RNA–Protein interactions for RNA: ENST00000568291.2

SF3B3-211, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,067 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-211ENST00000568291 TSC2P49815 1807 aa10.18□□□□□ -0.78
SF3B3-211ENST00000568291 NUP210Q8TEM1 1887 aaPredicted RBP10.17□□□□□ -0.78
SF3B3-211ENST00000568291 DCHS1Q96JQ0 3298 aa10.17□□□□□ -0.78
SF3B3-211ENST00000568291 GABRDO14764 452 aa10.17□□□□□ -0.78
SF3B3-211ENST00000568291 SMC2O95347 1197 aa10.17□□□□□ -0.78
SF3B3-211ENST00000568291 HAPLN1P10915 354 aaPredicted RBP10.17□□□□□ -0.78
SF3B3-211ENST00000568291 GNL1P36915 607 aaPredicted RBP10.17□□□□□ -0.78
SF3B3-211ENST00000568291 MAGEA9P43362 315 aa10.17□□□□□ -0.78
SF3B3-211ENST00000568291 CLCN6P51797 869 aa10.17□□□□□ -0.78
SF3B3-211ENST00000568291 VAMP7P51809 220 aa10.17□□□□□ -0.78
SF3B3-211ENST00000568291 EPHB3P54753 998 aa10.17□□□□□ -0.78
SF3B3-211ENST00000568291 CYP4F8P98187 520 aa10.17□□□□□ -0.78
SF3B3-211ENST00000568291 TSPY1Q01534 308 aa10.17□□□□□ -0.78
SF3B3-211ENST00000568291 PLD1Q13393 1074 aa10.17□□□□□ -0.78
SF3B3-211ENST00000568291 NCOA4Q13772 614 aa10.17□□□□□ -0.78
SF3B3-211ENST00000568291 GRM2Q14416 872 aa10.17□□□□□ -0.78
SF3B3-211ENST00000568291 ZCWPW2Q504Y3 356 aa10.17□□□□□ -0.78
SF3B3-211ENST00000568291 SLC44A4Q53GD3 710 aa10.17□□□□□ -0.78
SF3B3-211ENST00000568291 INTS6LQ5JSJ4 861 aaKnown RBP10.17□□□□□ -0.78
SF3B3-211ENST00000568291 ZNF658Q5TYW1 1059 aaPredicted RBP10.17□□□□□ -0.78
SF3B3-211ENST00000568291 TPRG1Q6ZUI0 275 aa10.17□□□□□ -0.78
SF3B3-211ENST00000568291 SV2AQ7L0J3 742 aa10.17□□□□□ -0.78
SF3B3-211ENST00000568291 SCN4BQ8IWT1 228 aa10.17□□□□□ -0.78
SF3B3-211ENST00000568291 FAM186BQ8IYM0 893 aa10.17□□□□□ -0.78
SF3B3-211ENST00000568291 DCP1BQ8IZD4 617 aaKnown RBP10.17□□□□□ -0.78
SF3B3-211ENST00000568291 MAML2Q8IZL2 1156 aaPredicted RBP10.17□□□□□ -0.78
SF3B3-211ENST00000568291 ELMOD1Q8N336 334 aa10.17□□□□□ -0.78
SF3B3-211ENST00000568291 TOP6BLQ8N6T0 577 aa10.17□□□□□ -0.78
SF3B3-211ENST00000568291 RUBCNQ92622 972 aa10.17□□□□□ -0.78
SF3B3-211ENST00000568291 TIGD1Q96MW7 591 aa10.17□□□□□ -0.78
SF3B3-211ENST00000568291 PKMYT1Q99640 499 aa10.17□□□□□ -0.78
SF3B3-211ENST00000568291 ACBD6Q9BR61 282 aa10.17□□□□□ -0.78
SF3B3-211ENST00000568291 SMG9Q9H0W8 520 aaKnown RBP10.17□□□□□ -0.78
SF3B3-211ENST00000568291 SNX25Q9H3E2 840 aa10.17□□□□□ -0.78
SF3B3-211ENST00000568291 SLITRK6Q9H5Y7 841 aa10.17□□□□□ -0.78
SF3B3-211ENST00000568291 LTB4R2Q9NPC1 389 aa10.17□□□□□ -0.78
SF3B3-211ENST00000568291 ASAH2Q9NR71 780 aa10.17□□□□□ -0.78
SF3B3-211ENST00000568291 MAGED2Q9UNF1 606 aaPredicted RBP10.17□□□□□ -0.78
SF3B3-211ENST00000568291 FRMD4BQ9Y2L6 1034 aa10.17□□□□□ -0.78
SF3B3-211ENST00000568291 MTF2Q9Y483 593 aaPredicted RBP10.17□□□□□ -0.78
SF3B3-211ENST00000568291 PCDHB5Q9Y5E4 795 aa10.17□□□□□ -0.78
SF3B3-211ENST00000568291 RALGAPA1Q6GYQ0 2036 aa10.17□□□□□ -0.78
SF3B3-211ENST00000568291 TCHHQ07283 1943 aa10.16□□□□□ -0.78
SF3B3-211ENST00000568291 FAM170BA6NMN3 283 aa10.16□□□□□ -0.78
SF3B3-211ENST00000568291 CLDN5O00501 218 aa10.16□□□□□ -0.78
SF3B3-211ENST00000568291 ECI2O75521 394 aa10.16□□□□□ -0.78
SF3B3-211ENST00000568291 KIF20AO95235 890 aa10.16□□□□□ -0.78
SF3B3-211ENST00000568291 HLA-DRAP01903 254 aa10.16□□□□□ -0.78
SF3B3-211ENST00000568291 CD72P21854 359 aa10.16□□□□□ -0.78
SF3B3-211ENST00000568291 BDNFP23560 247 aa10.16□□□□□ -0.78
SF3B3-211ENST00000568291 PAX3P23760 479 aa10.16□□□□□ -0.78
SF3B3-211ENST00000568291 TARSP26639 723 aaKnown RBP10.16□□□□□ -0.78
SF3B3-211ENST00000568291 GABRR2P28476 465 aa10.16□□□□□ -0.78
SF3B3-211ENST00000568291 STX17P56962 302 aa10.16□□□□□ -0.78
SF3B3-211ENST00000568291 TNNC1P63316 161 aa10.16□□□□□ -0.78
SF3B3-211ENST00000568291 CLDN10P78369 228 aa10.16□□□□□ -0.78
SF3B3-211ENST00000568291 MYL7Q01449 175 aa10.16□□□□□ -0.78
SF3B3-211ENST00000568291 CYP27A1Q02318 531 aa10.16□□□□□ -0.78
SF3B3-211ENST00000568291 TAF12Q16514 161 aa10.16□□□□□ -0.78
SF3B3-211ENST00000568291 ZNF699Q32M78 642 aa10.16□□□□□ -0.78
SF3B3-211ENST00000568291 ZNF528Q3MIS6 628 aa10.16□□□□□ -0.78
SF3B3-211ENST00000568291 MDH1BQ5I0G3 518 aa10.16□□□□□ -0.78
SF3B3-211ENST00000568291 GAREM2Q75VX8 874 aa10.16□□□□□ -0.78
SF3B3-211ENST00000568291 RTL10Q7L3V2 364 aa10.16□□□□□ -0.78
SF3B3-211ENST00000568291 DGLUCYQ7Z3D6 616 aa10.16□□□□□ -0.78
SF3B3-211ENST00000568291 LIMS2Q7Z4I7 341 aa10.16□□□□□ -0.78
SF3B3-211ENST00000568291 TMC8Q8IU68 726 aa10.16□□□□□ -0.78
SF3B3-211ENST00000568291 SPATA2LQ8IUW3 424 aaPredicted RBP10.16□□□□□ -0.78
SF3B3-211ENST00000568291 TMEM86AQ8N2M4 240 aa10.16□□□□□ -0.78
SF3B3-211ENST00000568291 DCLK2Q8N568 766 aa10.16□□□□□ -0.78
SF3B3-211ENST00000568291 SUMF1Q8NBK3 374 aa10.16□□□□□ -0.78
SF3B3-211ENST00000568291 SPATA20Q8TB22 786 aa10.16□□□□□ -0.78
SF3B3-211ENST00000568291 TAS1R2Q8TE23 839 aa10.16□□□□□ -0.78
SF3B3-211ENST00000568291 MYLPFQ96A32 169 aa10.16□□□□□ -0.78
SF3B3-211ENST00000568291 RSPRY1Q96DX4 576 aa10.16□□□□□ -0.78
SF3B3-211ENST00000568291 GSDMAQ96QA5 445 aa10.16□□□□□ -0.78
SF3B3-211ENST00000568291 SYT15Q9BQS2 421 aa10.16□□□□□ -0.78
SF3B3-211ENST00000568291 OXCT2Q9BYC2 517 aaPredicted RBP10.16□□□□□ -0.78
SF3B3-211ENST00000568291 OSBPL6Q9BZF3 934 aa10.16□□□□□ -0.78
SF3B3-211ENST00000568291 ATXN3LQ9H3M9 355 aa10.16□□□□□ -0.78
SF3B3-211ENST00000568291 RMND1Q9NWS8 449 aa10.16□□□□□ -0.78
SF3B3-211ENST00000568291 GDE1Q9NZC3 331 aa10.16□□□□□ -0.78
SF3B3-211ENST00000568291 NCDNQ9UBB6 729 aa10.16□□□□□ -0.78
SF3B3-211ENST00000568291 HMGXB4Q9UGU5 601 aa10.16□□□□□ -0.78
SF3B3-211ENST00000568291 FBXO4Q9UKT5 387 aa10.16□□□□□ -0.78
SF3B3-211ENST00000568291 KIF26AQ9ULI4 1882 aaPredicted RBP10.16□□□□□ -0.78
SF3B3-211ENST00000568291 NCANO14594 1321 aa10.15□□□□□ -0.78
SF3B3-211ENST00000568291 TPRP12270 2363 aaKnown RBP10.15□□□□□ -0.78
SF3B3-211ENST00000568291 CACNA1BQ00975 2339 aa10.15□□□□□ -0.78
SF3B3-211ENST00000568291 MED19A0JLT2 244 aaPredicted RBP10.15□□□□□ -0.78
SF3B3-211ENST00000568291 A8MXQ7 604 aa10.15□□□□□ -0.78
SF3B3-211ENST00000568291 PPP1R3GB7ZBB8 358 aa10.15□□□□□ -0.78
SF3B3-211ENST00000568291 KRT13P13646 458 aa10.15□□□□□ -0.78
SF3B3-211ENST00000568291 WARSP23381 471 aaKnown RBP10.15□□□□□ -0.78
SF3B3-211ENST00000568291 FCARP24071 287 aa10.15□□□□□ -0.78
SF3B3-211ENST00000568291 RPL13P26373 211 aaKnown RBP10.15□□□□□ -0.78
SF3B3-211ENST00000568291 PSMC2P35998 433 aaKnown RBP10.15□□□□□ -0.78
SF3B3-211ENST00000568291 PIK3CAP42336 1068 aa10.15□□□□□ -0.78
SF3B3-211ENST00000568291 LHX1P48742 406 aa10.15□□□□□ -0.78
SF3B3-211ENST00000568291 TUFMP49411 452 aaKnown RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms