQ3 95 aa18.82■□□□□ 0.6
CIITA-206ENST00000571190 NETO1Q8TDF5 533 aa18.82■□□□□ 0.6
CIITA-206ENST00000571190 INTS4Q96HW7 963 aaKnown RBP18.82■□□□□ 0.6
CIITA-206ENST00000571190 FUBP3Q96I24 572 aaKnown RBP eCLIP18.82■□□□□ 0.6
CIITA-206ENST00000571190 CRTAC1Q9NQ79 661 aa18.82■□□□□ 0.6
CIITA-206ENST00000571190 CCDC163A0A0D9SF12 145 aa18.81■□□□□ 0.6
CIITA-206ENST00000571190 C2orf78A6NCI8 922 aa18.81■□□□□ 0.6
CIITA-206ENST00000571190 KIAA0391O15091 583 aaKnown RBP18.81■□□□□ 0.6
CIITA-206ENST00000571190 RNF40O75150 1001 aa18.81■□□□□ 0.6
CIITA-206ENST00000571190 PCSK1P29120 753 aa18.81■□□□□ 0.6
CIITA-206ENST00000571190 GJA4P35212 333 aa18.81■□□□□ 0.6
CIITA-206ENST00000571190 MAGEA11P43364 429 aa18.81■□□□□ 0.6
CIITA-206ENST00000571190 USP4Q13107 963 aa18.81■□□□□ 0.6
CIITA-206ENST00000571190 MTF1Q14872 753 aa18.81■□□□□ 0.6
CIITA-206ENST00000571190 PDGFRLQ15198 375 aa18.81■□□□□ 0.6
CIITA-206ENST00000571190 CC2D1AQ6P1N0 951 aaPredicted RBP18.81■□□□□ 0.6
CIITA-206ENST00000571190 DPH6Q7L8W6 267 aa18.81■□□□□ 0.6
CIITA-206ENST00000571190 CCDC65Q8IXS2 484 aa18.81■□□□□ 0.6
CIITA-206ENST00000571190 ARL14EPQ8N8R7 260 aaPredicted RBP18.81■□□□□ 0.6
CIITA-206ENST00000571190 GAB3Q8WWW8 586 aa18.81■□□□□ 0.6
CIITA-206ENST00000571190 HPDLQ96IR7 371 aa18.81■□□□□ 0.6
CIITA-206ENST00000571190 ANKRD36BP1Q96IX9 119 aa18.81■□□□□ 0.6
CIITA-206ENST00000571190 CNTNAP3BQ96NU0 1288 aa18.81■□□□□ 0.6
CIITA-206ENST00000571190 CNTNAP3Q9BZ76 1288 aa18.81■□□□□ 0.6
CIITA-206ENST00000571190 ECT2Q9H8V3 914 aa18.81■□□□□ 0.6
CIITA-206ENST00000571190 TRPC7Q9HCX4 862 aa18.81■□□□□ 0.6
CIITA-206ENST00000571190 FOXD4L1Q9NU39 408 aa18.81■□□□□ 0.6
CIITA-206ENST00000571190 KBTBD4Q9NVX7 518 aa18.81■□□□□ 0.6
CIITA-206ENST00000571190 NME7Q9Y5B8 376 aa18.81■□□□□ 0.6
CIITA-206ENST00000571190 ZNF233A6NK53 670 aa18.8■□□□□ 0.6
CIITA-206ENST00000571190 PSMC1P62191 440 aaKnown RBP18.8■□□□□ 0.6
CIITA-206ENST00000571190 ZXDBP98169 803 aa18.8■□□□□ 0.6
CIITA-206ENST00000571190 EPM2AIP1Q7L775 607 aaPredicted RBP18.8■□□□□ 0.6
CIITA-206ENST00000571190 KBTBD6Q86V97 674 aa18.8■□□□□ 0.6
CIITA-206ENST00000571190 SCN4BQ8IWT1 228 aa18.8■□□□□ 0.6
CIITA-206ENST00000571190 OSCP1Q8WVF1 389 aa18.8■□□□□ 0.6
CIITA-206ENST00000571190 P2RY13Q9BPV8 354 aa18.8■□□□□ 0.6
CIITA-206ENST00000571190 SYT15Q9BQS2 421 aa18.8■□□□□ 0.6
CIITA-206ENST00000571190 TRIM9Q9C026 710 aa18.8■□□□□ 0.6
CIITA-206ENST00000571190 TNMDQ9H2S6 317 aa18.8■□□□□ 0.6
CIITA-206ENST00000571190 ZSCAN16Q9H4T2 348 aaPredicted RBP18.8■□□□□ 0.6
CIITA-206ENST00000571190 HSPBP1Q9NZL4 362 aa18.8■□□□□ 0.6
CIITA-206ENST00000571190 WNT6Q9Y6F9 365 aa18.8■□□□□ 0.6
CIITA-206ENST00000571190 AXIN1O15169 862 aa18.79■□□□□ 0.6
CIITA-206ENST00000571190 TGFB1I1O43294 461 aa18.79■□□□□ 0.6
CIITA-206ENST00000571190 STX6O43752 255 aa18.79■□□□□ 0.6
CIITA-206ENST00000571190 ATG13O75143 517 aa18.79■□□□□ 0.6
CIITA-206ENST00000571190 CST3P01034 146 aaPredicted RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms