RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 SEL1LQ9UBV2 794 aa9.25□□□□□ -0.93
CTDNEP1-203ENST00000570385 SIX4Q9UIU6 781 aa9.25□□□□□ -0.93
CTDNEP1-203ENST00000570385 PCDHB13Q9Y5F0 798 aa9.25□□□□□ -0.93
CTDNEP1-203ENST00000570385 GON4LQ3T8J9 2241 aa9.25□□□□□ -0.93
CTDNEP1-203ENST00000570385 MAP1BP46821 2468 aaKnown RBP9.25□□□□□ -0.93
CTDNEP1-203ENST00000570385 DENND4CQ5VZ89 1909 aa9.25□□□□□ -0.93
CTDNEP1-203ENST00000570385 CHD8Q9HCK8 2581 aa9.24□□□□□ -0.93
CTDNEP1-203ENST00000570385 RNF40O75150 1001 aa9.24□□□□□ -0.93
CTDNEP1-203ENST00000570385 CKMP06732 381 aa9.24□□□□□ -0.93
CTDNEP1-203ENST00000570385 PDGFRBP09619 1106 aa9.24□□□□□ -0.93
CTDNEP1-203ENST00000570385 TMEM191BP0C7N4 346 aa9.24□□□□□ -0.93
CTDNEP1-203ENST00000570385 CSH1P0DML2 217 aa9.24□□□□□ -0.93
CTDNEP1-203ENST00000570385 CSH2P0DML3 217 aa9.24□□□□□ -0.93
CTDNEP1-203ENST00000570385 PDCP20941 246 aa9.24□□□□□ -0.93
CTDNEP1-203ENST00000570385 SDHBP21912 280 aa9.24□□□□□ -0.93
CTDNEP1-203ENST00000570385 GARTP22102 1010 aa9.24□□□□□ -0.93
CTDNEP1-203ENST00000570385 LMO2P25791 158 aa9.24□□□□□ -0.93
CTDNEP1-203ENST00000570385 WEE1P30291 646 aa9.24□□□□□ -0.93
CTDNEP1-203ENST00000570385 GALK1P51570 392 aa9.24□□□□□ -0.93
CTDNEP1-203ENST00000570385 PSMC1P62191 440 aaKnown RBP9.24□□□□□ -0.93
CTDNEP1-203ENST00000570385 RPL10AP62906 217 aaKnown RBP9.24□□□□□ -0.93
CTDNEP1-203ENST00000570385 RBP5P82980 135 aa9.24□□□□□ -0.93
CTDNEP1-203ENST00000570385 MYL7Q01449 175 aa9.24□□□□□ -0.93
CTDNEP1-203ENST00000570385 SF3A2Q15428 464 aaKnown RBP9.24□□□□□ -0.93
CTDNEP1-203ENST00000570385 NFE2Q16621 373 aaPredicted RBP9.24□□□□□ -0.93
CTDNEP1-203ENST00000570385 SOWAHAQ2M3V2 549 aa9.24□□□□□ -0.93
CTDNEP1-203ENST00000570385 TMEM196Q5HYL7 178 aa9.24□□□□□ -0.93
CTDNEP1-203ENST00000570385 CCDC73Q6ZRK6 1079 aa9.24□□□□□ -0.93
CTDNEP1-203ENST00000570385 PRR23CQ6ZRP0 262 aa9.24□□□□□ -0.93
CTDNEP1-203ENST00000570385 NT5DC4Q86YG4 428 aa9.24□□□□□ -0.93
CTDNEP1-203ENST00000570385 CBWD2Q8IUF1 395 aa9.24□□□□□ -0.93
CTDNEP1-203ENST00000570385 SPATA2LQ8IUW3 424 aaPredicted RBP9.24□□□□□ -0.93
CTDNEP1-203ENST00000570385 ADGRF2Q8IZF7 708 aa9.24□□□□□ -0.93
CTDNEP1-203ENST00000570385 CXorf38Q8TB03 319 aa9.24□□□□□ -0.93
CTDNEP1-203ENST00000570385 HHIPQ96QV1 700 aa9.24□□□□□ -0.93
CTDNEP1-203ENST00000570385 ACBD6Q9BR61 282 aa9.24□□□□□ -0.93
CTDNEP1-203ENST00000570385 RTKNQ9BST9 563 aa9.24□□□□□ -0.93
CTDNEP1-203ENST00000570385 ARRDC1-AS1Q9H2J1 176 aa9.24□□□□□ -0.93
CTDNEP1-203ENST00000570385 SLC8A2Q9UPR5 921 aa9.24□□□□□ -0.93
CTDNEP1-203ENST00000570385 WNT6Q9Y6F9 365 aa9.24□□□□□ -0.93
CTDNEP1-203ENST00000570385 PTPRJQ12913 1337 aa9.24□□□□□ -0.93
CTDNEP1-203ENST00000570385 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.23□□□□□ -0.93
CTDNEP1-203ENST00000570385 C2orf78A6NCI8 922 aa9.23□□□□□ -0.93
CTDNEP1-203ENST00000570385 ANTXRLA6NF34 631 aa9.23□□□□□ -0.93
CTDNEP1-203ENST00000570385 TRDMT1O14717 391 aaKnown RBP9.23□□□□□ -0.93
CTDNEP1-203ENST00000570385 SCAMP3O14828 347 aaKnown RBP9.23□□□□□ -0.93
CTDNEP1-203ENST00000570385 RPP40O75818 363 aaKnown RBP9.23□□□□□ -0.93
CTDNEP1-203ENST00000570385 NOL4O94818 638 aa9.23□□□□□ -0.93
CTDNEP1-203ENST00000570385 PAPSS2O95340 614 aaPredicted RBP9.23□□□□□ -0.93
CTDNEP1-203ENST00000570385 LDHAP00338 332 aaKnown RBP9.23□□□□□ -0.93
CTDNEP1-203ENST00000570385 CCDC192P0DO97 292 aa9.23□□□□□ -0.93
CTDNEP1-203ENST00000570385 BDNFP23560 247 aa9.23□□□□□ -0.93
CTDNEP1-203ENST00000570385 CNR2P34972 360 aa9.23□□□□□ -0.93
CTDNEP1-203ENST00000570385 POU5F1Q01860 360 aaKnown RBP9.23□□□□□ -0.93
CTDNEP1-203ENST00000570385 PSMD2Q13200 908 aa9.23□□□□□ -0.93
CTDNEP1-203ENST00000570385 MTF1Q14872 753 aa9.23□□□□□ -0.93
CTDNEP1-203ENST00000570385 SLC39A14Q15043 492 aa9.23□□□□□ -0.93
CTDNEP1-203ENST00000570385 CSRP2Q16527 193 aa9.23□□□□□ -0.93
CTDNEP1-203ENST00000570385 PPM1JQ5JR12 505 aa9.23□□□□□ -0.93
CTDNEP1-203ENST00000570385 FOXD4L5Q5VV16 416 aaPredicted RBP9.23□□□□□ -0.93
CTDNEP1-203ENST00000570385 KBTBD6Q86V97 674 aa9.23□□□□□ -0.93
CTDNEP1-203ENST00000570385 WDR5BQ86VZ2 330 aa9.23□□□□□ -0.93
CTDNEP1-203ENST00000570385 GPD1LQ8N335 351 aa9.23□□□□□ -0.93
CTDNEP1-203ENST00000570385 SYNPOQ8N3V7 929 aa9.23□□□□□ -0.93
CTDNEP1-203ENST00000570385 LRRC52Q8N7C0 313 aa9.23□□□□□ -0.93
CTDNEP1-203ENST00000570385 ARL14EPQ8N8R7 260 aaPredicted RBP9.23□□□□□ -0.93
CTDNEP1-203ENST00000570385 RDH13Q8NBN7 331 aa9.23□□□□□ -0.93
CTDNEP1-203ENST00000570385 NETO1Q8TDF5 533 aa9.23□□□□□ -0.93
CTDNEP1-203ENST00000570385 FOXD4L4Q8WXT5 416 aaPredicted RBP9.23□□□□□ -0.93
CTDNEP1-203ENST00000570385 HPDLQ96IR7 371 aa9.23□□□□□ -0.93
CTDNEP1-203ENST00000570385 ANKRD36BP1Q96IX9 119 aa9.23□□□□□ -0.93
CTDNEP1-203ENST00000570385 PKMYT1Q99640 499 aa9.23□□□□□ -0.93
CTDNEP1-203ENST00000570385 P2RY13Q9BPV8 354 aa9.23□□□□□ -0.93
CTDNEP1-203ENST00000570385 SYT15Q9BQS2 421 aa9.23□□□□□ -0.93
CTDNEP1-203ENST00000570385 LINC00597Q9H2U6 94 aa9.23□□□□□ -0.93
CTDNEP1-203ENST00000570385 SMOC1Q9H4F8 434 aa9.23□□□□□ -0.93
CTDNEP1-203ENST00000570385 ECT2Q9H8V3 914 aa9.23□□□□□ -0.93
CTDNEP1-203ENST00000570385 OLFML3Q9NRN5 406 aa9.23□□□□□ -0.93
CTDNEP1-203ENST00000570385 RXFP3Q9NSD7 469 aa9.23□□□□□ -0.93
CTDNEP1-203ENST00000570385 INTS13Q9NVM9 706 aa9.23□□□□□ -0.93
CTDNEP1-203ENST00000570385 DUS2Q9NX74 493 aaKnown RBP9.23□□□□□ -0.93
CTDNEP1-203ENST00000570385 GDAP2Q9NXN4 497 aa9.23□□□□□ -0.93
CTDNEP1-203ENST00000570385 TFIP11Q9UBB9 837 aaKnown RBP9.23□□□□□ -0.93
CTDNEP1-203ENST00000570385 ITGA11Q9UKX5 1188 aa9.23□□□□□ -0.93
CTDNEP1-203ENST00000570385 MTMR6Q9Y217 621 aa9.23□□□□□ -0.93
CTDNEP1-203ENST00000570385 R3HCC1Q9Y3T6 440 aaKnown RBP9.23□□□□□ -0.93
CTDNEP1-203ENST00000570385 ABCA7Q8IZY2 2146 aa9.23□□□□□ -0.93
CTDNEP1-203ENST00000570385 OBSL1O75147 1896 aa9.23□□□□□ -0.93
CTDNEP1-203ENST00000570385 TRAV19A0A0A6YYK7 116 aa9.22□□□□□ -0.93
CTDNEP1-203ENST00000570385 FRMD3A2A2Y4 597 aa9.22□□□□□ -0.93
CTDNEP1-203ENST00000570385 ZNF233A6NK53 670 aa9.22□□□□□ -0.93
CTDNEP1-203ENST00000570385 GABRDO14764 452 aa9.22□□□□□ -0.93
CTDNEP1-203ENST00000570385 SLC30A4O14863 429 aa9.22□□□□□ -0.93
CTDNEP1-203ENST00000570385 DCLK1O15075 740 aa9.22□□□□□ -0.93
CTDNEP1-203ENST00000570385 TNNC2P02585 160 aa9.22□□□□□ -0.93
CTDNEP1-203ENST00000570385 DDX6P26196 483 aaKnown RBP eCLIP9.22□□□□□ -0.93
CTDNEP1-203ENST00000570385 PCSK1P29120 753 aa9.22□□□□□ -0.93
CTDNEP1-203ENST00000570385 GJA4P35212 333 aa9.22□□□□□ -0.93
CTDNEP1-203ENST00000570385 HOXD13P35453 343 aa9.22□□□□□ -0.93
CTDNEP1-203ENST00000570385 GRIK1P39086 918 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms