RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 ITGB3BPQ13352 177 aaPredicted RBP6.35□□□□□ -1.39
CDH13-211ENST00000568770 GIT2Q14161 759 aa6.35□□□□□ -1.39
CDH13-211ENST00000568770 SF1Q15637 639 aaKnown RBP6.35□□□□□ -1.39
CDH13-211ENST00000568770 LETM2Q2VYF4 491 aa6.35□□□□□ -1.39
CDH13-211ENST00000568770 ZNF484Q5JVG2 852 aa6.35□□□□□ -1.39
CDH13-211ENST00000568770 CCDC149Q6ZUS6 474 aa6.35□□□□□ -1.39
CDH13-211ENST00000568770 CATIPQ7Z7H3 387 aa6.35□□□□□ -1.39
CDH13-211ENST00000568770 GPR149Q86SP6 731 aa6.35□□□□□ -1.39
CDH13-211ENST00000568770 TMEM173Q86WV6 379 aaPredicted RBP6.35□□□□□ -1.39
CDH13-211ENST00000568770 ECHDC2Q86YB7 292 aa6.35□□□□□ -1.39
CDH13-211ENST00000568770 CCDC60Q8IWA6 550 aaPredicted RBP6.35□□□□□ -1.39
CDH13-211ENST00000568770 TP53INP2Q8IXH6 220 aa6.35□□□□□ -1.39
CDH13-211ENST00000568770 LILRB2Q8N423 598 aa6.35□□□□□ -1.39
CDH13-211ENST00000568770 METTL13Q8N6R0 699 aa6.35□□□□□ -1.39
CDH13-211ENST00000568770 SUMF1Q8NBK3 374 aa6.35□□□□□ -1.39
CDH13-211ENST00000568770 TMEM169Q96HH4 297 aa6.35□□□□□ -1.39
CDH13-211ENST00000568770 MXRA8Q9BRK3 442 aa6.35□□□□□ -1.39
CDH13-211ENST00000568770 MYL10Q9BUA6 226 aa6.35□□□□□ -1.39
CDH13-211ENST00000568770 SPZ1Q9BXG8 430 aa6.35□□□□□ -1.39
CDH13-211ENST00000568770 IL25Q9H293 177 aa6.35□□□□□ -1.39
CDH13-211ENST00000568770 TBC1D17Q9HA65 648 aa6.35□□□□□ -1.39
CDH13-211ENST00000568770 AGO4Q9HCK5 861 aaKnown RBP6.35□□□□□ -1.39
CDH13-211ENST00000568770 MBNL3Q9NUK0 354 aaKnown RBP6.35□□□□□ -1.39
CDH13-211ENST00000568770 IGSF9Q9P2J2 1179 aa6.35□□□□□ -1.39
CDH13-211ENST00000568770 CA14Q9ULX7 337 aa6.35□□□□□ -1.39
CDH13-211ENST00000568770 PCDHA6Q9UN73 950 aa6.35□□□□□ -1.39
CDH13-211ENST00000568770 PCDHA8Q9Y5H6 950 aa6.35□□□□□ -1.39
CDH13-211ENST00000568770 IRAK3Q9Y616 596 aa6.35□□□□□ -1.39
CDH13-211ENST00000568770 SPEGQ15772 3267 aa6.35□□□□□ -1.39
CDH13-211ENST00000568770 hCG_1642624A0A1W2PR95 340 aa6.34□□□□□ -1.39
CDH13-211ENST00000568770 DDX39AO00148 427 aaKnown RBP6.34□□□□□ -1.39
CDH13-211ENST00000568770 HIP1O00291 1037 aa6.34□□□□□ -1.39
CDH13-211ENST00000568770 ZC3H11AO75152 810 aaKnown RBP eCLIP6.34□□□□□ -1.39
CDH13-211ENST00000568770 ZNF205O95201 554 aa6.34□□□□□ -1.39
CDH13-211ENST00000568770 PLEKHA8P1O95397 391 aa6.34□□□□□ -1.39
CDH13-211ENST00000568770 C22orf31O95567 290 aa6.34□□□□□ -1.39
CDH13-211ENST00000568770 CCNE2O96020 404 aa6.34□□□□□ -1.39
CDH13-211ENST00000568770 RNASE1P07998 156 aaKnown RBP6.34□□□□□ -1.39
CDH13-211ENST00000568770 CTSAP10619 480 aa6.34□□□□□ -1.39
CDH13-211ENST00000568770 SMARCA1P28370 1054 aa6.34□□□□□ -1.39
CDH13-211ENST00000568770 KIF5BP33176 963 aa6.34□□□□□ -1.39
CDH13-211ENST00000568770 POLGP54098 1239 aaPredicted RBP6.34□□□□□ -1.39
CDH13-211ENST00000568770 ATXN1P54253 815 aaKnown RBP6.34□□□□□ -1.39
CDH13-211ENST00000568770 PCBP3P57721 371 aaKnown RBP6.34□□□□□ -1.39
CDH13-211ENST00000568770 NLRP11P59045 1033 aaKnown RBP6.34□□□□□ -1.39
CDH13-211ENST00000568770 SART3Q15020 963 aaKnown RBP6.34□□□□□ -1.39
CDH13-211ENST00000568770 FAM160B1Q5W0V3 765 aa6.34□□□□□ -1.39
CDH13-211ENST00000568770 SWSAP1Q6NVH7 229 aa6.34□□□□□ -1.39
CDH13-211ENST00000568770 ABHD15Q6UXT9 468 aa6.34□□□□□ -1.39
CDH13-211ENST00000568770 C15orf39Q6ZRI6 1047 aa6.34□□□□□ -1.39
CDH13-211ENST00000568770 TRMT1LQ7Z2T5 733 aaKnown RBP6.34□□□□□ -1.39
CDH13-211ENST00000568770 RALYLQ86SE5 291 aaKnown RBP6.34□□□□□ -1.39
CDH13-211ENST00000568770 DDX53Q86TM3 631 aaKnown RBP6.34□□□□□ -1.39
CDH13-211ENST00000568770 C1orf210Q8IVY1 113 aa6.34□□□□□ -1.39
CDH13-211ENST00000568770 TRIM59Q8IWR1 403 aa6.34□□□□□ -1.39
CDH13-211ENST00000568770 Q8N3U1 123 aa6.34□□□□□ -1.39
CDH13-211ENST00000568770 SLC44A3Q8N4M1 653 aa6.34□□□□□ -1.39
CDH13-211ENST00000568770 SRBD1Q8N5C6 995 aaKnown RBP6.34□□□□□ -1.39
CDH13-211ENST00000568770 TMEM52Q8NDY8 209 aa6.34□□□□□ -1.39
CDH13-211ENST00000568770 ST13P5Q8NFI4 369 aaPredicted RBP6.34□□□□□ -1.39
CDH13-211ENST00000568770 CTCFLQ8NI51 663 aaPredicted RBP6.34□□□□□ -1.39
CDH13-211ENST00000568770 BTN2A2Q8WVV5 523 aa6.34□□□□□ -1.39
CDH13-211ENST00000568770 G6PC3Q9BUM1 346 aa6.34□□□□□ -1.39
CDH13-211ENST00000568770 VN1R3Q9BXE9 311 aa6.34□□□□□ -1.39
CDH13-211ENST00000568770 MRPL9Q9BYD2 267 aaKnown RBP6.34□□□□□ -1.39
CDH13-211ENST00000568770 ZNF302Q9NR11 478 aa6.34□□□□□ -1.39
CDH13-211ENST00000568770 AP5S1Q9NUS5 200 aa6.34□□□□□ -1.39
CDH13-211ENST00000568770 C19orf73Q9NVV2 129 aa6.34□□□□□ -1.39
CDH13-211ENST00000568770 DLGAP2Q9P1A6 1054 aa6.34□□□□□ -1.39
CDH13-211ENST00000568770 GPR55Q9Y2T6 319 aaPredicted RBP6.34□□□□□ -1.39
CDH13-211ENST00000568770 SF3B6Q9Y3B4 125 aaKnown RBP6.34□□□□□ -1.39
CDH13-211ENST00000568770 SIT1Q9Y3P8 196 aa6.34□□□□□ -1.39
CDH13-211ENST00000568770 OAS3Q9Y6K5 1087 aaKnown RBP6.34□□□□□ -1.39
CDH13-211ENST00000568770 ANKRD11Q6UB99 2663 aaPredicted RBP6.33□□□□□ -1.4
CDH13-211ENST00000568770 A0A0U1RQF3 1178 aa6.33□□□□□ -1.4
CDH13-211ENST00000568770 E7EWF7 191 aa6.33□□□□□ -1.4
CDH13-211ENST00000568770 KINO60870 393 aaKnown RBP6.33□□□□□ -1.4
CDH13-211ENST00000568770 CD3EP07766 207 aa6.33□□□□□ -1.4
CDH13-211ENST00000568770 CYP21A2P08686 494 aa6.33□□□□□ -1.4
CDH13-211ENST00000568770 GSTM1P09488 218 aa6.33□□□□□ -1.4
CDH13-211ENST00000568770 CNPP09543 421 aaKnown RBP6.33□□□□□ -1.4
CDH13-211ENST00000568770 GLULP15104 373 aa6.33□□□□□ -1.4
CDH13-211ENST00000568770 FGFR4P22455 802 aa6.33□□□□□ -1.4
CDH13-211ENST00000568770 KLRC2P26717 231 aa6.33□□□□□ -1.4
CDH13-211ENST00000568770 RPL10P27635 214 aaKnown RBP6.33□□□□□ -1.4
CDH13-211ENST00000568770 CLCN3P51790 818 aa6.33□□□□□ -1.4
CDH13-211ENST00000568770 CLCN4P51793 760 aa6.33□□□□□ -1.4
CDH13-211ENST00000568770 GP2P55259 537 aaKnown RBP6.33□□□□□ -1.4
CDH13-211ENST00000568770 ANTXR2P58335 489 aa6.33□□□□□ -1.4
CDH13-211ENST00000568770 PPP2R2AP63151 447 aa6.33□□□□□ -1.4
CDH13-211ENST00000568770 PLCL1Q15111 1095 aa6.33□□□□□ -1.4
CDH13-211ENST00000568770 NONOQ15233 471 aaKnown RBP eCLIP6.33□□□□□ -1.4
CDH13-211ENST00000568770 PTPN14Q15678 1187 aa6.33□□□□□ -1.4
CDH13-211ENST00000568770 ST3GAL2Q16842 350 aa6.33□□□□□ -1.4
CDH13-211ENST00000568770 LONRF3Q496Y0 759 aa6.33□□□□□ -1.4
CDH13-211ENST00000568770 MTERF2Q49AM1 385 aa6.33□□□□□ -1.4
CDH13-211ENST00000568770 CEP55Q53EZ4 464 aa6.33□□□□□ -1.4
CDH13-211ENST00000568770 GTF2IRD2BQ6EKJ0 949 aa6.33□□□□□ -1.4
CDH13-211ENST00000568770 RNF111Q6ZNA4 994 aa6.33□□□□□ -1.4
CDH13-211ENST00000568770 GTF2IRD2Q86UP8 949 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms