RNA–Protein interactions for RNA: ENST00000570546.5

CIITA-204, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 5,342 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-204ENST00000570546 RARAP10276 462 aa15.99■□□□□ 0.15
CIITA-204ENST00000570546 NLRP11P59045 1033 aaKnown RBP15.99■□□□□ 0.15
CIITA-204ENST00000570546 SPATA20Q8TB22 786 aa15.99■□□□□ 0.15
CIITA-204ENST00000570546 FDFT1P37268 417 aa15.99■□□□□ 0.15
CIITA-204ENST00000570546 PBX1P40424 430 aa15.99■□□□□ 0.15
CIITA-204ENST00000570546 IFI35P80217 286 aaPredicted RBP15.99■□□□□ 0.15
CIITA-204ENST00000570546 OCA2Q04671 838 aa15.99■□□□□ 0.15
CIITA-204ENST00000570546 CBWD6Q4V339 395 aa15.99■□□□□ 0.15
CIITA-204ENST00000570546 CBWD3Q5JTY5 395 aa15.99■□□□□ 0.15
CIITA-204ENST00000570546 CBWD5Q5RIA9 395 aa15.99■□□□□ 0.15
CIITA-204ENST00000570546 ABRAQ8N0Z2 381 aa15.99■□□□□ 0.15
CIITA-204ENST00000570546 C2orf69Q8N8R5 385 aa15.99■□□□□ 0.15
CIITA-204ENST00000570546 TSPAN17Q96FV3 270 aa15.99■□□□□ 0.15
CIITA-204ENST00000570546 RMDN2Q96LZ7 410 aa15.99■□□□□ 0.15
CIITA-204ENST00000570546 DPP3Q9NY33 737 aa15.99■□□□□ 0.15
CIITA-204ENST00000570546 SYCE1LA8MT33 242 aa15.99■□□□□ 0.15
CIITA-204ENST00000570546 EML1O00423 815 aa15.99■□□□□ 0.15
CIITA-204ENST00000570546 ADCY3O60266 1144 aa15.99■□□□□ 0.15
CIITA-204ENST00000570546 GRIK1P39086 918 aa15.99■□□□□ 0.15
CIITA-204ENST00000570546 SOX10P56693 466 aa15.99■□□□□ 0.15
CIITA-204ENST00000570546 CACNB2Q08289 660 aaPredicted RBP15.99■□□□□ 0.15
CIITA-204ENST00000570546 CAPRIN1Q14444 709 aaKnown RBP15.99■□□□□ 0.15
CIITA-204ENST00000570546 SV2CQ496J9 727 aa15.99■□□□□ 0.15
CIITA-204ENST00000570546 GFAPP14136 432 aa15.98■□□□□ 0.15
CIITA-204ENST00000570546 INPP5AQ14642 412 aa15.98■□□□□ 0.15
CIITA-204ENST00000570546 SPDYCQ5MJ68 293 aa15.98■□□□□ 0.15
CIITA-204ENST00000570546 GRAMD4Q6IC98 578 aa15.98■□□□□ 0.15
CIITA-204ENST00000570546 TAS2R42Q7RTR8 314 aa15.98■□□□□ 0.15
CIITA-204ENST00000570546 ZNF669Q96BR6 464 aaPredicted RBP15.98■□□□□ 0.15
CIITA-204ENST00000570546 SPON2Q9BUD6 331 aa15.98■□□□□ 0.15
CIITA-204ENST00000570546 TSR3Q9UJK0 312 aaKnown RBP15.98■□□□□ 0.15
CIITA-204ENST00000570546 LOC100653049A0A140TA62 436 aa15.98■□□□□ 0.15
CIITA-204ENST00000570546 KRT34O76011 436 aa15.98■□□□□ 0.15
CIITA-204ENST00000570546 SLC25A27O95847 323 aa15.98■□□□□ 0.15
CIITA-204ENST00000570546 MYBL2P10244 700 aa15.98■□□□□ 0.15
CIITA-204ENST00000570546 GNL1P36915 607 aaPredicted RBP15.98■□□□□ 0.15
CIITA-204ENST00000570546 COPAP53621 1224 aa15.98■□□□□ 0.15
CIITA-204ENST00000570546 DENND5BQ6ZUT9 1274 aa15.98■□□□□ 0.15
CIITA-204ENST00000570546 PACS2Q86VP3 889 aa15.98■□□□□ 0.15
CIITA-204ENST00000570546 TMEM139Q8IV31 216 aa15.98■□□□□ 0.15
CIITA-204ENST00000570546 EIF1ADQ8N9N8 165 aaKnown RBP15.98■□□□□ 0.15
CIITA-204ENST00000570546 SYTL5Q8TDW5 730 aaPredicted RBP15.98■□□□□ 0.15
CIITA-204ENST00000570546 EGFL8Q99944 293 aa15.98■□□□□ 0.15
CIITA-204ENST00000570546 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.98■□□□□ 0.15
CIITA-204ENST00000570546 DLGAP2Q9P1A6 1054 aa15.98■□□□□ 0.15
CIITA-204ENST00000570546 NPTXRO95502 500 aa15.98■□□□□ 0.15
CIITA-204ENST00000570546 RARBP10826 455 aa15.98■□□□□ 0.15
CIITA-204ENST00000570546 MPZL3Q6UWV2 235 aa15.98■□□□□ 0.15
CIITA-204ENST00000570546 SPATA2LQ8IUW3 424 aaPredicted RBP15.98■□□□□ 0.15
CIITA-204ENST00000570546 RAP1GAPP47736 663 aa15.98■□□□□ 0.15
CIITA-204ENST00000570546 GMPSP49915 693 aaPredicted RBP15.98■□□□□ 0.15
CIITA-204ENST00000570546 IRX1P78414 480 aaPredicted RBP15.98■□□□□ 0.15
CIITA-204ENST00000570546 PDK2Q15119 407 aa15.98■□□□□ 0.15
CIITA-204ENST00000570546 SLC30A9Q6PML9 568 aa15.98■□□□□ 0.15
CIITA-204ENST00000570546 MTDHQ86UE4 582 aaKnown RBP15.98■□□□□ 0.15
CIITA-204ENST00000570546 WDR49Q8IV35 697 aa15.98■□□□□ 0.15
CIITA-204ENST00000570546 MSL3Q8N5Y2 521 aaKnown RBP15.98■□□□□ 0.15
CIITA-204ENST00000570546 ATXN2LQ8WWM7 1075 aaKnown RBP15.98■□□□□ 0.15
CIITA-204ENST00000570546 IFT172Q9UG01 1749 aa15.98■□□□□ 0.15
CIITA-204ENST00000570546 WNT7AO00755 349 aa15.98■□□□□ 0.15
CIITA-204ENST00000570546 TRAPPC3O43617 180 aa15.98■□□□□ 0.15
CIITA-204ENST00000570546 VDRP11473 427 aa15.98■□□□□ 0.15
CIITA-204ENST00000570546 PRKCIP41743 596 aa15.98■□□□□ 0.15
CIITA-204ENST00000570546 RARRES1P49788 294 aa15.98■□□□□ 0.15
CIITA-204ENST00000570546 ATXN3P54252 364 aaPredicted RBP15.98■□□□□ 0.15
CIITA-204ENST00000570546 C1QBPQ07021 282 aaKnown RBP15.98■□□□□ 0.15
CIITA-204ENST00000570546 CD302Q8IX05 232 aa15.98■□□□□ 0.15
CIITA-204ENST00000570546 BAP1Q92560 729 aa15.98■□□□□ 0.15
CIITA-204ENST00000570546 DACT3Q96B18 629 aaPredicted RBP15.98■□□□□ 0.15
CIITA-204ENST00000570546 RMDN1Q96DB5 314 aa15.98■□□□□ 0.15
CIITA-204ENST00000570546 ACADSP16219 412 aa15.97■□□□□ 0.15
CIITA-204ENST00000570546 CASP5P51878 434 aa15.97■□□□□ 0.15
CIITA-204ENST00000570546 AMPD2Q01433 879 aa15.97■□□□□ 0.15
CIITA-204ENST00000570546 PGM2Q96G03 612 aa15.97■□□□□ 0.15
CIITA-204ENST00000570546 GGA3Q9NZ52 723 aa15.97■□□□□ 0.15
CIITA-204ENST00000570546 HACL1Q9UJ83 578 aa15.97■□□□□ 0.15
CIITA-204ENST00000570546 SRP72O76094 671 aaKnown RBP15.97■□□□□ 0.15
CIITA-204ENST00000570546 PTGER2P43116 358 aa15.97■□□□□ 0.15
CIITA-204ENST00000570546 BIRC2Q13490 618 aa15.97■□□□□ 0.15
CIITA-204ENST00000570546 PGM5Q15124 567 aa15.97■□□□□ 0.15
CIITA-204ENST00000570546 ANO4Q32M45 955 aa15.97■□□□□ 0.15
CIITA-204ENST00000570546 ELMO3Q96BJ8 720 aa15.97■□□□□ 0.15
CIITA-204ENST00000570546 FAM163AQ96GL9 167 aaPredicted RBP15.97■□□□□ 0.15
CIITA-204ENST00000570546 TMEM120AQ9BXJ8 343 aa15.97■□□□□ 0.15
CIITA-204ENST00000570546 GANQ9H2C0 597 aa15.97■□□□□ 0.15
CIITA-204ENST00000570546 CISHQ9NSE2 258 aa15.97■□□□□ 0.15
CIITA-204ENST00000570546 ZBTB39O15060 712 aa15.97■□□□□ 0.15
CIITA-204ENST00000570546 TM9SF1O15321 606 aa15.97■□□□□ 0.15
CIITA-204ENST00000570546 DNAJC6O75061 913 aa15.97■□□□□ 0.15
CIITA-204ENST00000570546 GLRA3O75311 464 aa15.97■□□□□ 0.15
CIITA-204ENST00000570546 DGKIO75912 1065 aa15.97■□□□□ 0.15
CIITA-204ENST00000570546 MYL6P60660 151 aa15.97■□□□□ 0.15
CIITA-204ENST00000570546 NOP9Q86U38 636 aaKnown RBP15.97■□□□□ 0.15
CIITA-204ENST00000570546 HAS1Q92839 578 aa15.97■□□□□ 0.15
CIITA-204ENST00000570546 EME1Q96AY2 570 aa15.97■□□□□ 0.15
CIITA-204ENST00000570546 KCNMB3Q9NPA1 279 aa15.97■□□□□ 0.15
CIITA-204ENST00000570546 NINJ2Q9NZG7 142 aa15.97■□□□□ 0.15
CIITA-204ENST00000570546 SLC39A10Q9ULF5 831 aa15.97■□□□□ 0.15
CIITA-204ENST00000570546 MAP3K6O95382 1288 aa15.97■□□□□ 0.15
CIITA-204ENST00000570546 SNX19Q92543 992 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms