RNA–Protein interactions for RNA: ENST00000569615.2

UTP4-215, Transcript of UTP4, small subunit processome component, human

TSL 3

Gene UTP4, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UTP4-215	ENST00000569615	CYP2F1	P24903	491 aa		13.6	□□□□□ -0.23
UTP4-215	ENST00000569615	VIPR2	P41587	438 aa		13.6	□□□□□ -0.23
UTP4-215	ENST00000569615	MRE11	P49959	708 aa		13.6	□□□□□ -0.23
UTP4-215	ENST00000569615	NCOA4	Q13772	614 aa		13.6	□□□□□ -0.23
UTP4-215	ENST00000569615	GRM2	Q14416	872 aa		13.6	□□□□□ -0.23
UTP4-215	ENST00000569615	SGSM1	Q2NKQ1	1148 aa		13.6	□□□□□ -0.23
UTP4-215	ENST00000569615	VIT	Q6UXI7	678 aa		13.6	□□□□□ -0.23
UTP4-215	ENST00000569615	CELF5	Q8N6W0	485 aa	Known RBP	13.6	□□□□□ -0.23
UTP4-215	ENST00000569615	CCDC150	Q8NCX0	1101 aa		13.6	□□□□□ -0.23
UTP4-215	ENST00000569615	MYCBPAP	Q8TBZ2	947 aa		13.6	□□□□□ -0.23
UTP4-215	ENST00000569615	KBTBD7	Q8WVZ9	684 aa		13.6	□□□□□ -0.23
UTP4-215	ENST00000569615	TNIP3	Q96KP6	325 aa		13.6	□□□□□ -0.23
UTP4-215	ENST00000569615	GSDMA	Q96QA5	445 aa		13.6	□□□□□ -0.23
UTP4-215	ENST00000569615	PLA2G2F	Q9BZM2	168 aa		13.6	□□□□□ -0.23
UTP4-215	ENST00000569615	KIF9	Q9HAQ2	790 aa		13.6	□□□□□ -0.23
UTP4-215	ENST00000569615	ZNF334	Q9HCZ1	680 aa	Predicted RBP	13.6	□□□□□ -0.23
UTP4-215	ENST00000569615	LTB4R2	Q9NPC1	389 aa		13.6	□□□□□ -0.23
UTP4-215	ENST00000569615	TMLHE	Q9NVH6	421 aa		13.6	□□□□□ -0.23
UTP4-215	ENST00000569615	NXF1	Q9UBU9	619 aa	Known RBP	13.6	□□□□□ -0.23
UTP4-215	ENST00000569615	MAGED2	Q9UNF1	606 aa	Predicted RBP	13.6	□□□□□ -0.23
UTP4-215	ENST00000569615	ATP8B3	O60423	1300 aa		13.6	□□□□□ -0.23
UTP4-215	ENST00000569615	MYBPHL	A2RUH7	354 aa		13.59	□□□□□ -0.23
UTP4-215	ENST00000569615	FAM170B	A6NMN3	283 aa		13.59	□□□□□ -0.23
UTP4-215	ENST00000569615	LRRIQ3	A6PVS8	624 aa	Predicted RBP	13.59	□□□□□ -0.23
UTP4-215	ENST00000569615		A8MXQ7	604 aa		13.59	□□□□□ -0.23
UTP4-215	ENST00000569615	PDGFRB	P09619	1106 aa		13.59	□□□□□ -0.23
UTP4-215	ENST00000569615	PSMC2	P35998	433 aa	Known RBP	13.59	□□□□□ -0.23
UTP4-215	ENST00000569615	GRIK1	P39086	918 aa		13.59	□□□□□ -0.23
UTP4-215	ENST00000569615	NLRP12	P59046	1061 aa		13.59	□□□□□ -0.23
UTP4-215	ENST00000569615	MYL6	P60660	151 aa		13.59	□□□□□ -0.23
UTP4-215	ENST00000569615	CYP27A1	Q02318	531 aa		13.59	□□□□□ -0.23
UTP4-215	ENST00000569615	FAM160A1	Q05DH4	1040 aa		13.59	□□□□□ -0.23
UTP4-215	ENST00000569615	FCHO2	Q0JRZ9	810 aa		13.59	□□□□□ -0.23
UTP4-215	ENST00000569615	ANGPT1	Q15389	498 aa		13.59	□□□□□ -0.23
UTP4-215	ENST00000569615	ZC3H14	Q6PJT7	736 aa	Known RBP	13.59	□□□□□ -0.23
UTP4-215	ENST00000569615	ALYREF	Q86V81	257 aa	Known RBP	13.59	□□□□□ -0.23
UTP4-215	ENST00000569615	OSTM1	Q86WC4	334 aa		13.59	□□□□□ -0.23
UTP4-215	ENST00000569615	SCN4B	Q8IWT1	228 aa		13.59	□□□□□ -0.23
UTP4-215	ENST00000569615	CMTM8	Q8IZV2	173 aa		13.59	□□□□□ -0.23
UTP4-215	ENST00000569615	BPIFB1	Q8TDL5	484 aa		13.59	□□□□□ -0.23
UTP4-215	ENST00000569615	EXOC4	Q96A65	974 aa		13.59	□□□□□ -0.23
UTP4-215	ENST00000569615	CHAMP1	Q96JM3	812 aa		13.59	□□□□□ -0.23
UTP4-215	ENST00000569615	FAM84A	Q96KN4	292 aa		13.59	□□□□□ -0.23
UTP4-215	ENST00000569615	SPATA17	Q96L03	361 aa		13.59	□□□□□ -0.23
UTP4-215	ENST00000569615	MYRFL	Q96LU7	910 aa		13.59	□□□□□ -0.23
UTP4-215	ENST00000569615	TIGD1	Q96MW7	591 aa		13.59	□□□□□ -0.23
UTP4-215	ENST00000569615	PKMYT1	Q99640	499 aa		13.59	□□□□□ -0.23
UTP4-215	ENST00000569615	TSG101	Q99816	390 aa		13.59	□□□□□ -0.23
UTP4-215	ENST00000569615	IER2	Q9BTL4	223 aa		13.59	□□□□□ -0.23
UTP4-215	ENST00000569615	ELOVL4	Q9GZR5	314 aa		13.59	□□□□□ -0.23
UTP4-215	ENST00000569615	GOLPH3L	Q9H4A5	285 aa		13.59	□□□□□ -0.23
UTP4-215	ENST00000569615	C8orf33	Q9H7E9	229 aa	Predicted RBP	13.59	□□□□□ -0.23
UTP4-215	ENST00000569615	IL21	Q9HBE4	155 aa		13.59	□□□□□ -0.23
UTP4-215	ENST00000569615	HEBP1	Q9NRV9	189 aa		13.59	□□□□□ -0.23
UTP4-215	ENST00000569615	STX10	O60499	249 aa		13.58	□□□□□ -0.24
UTP4-215	ENST00000569615	NOL4	O94818	638 aa		13.58	□□□□□ -0.24
UTP4-215	ENST00000569615	C4BPA	P04003	597 aa	Known RBP	13.58	□□□□□ -0.24
UTP4-215	ENST00000569615	DCN	P07585	359 aa	Known RBP	13.58	□□□□□ -0.24
UTP4-215	ENST00000569615	PRR29	P0C7W0	189 aa		13.58	□□□□□ -0.24
UTP4-215	ENST00000569615	HMGA1	P17096	107 aa	Known RBP	13.58	□□□□□ -0.24
UTP4-215	ENST00000569615	PFKL	P17858	780 aa		13.58	□□□□□ -0.24
UTP4-215	ENST00000569615	LMO2	P25791	158 aa		13.58	□□□□□ -0.24
UTP4-215	ENST00000569615	PPP1R2	P41236	205 aa		13.58	□□□□□ -0.24
UTP4-215	ENST00000569615	RPS9	P46781	194 aa	Known RBP	13.58	□□□□□ -0.24
UTP4-215	ENST00000569615	PPP3CC	P48454	512 aa		13.58	□□□□□ -0.24
UTP4-215	ENST00000569615	CASP4	P49662	377 aa		13.58	□□□□□ -0.24
UTP4-215	ENST00000569615	VAMP7	P51809	220 aa		13.58	□□□□□ -0.24
UTP4-215	ENST00000569615	KPNA1	P52294	538 aa	Predicted RBP	13.58	□□□□□ -0.24
UTP4-215	ENST00000569615	PSMC1	P62191	440 aa	Known RBP	13.58	□□□□□ -0.24
UTP4-215	ENST00000569615	CYP4F8	P98187	520 aa		13.58	□□□□□ -0.24
UTP4-215	ENST00000569615	AMPD2	Q01433	879 aa		13.58	□□□□□ -0.24
UTP4-215	ENST00000569615	ADAM9	Q13443	819 aa		13.58	□□□□□ -0.24
UTP4-215	ENST00000569615	STIM1	Q13586	685 aa		13.58	□□□□□ -0.24
UTP4-215	ENST00000569615	PPP2R5D	Q14738	602 aa		13.58	□□□□□ -0.24
UTP4-215	ENST00000569615	DDR2	Q16832	855 aa		13.58	□□□□□ -0.24
UTP4-215	ENST00000569615	EDRF1	Q3B7T1	1238 aa		13.58	□□□□□ -0.24
UTP4-215	ENST00000569615	ZACN	Q401N2	412 aa		13.58	□□□□□ -0.24
UTP4-215	ENST00000569615	TDRD10	Q5VZ19	366 aa	Known RBP	13.58	□□□□□ -0.24
UTP4-215	ENST00000569615	CC2D1A	Q6P1N0	951 aa	Predicted RBP	13.58	□□□□□ -0.24
UTP4-215	ENST00000569615	C1orf210	Q8IVY1	113 aa		13.58	□□□□□ -0.24
UTP4-215	ENST00000569615	FAM186B	Q8IYM0	893 aa		13.58	□□□□□ -0.24
UTP4-215	ENST00000569615	FMR1NB	Q8N0W7	255 aa	Predicted RBP	13.58	□□□□□ -0.24
UTP4-215	ENST00000569615	ZNF516	Q92618	1163 aa		13.58	□□□□□ -0.24
UTP4-215	ENST00000569615	SMARCE1	Q969G3	411 aa		13.58	□□□□□ -0.24
UTP4-215	ENST00000569615	MYLPF	Q96A32	169 aa		13.58	□□□□□ -0.24
UTP4-215	ENST00000569615	FOXQ1	Q9C009	403 aa		13.58	□□□□□ -0.24
UTP4-215	ENST00000569615	XYLT2	Q9H1B5	865 aa		13.58	□□□□□ -0.24
UTP4-215	ENST00000569615	SEMA4A	Q9H3S1	761 aa		13.58	□□□□□ -0.24
UTP4-215	ENST00000569615	CIZ1	Q9ULV3	898 aa	Predicted RBP	13.58	□□□□□ -0.24
UTP4-215	ENST00000569615	PIAS3	Q9Y6X2	628 aa		13.58	□□□□□ -0.24
UTP4-215	ENST00000569615	SLC38A8	A6NNN8	435 aa		13.57	□□□□□ -0.24
UTP4-215	ENST00000569615	PROB1	E7EW31	1015 aa		13.57	□□□□□ -0.24
UTP4-215	ENST00000569615	CETN3	O15182	167 aa		13.57	□□□□□ -0.24
UTP4-215	ENST00000569615	LAMTOR5	O43504	91 aa		13.57	□□□□□ -0.24
UTP4-215	ENST00000569615	F11	P03951	625 aa		13.57	□□□□□ -0.24
UTP4-215	ENST00000569615	EPB41	P11171	864 aa	Known RBP	13.57	□□□□□ -0.24
UTP4-215	ENST00000569615	PTPN1	P18031	435 aa	Known RBP	13.57	□□□□□ -0.24
UTP4-215	ENST00000569615	BDNF	P23560	247 aa		13.57	□□□□□ -0.24
UTP4-215	ENST00000569615	NBL1	P41271	181 aa		13.57	□□□□□ -0.24
UTP4-215	ENST00000569615	PIK3CA	P42336	1068 aa		13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms