RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 DCP2Q8IU60 420 aaKnown RBP3.63□□□□□ -1.83
CNOT1-221ENST00000569924 GLB1L2Q8IW92 636 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 SHISA5Q8N114 240 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 FANCBQ8NB91 859 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 SIMC1Q8NDZ2 872 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 GPR156Q8NFN8 814 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 CYP2W1Q8TAV3 490 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 CALML6Q8TD86 181 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 NUP133Q8WUM0 1156 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 DNAAF4Q8WXU2 420 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 HOXB13Q92826 284 aaPredicted RBP3.63□□□□□ -1.83
CNOT1-221ENST00000569924 IRF7Q92985 503 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 IQCDQ96DY2 449 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 CLMNQ96JQ2 1002 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 MEGF10Q96KG7 1140 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 HIST1H2AHQ96KK5 128 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 PRMT6Q96LA8 375 aaPredicted RBP3.63□□□□□ -1.83
CNOT1-221ENST00000569924 MRGPRX4Q96LA9 322 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 MRGPRX1Q96LB2 322 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 HIST1H2AJQ99878 128 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 VRK1Q99986 396 aaPredicted RBP3.63□□□□□ -1.83
CNOT1-221ENST00000569924 NOL10Q9BSC4 688 aaKnown RBP3.63□□□□□ -1.83
CNOT1-221ENST00000569924 CNPPD1Q9BV87 410 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 AP5M1Q9H0R1 490 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 RSPH9Q9H1X1 276 aaPredicted RBP3.63□□□□□ -1.83
CNOT1-221ENST00000569924 WDCPQ9H6R7 721 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 PLEKHA5Q9HAU0 1116 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 ATP13A1Q9HD20 1204 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 SARS2Q9NP81 518 aaKnown RBP3.63□□□□□ -1.83
CNOT1-221ENST00000569924 RIC8AQ9NPQ8 531 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 CNNM1Q9NRU3 951 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 TDP1Q9NUW8 608 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 CALCOCO1Q9P1Z2 691 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 COL20A1Q9P218 1284 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 IMPACTQ9P2X3 320 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 CPA4Q9UI42 421 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 PALD1Q9ULE6 856 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 MAN2B2Q9Y2E5 1009 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 SIK3Q9Y2K2 1263 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 U3KQE9 123 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 BAHCC1Q9P281 2608 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 A0A1B0GUL6 1792 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 HTTP42858 3142 aa3.63□□□□□ -1.83
CNOT1-221ENST00000569924 TRIOBPQ9H2D6 2365 aa3.62□□□□□ -1.83
CNOT1-221ENST00000569924 OTOFQ9HC10 1997 aa3.62□□□□□ -1.83
CNOT1-221ENST00000569924 CLRN2A0PK11 232 aa3.62□□□□□ -1.83
CNOT1-221ENST00000569924 TISP43B9A030 160 aa3.62□□□□□ -1.83
CNOT1-221ENST00000569924 B9A039 149 aa3.62□□□□□ -1.83
CNOT1-221ENST00000569924 TRIM38O00635 465 aa3.62□□□□□ -1.83
CNOT1-221ENST00000569924 THAP12O43422 761 aa3.62□□□□□ -1.83
CNOT1-221ENST00000569924 TMCC2O75069 709 aa3.62□□□□□ -1.83
CNOT1-221ENST00000569924 TAF5LO75529 589 aa3.62□□□□□ -1.83
CNOT1-221ENST00000569924 GFPT2O94808 682 aa3.62□□□□□ -1.83
CNOT1-221ENST00000569924 SEC24DO94855 1032 aaPredicted RBP3.62□□□□□ -1.83
CNOT1-221ENST00000569924 ENDOD1O94919 500 aa3.62□□□□□ -1.83
CNOT1-221ENST00000569924 ANXA2P07355 339 aaKnown RBP3.62□□□□□ -1.83
CNOT1-221ENST00000569924 FTH1P19P0C7X4 201 aa3.62□□□□□ -1.83
CNOT1-221ENST00000569924 MSL3P1P0C860 447 aa3.62□□□□□ -1.83
CNOT1-221ENST00000569924 GLI4P10075 376 aa3.62□□□□□ -1.83
CNOT1-221ENST00000569924 PTGS1P23219 599 aa3.62□□□□□ -1.83
CNOT1-221ENST00000569924 RPS6KB1P23443 525 aa3.62□□□□□ -1.83
CNOT1-221ENST00000569924 TACR1P25103 407 aa3.62□□□□□ -1.83
CNOT1-221ENST00000569924 MC4RP32245 332 aa3.62□□□□□ -1.83
CNOT1-221ENST00000569924 TUBP50607 506 aa3.62□□□□□ -1.83
CNOT1-221ENST00000569924 ARFIP2P53365 341 aa3.62□□□□□ -1.83
CNOT1-221ENST00000569924 PRMT2P55345 433 aa3.62□□□□□ -1.83
CNOT1-221ENST00000569924 FOXO4P98177 505 aa3.62□□□□□ -1.83
CNOT1-221ENST00000569924 MVKQ03426 396 aa3.62□□□□□ -1.83
CNOT1-221ENST00000569924 TLE2Q04725 743 aa3.62□□□□□ -1.83
CNOT1-221ENST00000569924 TARDBPQ13148 414 aaKnown RBP eCLIP3.62□□□□□ -1.83
CNOT1-221ENST00000569924 SNAPC2Q13487 334 aa3.62□□□□□ -1.83
CNOT1-221ENST00000569924 ADGRE1Q14246 886 aa3.62□□□□□ -1.83
CNOT1-221ENST00000569924 FAM110CQ1W6H9 321 aa3.62□□□□□ -1.83
CNOT1-221ENST00000569924 ALDH1L2Q3SY69 923 aa3.62□□□□□ -1.83
CNOT1-221ENST00000569924 C3orf38Q5JPI3 329 aa3.62□□□□□ -1.83
CNOT1-221ENST00000569924 ITPRIPL1Q6GPH6 555 aa3.62□□□□□ -1.83
CNOT1-221ENST00000569924 TANGO2Q6ICL3 276 aa3.62□□□□□ -1.83
CNOT1-221ENST00000569924 NEK10Q6ZWH5 1172 aa3.62□□□□□ -1.83
CNOT1-221ENST00000569924 FASTKD5Q7L8L6 764 aaKnown RBP3.62□□□□□ -1.83
CNOT1-221ENST00000569924 NBPF11Q86T75 865 aa3.62□□□□□ -1.83
CNOT1-221ENST00000569924 MOGAT3Q86VF5 341 aa3.62□□□□□ -1.83
CNOT1-221ENST00000569924 LRRTM4Q86VH4 590 aa3.62□□□□□ -1.83
CNOT1-221ENST00000569924 FAM181AQ8N9Y4 354 aa3.62□□□□□ -1.83
CNOT1-221ENST00000569924 NETO2Q8NC67 525 aa3.62□□□□□ -1.83
CNOT1-221ENST00000569924 ARRDC4Q8NCT1 418 aa3.62□□□□□ -1.83
CNOT1-221ENST00000569924 TDRD7Q8NHU6 1098 aaKnown RBP3.62□□□□□ -1.83
CNOT1-221ENST00000569924 FAM71BQ8TC56 605 aa3.62□□□□□ -1.83
CNOT1-221ENST00000569924 STT3BQ8TCJ2 826 aa3.62□□□□□ -1.83
CNOT1-221ENST00000569924 SPPL3Q8TCT6 385 aa3.62□□□□□ -1.83
CNOT1-221ENST00000569924 CD99L2Q8TCZ2 262 aa3.62□□□□□ -1.83
CNOT1-221ENST00000569924 BRIX1Q8TDN6 353 aaKnown RBP3.62□□□□□ -1.83
CNOT1-221ENST00000569924 KBTBD7Q8WVZ9 684 aa3.62□□□□□ -1.83
CNOT1-221ENST00000569924 OPTNQ96CV9 577 aa3.62□□□□□ -1.83
CNOT1-221ENST00000569924 EID2BQ96D98 161 aa3.62□□□□□ -1.83
CNOT1-221ENST00000569924 RSRC1Q96IZ7 334 aaKnown RBP3.62□□□□□ -1.83
CNOT1-221ENST00000569924 ZNF333Q96JL9 665 aa3.62□□□□□ -1.83
CNOT1-221ENST00000569924 MAELQ96JY0 434 aaKnown RBP3.62□□□□□ -1.83
CNOT1-221ENST00000569924 TEPSINQ96N21 525 aa3.62□□□□□ -1.83
CNOT1-221ENST00000569924 TTC14Q96N46 770 aa3.62□□□□□ -1.83
CNOT1-221ENST00000569924 FDXACB1Q9BRP7 624 aaPredicted RBP3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms