RNA–Protein interactions for RNA: ENST00000569001.1

BBS4-215, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 3

Gene BBS4, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-215ENST00000569001 ANAPC15P60006 121 aa3.83□□□□□ -1.8
BBS4-215ENST00000569001 CYP4F2P78329 520 aa3.83□□□□□ -1.8
BBS4-215ENST00000569001 LY6KQ17RY6 165 aa3.83□□□□□ -1.8
BBS4-215ENST00000569001 PLAC9Q5JTB6 97 aa3.83□□□□□ -1.8
BBS4-215ENST00000569001 EMC10Q5UCC4 262 aa3.83□□□□□ -1.8
BBS4-215ENST00000569001 PAPD7Q5XG87 772 aaKnown RBP3.83□□□□□ -1.8
BBS4-215ENST00000569001 ICE2Q659A1 982 aa3.83□□□□□ -1.8
BBS4-215ENST00000569001 DPY19L3Q6ZPD9 716 aa3.83□□□□□ -1.8
BBS4-215ENST00000569001 SLC15A4Q8N697 577 aa3.83□□□□□ -1.8
BBS4-215ENST00000569001 FANCBQ8NB91 859 aa3.83□□□□□ -1.8
BBS4-215ENST00000569001 ZBTB34Q8NCN2 500 aa3.83□□□□□ -1.8
BBS4-215ENST00000569001 DDX17Q92841 729 aaKnown RBP3.83□□□□□ -1.8
BBS4-215ENST00000569001 FAM167AQ96KS9 214 aa3.83□□□□□ -1.8
BBS4-215ENST00000569001 ACO2Q99798 780 aaKnown RBP3.83□□□□□ -1.8
BBS4-215ENST00000569001 CXorf36Q9H7Y0 433 aa3.83□□□□□ -1.8
BBS4-215ENST00000569001 ZMAT3Q9HA38 289 aaKnown RBP3.83□□□□□ -1.8
BBS4-215ENST00000569001 XPR1Q9UBH6 696 aa3.83□□□□□ -1.8
BBS4-215ENST00000569001 GABBR1Q9UBS5 961 aa3.83□□□□□ -1.8
BBS4-215ENST00000569001 NDRG4Q9ULP0 352 aaKnown RBP3.83□□□□□ -1.8
BBS4-215ENST00000569001 NOB1Q9ULX3 412 aaKnown RBP3.83□□□□□ -1.8
BBS4-215ENST00000569001 A1L4Q6 167 aa3.82□□□□□ -1.8
BBS4-215ENST00000569001 LINC01548A6NM66 108 aa3.82□□□□□ -1.8
BBS4-215ENST00000569001 TISP43B9A030 160 aa3.82□□□□□ -1.8
BBS4-215ENST00000569001 INO80B-WBP1J3KQ70 363 aa3.82□□□□□ -1.8
BBS4-215ENST00000569001 QSOX1O00391 747 aa3.82□□□□□ -1.8
BBS4-215ENST00000569001 PRPF3O43395 683 aaKnown RBP3.82□□□□□ -1.8
BBS4-215ENST00000569001 UBXN7O94888 489 aa3.82□□□□□ -1.8
BBS4-215ENST00000569001 NXPH3O95157 252 aa3.82□□□□□ -1.8
BBS4-215ENST00000569001 CSF1RP07333 972 aa3.82□□□□□ -1.8
BBS4-215ENST00000569001 FAM163BP0C2L3 166 aa3.82□□□□□ -1.8
BBS4-215ENST00000569001 ATXN1LP0C7T5 689 aaKnown RBP3.82□□□□□ -1.8
BBS4-215ENST00000569001 ALDH9A1P49189 494 aa3.82□□□□□ -1.8
BBS4-215ENST00000569001 SLC11A2P49281 568 aa3.82□□□□□ -1.8
BBS4-215ENST00000569001 ZNF81P51508 661 aa3.82□□□□□ -1.8
BBS4-215ENST00000569001 LRRC41Q15345 812 aa3.82□□□□□ -1.8
BBS4-215ENST00000569001 SRSF7Q16629 238 aaKnown RBP eCLIP3.82□□□□□ -1.8
BBS4-215ENST00000569001 PCID2Q5JVF3 399 aa3.82□□□□□ -1.8
BBS4-215ENST00000569001 ZNF618Q5T7W0 954 aa3.82□□□□□ -1.8
BBS4-215ENST00000569001 B3GNT9Q6UX72 402 aa3.82□□□□□ -1.8
BBS4-215ENST00000569001 SLC29A4Q7RTT9 530 aa3.82□□□□□ -1.8
BBS4-215ENST00000569001 DTX2Q86UW9 622 aa3.82□□□□□ -1.8
BBS4-215ENST00000569001 DENND1CQ8IV53 801 aa3.82□□□□□ -1.8
BBS4-215ENST00000569001 LRRC71Q8N4P6 559 aa3.82□□□□□ -1.8
BBS4-215ENST00000569001 DNAJC5GQ8N7S2 189 aa3.82□□□□□ -1.8
BBS4-215ENST00000569001 VGLL2Q8N8G2 317 aa3.82□□□□□ -1.8
BBS4-215ENST00000569001 TMEM171Q8WVE6 324 aa3.82□□□□□ -1.8
BBS4-215ENST00000569001 XAGE5Q8WWM1 108 aa3.82□□□□□ -1.8
BBS4-215ENST00000569001 RAPGEF4Q8WZA2 1011 aa3.82□□□□□ -1.8
BBS4-215ENST00000569001 MTFMTQ96DP5 389 aaKnown RBP3.82□□□□□ -1.8
BBS4-215ENST00000569001 C1GALT1C1Q96EU7 318 aa3.82□□□□□ -1.8
BBS4-215ENST00000569001 NUP88Q99567 741 aaPredicted RBP3.82□□□□□ -1.8
BBS4-215ENST00000569001 PTDSS2Q9BVG9 487 aa3.82□□□□□ -1.8
BBS4-215ENST00000569001 QTRT1Q9BXR0 403 aaKnown RBP3.82□□□□□ -1.8
BBS4-215ENST00000569001 INO80BQ9C086 356 aaPredicted RBP3.82□□□□□ -1.8
BBS4-215ENST00000569001 BRINP2Q9C0B6 783 aa3.82□□□□□ -1.8
BBS4-215ENST00000569001 ZIM2Q9NZV7 527 aa3.82□□□□□ -1.8
BBS4-215ENST00000569001 CCNL1Q9UK58 526 aaPredicted RBP3.82□□□□□ -1.8
BBS4-215ENST00000569001 TMX2Q9Y320 296 aa3.82□□□□□ -1.8
BBS4-215ENST00000569001 PLEKHM1Q9Y4G2 1056 aa3.82□□□□□ -1.8
BBS4-215ENST00000569001 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.82□□□□□ -1.8
BBS4-215ENST00000569001 SLC16A3O15427 465 aaKnown RBP3.81□□□□□ -1.8
BBS4-215ENST00000569001 CYP2D6P10635 497 aa3.81□□□□□ -1.8
BBS4-215ENST00000569001 EEFSECP57772 596 aaKnown RBP3.81□□□□□ -1.8
BBS4-215ENST00000569001 MYO1EQ12965 1108 aa3.81□□□□□ -1.8
BBS4-215ENST00000569001 GRM1Q13255 1194 aa3.81□□□□□ -1.8
BBS4-215ENST00000569001 FGL2Q14314 439 aa3.81□□□□□ -1.8
BBS4-215ENST00000569001 PROSER3Q2NL68 480 aa3.81□□□□□ -1.8
BBS4-215ENST00000569001 SUPT20HL1Q3ZLR7 823 aa3.81□□□□□ -1.8
BBS4-215ENST00000569001 AMOTQ4VCS5 1084 aa3.81□□□□□ -1.8
BBS4-215ENST00000569001 CEP78Q5JTW2 689 aa3.81□□□□□ -1.8
BBS4-215ENST00000569001 PRAMEF17Q5VTA0 474 aa3.81□□□□□ -1.8
BBS4-215ENST00000569001 ZNF626Q68DY1 528 aa3.81□□□□□ -1.8
BBS4-215ENST00000569001 EPM2AIP1Q7L775 607 aaPredicted RBP3.81□□□□□ -1.8
BBS4-215ENST00000569001 PTF1AQ7RTS3 328 aa3.81□□□□□ -1.8
BBS4-215ENST00000569001 MPP5Q8N3R9 675 aa3.81□□□□□ -1.8
BBS4-215ENST00000569001 TAAR9Q96RI9 348 aa3.81□□□□□ -1.8
BBS4-215ENST00000569001 CAMKK2Q96RR4 588 aa3.81□□□□□ -1.8
BBS4-215ENST00000569001 GLOD4Q9HC38 313 aa3.81□□□□□ -1.8
BBS4-215ENST00000569001 DUSP22Q9NRW4 184 aa3.81□□□□□ -1.8
BBS4-215ENST00000569001 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.81□□□□□ -1.8
BBS4-215ENST00000569001 THRAP3Q9Y2W1 955 aaKnown RBP3.81□□□□□ -1.8
BBS4-215ENST00000569001 ERC2O15083 957 aa3.8□□□□□ -1.8
BBS4-215ENST00000569001 PRR35P0CG20 571 aa3.8□□□□□ -1.8
BBS4-215ENST00000569001 FPR3P25089 353 aa3.8□□□□□ -1.8
BBS4-215ENST00000569001 CTGFP29279 349 aa3.8□□□□□ -1.8
BBS4-215ENST00000569001 PPIFP30405 207 aaKnown RBP3.8□□□□□ -1.8
BBS4-215ENST00000569001 ATXN1P54253 815 aaKnown RBP3.8□□□□□ -1.8
BBS4-215ENST00000569001 SOX10P56693 466 aa3.8□□□□□ -1.8
BBS4-215ENST00000569001 KRT17Q04695 432 aa3.8□□□□□ -1.8
BBS4-215ENST00000569001 CTBP1Q13363 440 aa3.8□□□□□ -1.8
BBS4-215ENST00000569001 E2F2Q14209 437 aa3.8□□□□□ -1.8
BBS4-215ENST00000569001 LLGL1Q15334 1064 aa3.8□□□□□ -1.8
BBS4-215ENST00000569001 PTCHD3Q3KNS1 767 aa3.8□□□□□ -1.8
BBS4-215ENST00000569001 MTX3Q5HYI7 312 aa3.8□□□□□ -1.8
BBS4-215ENST00000569001 SUMO4Q6EEV6 95 aa3.8□□□□□ -1.8
BBS4-215ENST00000569001 SWSAP1Q6NVH7 229 aa3.8□□□□□ -1.8
BBS4-215ENST00000569001 CEP85Q6P2H3 762 aa3.8□□□□□ -1.8
BBS4-215ENST00000569001 SLC2A7Q6PXP3 512 aa3.8□□□□□ -1.8
BBS4-215ENST00000569001 OVCH2Q7RTZ1 564 aa3.8□□□□□ -1.8
BBS4-215ENST00000569001 DAAM2Q86T65 1068 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms