RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 EPG5Q9HCE0 2579 aa11.98□□□□□ -0.49
CDH3-206ENST00000567674 A0A1W2PRU2 124 aa11.97□□□□□ -0.49
CDH3-206ENST00000567674 ARNTLO00327 626 aa11.97□□□□□ -0.49
CDH3-206ENST00000567674 DPYSL4O14531 572 aa11.97□□□□□ -0.49
CDH3-206ENST00000567674 TRIM66O15016 1216 aa11.97□□□□□ -0.49
CDH3-206ENST00000567674 ZNF202O95125 648 aa11.97□□□□□ -0.49
CDH3-206ENST00000567674 CST3P01034 146 aaPredicted RBP11.97□□□□□ -0.49
CDH3-206ENST00000567674 F11P03951 625 aa11.97□□□□□ -0.49
CDH3-206ENST00000567674 DLATP10515 647 aaKnown RBP11.97□□□□□ -0.49
CDH3-206ENST00000567674 HMGA1P17096 107 aaKnown RBP11.97□□□□□ -0.49
CDH3-206ENST00000567674 ATF6P18850 670 aa11.97□□□□□ -0.49
CDH3-206ENST00000567674 GTF2H1P32780 548 aa11.97□□□□□ -0.49
CDH3-206ENST00000567674 GNL1P36915 607 aaPredicted RBP11.97□□□□□ -0.49
CDH3-206ENST00000567674 TNNC1P63316 161 aa11.97□□□□□ -0.49
CDH3-206ENST00000567674 NOP14P78316 857 aaKnown RBP11.97□□□□□ -0.49
CDH3-206ENST00000567674 SNW1Q13573 536 aaKnown RBP11.97□□□□□ -0.49
CDH3-206ENST00000567674 TEAD2Q15562 447 aa11.97□□□□□ -0.49
CDH3-206ENST00000567674 EDRF1Q3B7T1 1238 aa11.97□□□□□ -0.49
CDH3-206ENST00000567674 FOXD4L6Q3SYB3 417 aaPredicted RBP11.97□□□□□ -0.49
CDH3-206ENST00000567674 FOXR2Q6PJQ5 311 aa11.97□□□□□ -0.49
CDH3-206ENST00000567674 VITQ6UXI7 678 aa11.97□□□□□ -0.49
CDH3-206ENST00000567674 FOXD4L3Q6VB84 417 aaPredicted RBP11.97□□□□□ -0.49
CDH3-206ENST00000567674 RALGPS2Q86X27 583 aaPredicted RBP11.97□□□□□ -0.49
CDH3-206ENST00000567674 C1orf210Q8IVY1 113 aa11.97□□□□□ -0.49
CDH3-206ENST00000567674 NELFCDQ8IXH7 590 aa11.97□□□□□ -0.49
CDH3-206ENST00000567674 YAF2Q8IY57 180 aa11.97□□□□□ -0.49
CDH3-206ENST00000567674 TTC39CQ8N584 583 aa11.97□□□□□ -0.49
CDH3-206ENST00000567674 KIAA0895Q8NCT3 520 aa11.97□□□□□ -0.49
CDH3-206ENST00000567674 FAM200AQ8TCP9 573 aa11.97□□□□□ -0.49
CDH3-206ENST00000567674 ING5Q8WYH8 240 aa11.97□□□□□ -0.49
CDH3-206ENST00000567674 OVCA2Q8WZ82 227 aa11.97□□□□□ -0.49
CDH3-206ENST00000567674 MRPS31Q92665 395 aaKnown RBP11.97□□□□□ -0.49
CDH3-206ENST00000567674 HPS3Q969F9 1004 aa11.97□□□□□ -0.49
CDH3-206ENST00000567674 TNIP3Q96KP6 325 aa11.97□□□□□ -0.49
CDH3-206ENST00000567674 C8orf48Q96LL4 319 aa11.97□□□□□ -0.49
CDH3-206ENST00000567674 ZSWIM3Q96MP5 696 aa11.97□□□□□ -0.49
CDH3-206ENST00000567674 KXD1Q9BQD3 176 aa11.97□□□□□ -0.49
CDH3-206ENST00000567674 SLITRK6Q9H5Y7 841 aa11.97□□□□□ -0.49
CDH3-206ENST00000567674 IL21Q9HBE4 155 aa11.97□□□□□ -0.49
CDH3-206ENST00000567674 LTB4R2Q9NPC1 389 aa11.97□□□□□ -0.49
CDH3-206ENST00000567674 ABI2Q9NYB9 513 aaPredicted RBP11.97□□□□□ -0.49
CDH3-206ENST00000567674 CA14Q9ULX7 337 aa11.97□□□□□ -0.49
CDH3-206ENST00000567674 DMXL1Q9Y485 3027 aa11.97□□□□□ -0.49
CDH3-206ENST00000567674 DOCK6Q96HP0 2047 aa11.96□□□□□ -0.49
CDH3-206ENST00000567674 TSC2P49815 1807 aa11.96□□□□□ -0.49
CDH3-206ENST00000567674 GOLGA6L4A6NEF3 574 aa11.96□□□□□ -0.49
CDH3-206ENST00000567674 FAM170BA6NMN3 283 aa11.96□□□□□ -0.49
CDH3-206ENST00000567674 HEPACAM2A8MVW5 462 aa11.96□□□□□ -0.49
CDH3-206ENST00000567674 CLIC2O15247 247 aa11.96□□□□□ -0.49
CDH3-206ENST00000567674 PI15O43692 258 aa11.96□□□□□ -0.49
CDH3-206ENST00000567674 STX10O60499 249 aa11.96□□□□□ -0.49
CDH3-206ENST00000567674 C4BPAP04003 597 aaKnown RBP11.96□□□□□ -0.49
CDH3-206ENST00000567674 AVPR1AP37288 418 aa11.96□□□□□ -0.49
CDH3-206ENST00000567674 CYP2J2P51589 502 aa11.96□□□□□ -0.49
CDH3-206ENST00000567674 NRLP54845 237 aa11.96□□□□□ -0.49
CDH3-206ENST00000567674 NLRP12P59046 1061 aa11.96□□□□□ -0.49
CDH3-206ENST00000567674 ANGPT1Q15389 498 aa11.96□□□□□ -0.49
CDH3-206ENST00000567674 WDR72Q3MJ13 1102 aa11.96□□□□□ -0.49
CDH3-206ENST00000567674 ZACNQ401N2 412 aa11.96□□□□□ -0.49
CDH3-206ENST00000567674 SMYD5Q6GMV2 418 aa11.96□□□□□ -0.49
CDH3-206ENST00000567674 MON1AQ86VX9 555 aa11.96□□□□□ -0.49
CDH3-206ENST00000567674 UNC93AQ86WB7 457 aa11.96□□□□□ -0.49
CDH3-206ENST00000567674 CMTM8Q8IZV2 173 aa11.96□□□□□ -0.49
CDH3-206ENST00000567674 RDH13Q8NBN7 331 aa11.96□□□□□ -0.49
CDH3-206ENST00000567674 SPRYD3Q8NCJ5 442 aa11.96□□□□□ -0.49
CDH3-206ENST00000567674 CCDC26Q8TAB7 109 aa11.96□□□□□ -0.49
CDH3-206ENST00000567674 SPATA20Q8TB22 786 aa11.96□□□□□ -0.49
CDH3-206ENST00000567674 BPIFB1Q8TDL5 484 aa11.96□□□□□ -0.49
CDH3-206ENST00000567674 CSGALNACT1Q8TDX6 532 aa11.96□□□□□ -0.49
CDH3-206ENST00000567674 KBTBD7Q8WVZ9 684 aa11.96□□□□□ -0.49
CDH3-206ENST00000567674 DUSP9Q99956 384 aaKnown RBP11.96□□□□□ -0.49
CDH3-206ENST00000567674 SYT15Q9BQS2 421 aa11.96□□□□□ -0.49
CDH3-206ENST00000567674 TTLL2Q9BWV7 592 aa11.96□□□□□ -0.49
CDH3-206ENST00000567674 PLA2G2FQ9BZM2 168 aa11.96□□□□□ -0.49
CDH3-206ENST00000567674 ELOVL4Q9GZR5 314 aa11.96□□□□□ -0.49
CDH3-206ENST00000567674 XYLT2Q9H1B5 865 aa11.96□□□□□ -0.49
CDH3-206ENST00000567674 SNX25Q9H3E2 840 aa11.96□□□□□ -0.49
CDH3-206ENST00000567674 GTF3C4Q9UKN8 822 aa11.96□□□□□ -0.49
CDH3-206ENST00000567674 FAM186AA6NE01 2351 aa11.96□□□□□ -0.5
CDH3-206ENST00000567674 ATP8B3O60423 1300 aa11.95□□□□□ -0.5
CDH3-206ENST00000567674 PTPRJQ12913 1337 aa11.95□□□□□ -0.5
CDH3-206ENST00000567674 PHACTR2O75167 634 aa11.95□□□□□ -0.5
CDH3-206ENST00000567674 SMC2O95347 1197 aa11.95□□□□□ -0.5
CDH3-206ENST00000567674 NR3C1P04150 777 aa11.95□□□□□ -0.5
CDH3-206ENST00000567674 PRKCSHP14314 528 aaPredicted RBP11.95□□□□□ -0.5
CDH3-206ENST00000567674 GDI1P31150 447 aa11.95□□□□□ -0.5
CDH3-206ENST00000567674 PSMC2P35998 433 aaKnown RBP11.95□□□□□ -0.5
CDH3-206ENST00000567674 DGKKQ5KSL6 1271 aa11.95□□□□□ -0.5
CDH3-206ENST00000567674 GPR158Q5T848 1215 aa11.95□□□□□ -0.5
CDH3-206ENST00000567674 POTEHQ6S545 545 aa11.95□□□□□ -0.5
CDH3-206ENST00000567674 FMR1NBQ8N0W7 255 aaPredicted RBP11.95□□□□□ -0.5
CDH3-206ENST00000567674 ZNF687Q8N1G0 1237 aa11.95□□□□□ -0.5
CDH3-206ENST00000567674 ZNF516Q92618 1163 aa11.95□□□□□ -0.5
CDH3-206ENST00000567674 CCDC127Q96BQ5 260 aa11.95□□□□□ -0.5
CDH3-206ENST00000567674 MMS19Q96T76 1030 aa11.95□□□□□ -0.5
CDH3-206ENST00000567674 GZF1Q9H116 711 aaPredicted RBP11.95□□□□□ -0.5
CDH3-206ENST00000567674 TDP1Q9NUW8 608 aa11.95□□□□□ -0.5
CDH3-206ENST00000567674 DLL3Q9NYJ7 618 aa11.95□□□□□ -0.5
CDH3-206ENST00000567674 CIZ1Q9ULV3 898 aaPredicted RBP11.95□□□□□ -0.5
CDH3-206ENST00000567674 RIF1Q5UIP0 2472 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms