RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 SPAG17Q6Q759 2223 aa7.4□□□□□ -1.22
SF3B3-209ENST00000567635 MYBPHLA2RUH7 354 aa7.4□□□□□ -1.22
SF3B3-209ENST00000567635 GOLGA6L4A6NEF3 574 aa7.4□□□□□ -1.22
SF3B3-209ENST00000567635 SOBPA7XYQ1 873 aa7.4□□□□□ -1.22
SF3B3-209ENST00000567635 PROB1E7EW31 1015 aa7.4□□□□□ -1.22
SF3B3-209ENST00000567635 MAN2B1O00754 1011 aa7.4□□□□□ -1.22
SF3B3-209ENST00000567635 CHADO15335 359 aa7.4□□□□□ -1.22
SF3B3-209ENST00000567635 NCAM2O15394 837 aa7.4□□□□□ -1.22
SF3B3-209ENST00000567635 CALUO43852 315 aaPredicted RBP7.4□□□□□ -1.22
SF3B3-209ENST00000567635 RHOBTB3O94955 611 aa7.4□□□□□ -1.22
SF3B3-209ENST00000567635 STAU1O95793 577 aaKnown RBP7.4□□□□□ -1.22
SF3B3-209ENST00000567635 F11P03951 625 aa7.4□□□□□ -1.22
SF3B3-209ENST00000567635 NR3C1P04150 777 aa7.4□□□□□ -1.22
SF3B3-209ENST00000567635 GLULP15104 373 aa7.4□□□□□ -1.22
SF3B3-209ENST00000567635 HMGA1P17096 107 aaKnown RBP7.4□□□□□ -1.22
SF3B3-209ENST00000567635 CD72P21854 359 aa7.4□□□□□ -1.22
SF3B3-209ENST00000567635 ATICP31939 592 aa7.4□□□□□ -1.22
SF3B3-209ENST00000567635 MAGEA11P43364 429 aa7.4□□□□□ -1.22
SF3B3-209ENST00000567635 NLRP12P59046 1061 aa7.4□□□□□ -1.22
SF3B3-209ENST00000567635 MYL6P60660 151 aa7.4□□□□□ -1.22
SF3B3-209ENST00000567635 TNNC1P63316 161 aa7.4□□□□□ -1.22
SF3B3-209ENST00000567635 CLDN10P78369 228 aa7.4□□□□□ -1.22
SF3B3-209ENST00000567635 NUCB2P80303 420 aa7.4□□□□□ -1.22
SF3B3-209ENST00000567635 DPYDQ12882 1025 aa7.4□□□□□ -1.22
SF3B3-209ENST00000567635 UBXN2BQ14CS0 331 aa7.4□□□□□ -1.22
SF3B3-209ENST00000567635 WDR72Q3MJ13 1102 aa7.4□□□□□ -1.22
SF3B3-209ENST00000567635 CFAP221Q4G0U5 840 aa7.4□□□□□ -1.22
SF3B3-209ENST00000567635 STXBP5Q5T5C0 1151 aa7.4□□□□□ -1.22
SF3B3-209ENST00000567635 C4orf50Q6ZRC1 276 aa7.4□□□□□ -1.22
SF3B3-209ENST00000567635 TPRG1Q6ZUI0 275 aa7.4□□□□□ -1.22
SF3B3-209ENST00000567635 SPATA2LQ8IUW3 424 aaPredicted RBP7.4□□□□□ -1.22
SF3B3-209ENST00000567635 C1orf210Q8IVY1 113 aa7.4□□□□□ -1.22
SF3B3-209ENST00000567635 SCN4BQ8IWT1 228 aa7.4□□□□□ -1.22
SF3B3-209ENST00000567635 OR6B3Q8NGW1 331 aa7.4□□□□□ -1.22
SF3B3-209ENST00000567635 PLEKHO2Q8TD55 490 aa7.4□□□□□ -1.22
SF3B3-209ENST00000567635 TMC2Q8TDI7 906 aa7.4□□□□□ -1.22
SF3B3-209ENST00000567635 PARD3BQ8TEW8 1205 aa7.4□□□□□ -1.22
SF3B3-209ENST00000567635 KBTBD7Q8WVZ9 684 aa7.4□□□□□ -1.22
SF3B3-209ENST00000567635 SYAP1Q96A49 352 aaPredicted RBP7.4□□□□□ -1.22
SF3B3-209ENST00000567635 CLDN23Q96B33 292 aa7.4□□□□□ -1.22
SF3B3-209ENST00000567635 FUBP3Q96I24 572 aaKnown RBP eCLIP7.4□□□□□ -1.22
SF3B3-209ENST00000567635 SYT15Q9BQS2 421 aa7.4□□□□□ -1.22
SF3B3-209ENST00000567635 MKNK1Q9BUB5 465 aa7.4□□□□□ -1.22
SF3B3-209ENST00000567635 SLC46A2Q9BY10 475 aa7.4□□□□□ -1.22
SF3B3-209ENST00000567635 BCO2Q9BYV7 579 aa7.4□□□□□ -1.22
SF3B3-209ENST00000567635 GZF1Q9H116 711 aaPredicted RBP7.4□□□□□ -1.22
SF3B3-209ENST00000567635 GOLPH3LQ9H4A5 285 aa7.4□□□□□ -1.22
SF3B3-209ENST00000567635 IL21Q9HBE4 155 aa7.4□□□□□ -1.22
SF3B3-209ENST00000567635 GDPD2Q9HCC8 539 aa7.4□□□□□ -1.22
SF3B3-209ENST00000567635 THG1LQ9NWX6 298 aaKnown RBP7.4□□□□□ -1.22
SF3B3-209ENST00000567635 OBP2AQ9NY56 170 aa7.4□□□□□ -1.22
SF3B3-209ENST00000567635 MAGEC2Q9UBF1 373 aaPredicted RBP7.4□□□□□ -1.22
SF3B3-209ENST00000567635 ZMYM5Q9UJ78 669 aa7.4□□□□□ -1.22
SF3B3-209ENST00000567635 MAGED2Q9UNF1 606 aaPredicted RBP7.4□□□□□ -1.22
SF3B3-209ENST00000567635 FRMD4BQ9Y2L6 1034 aa7.4□□□□□ -1.22
SF3B3-209ENST00000567635 HELZP42694 1942 aaKnown RBP7.4□□□□□ -1.23
SF3B3-209ENST00000567635 SPTBN4Q9H254 2564 aa7.4□□□□□ -1.23
SF3B3-209ENST00000567635 COL4A3Q01955 1670 aa7.39□□□□□ -1.23
SF3B3-209ENST00000567635 SLC38A8A6NNN8 435 aa7.39□□□□□ -1.23
SF3B3-209ENST00000567635 LRRIQ3A6PVS8 624 aaPredicted RBP7.39□□□□□ -1.23
SF3B3-209ENST00000567635 IKBKBO14920 756 aa7.39□□□□□ -1.23
SF3B3-209ENST00000567635 HCRTO43612 131 aa7.39□□□□□ -1.23
SF3B3-209ENST00000567635 LRRN2O75325 713 aa7.39□□□□□ -1.23
SF3B3-209ENST00000567635 TACC1O75410 805 aa7.39□□□□□ -1.23
SF3B3-209ENST00000567635 C4BPAP04003 597 aaKnown RBP7.39□□□□□ -1.23
SF3B3-209ENST00000567635 PTPN1P18031 435 aaKnown RBP7.39□□□□□ -1.23
SF3B3-209ENST00000567635 BDNFP23560 247 aa7.39□□□□□ -1.23
SF3B3-209ENST00000567635 DDX6P26196 483 aaKnown RBP eCLIP7.39□□□□□ -1.23
SF3B3-209ENST00000567635 RPL13P26373 211 aaKnown RBP7.39□□□□□ -1.23
SF3B3-209ENST00000567635 NBL1P41271 181 aa7.39□□□□□ -1.23
SF3B3-209ENST00000567635 MAGEA9P43362 315 aa7.39□□□□□ -1.23
SF3B3-209ENST00000567635 CASP4P49662 377 aa7.39□□□□□ -1.23
SF3B3-209ENST00000567635 GPR15P49685 360 aa7.39□□□□□ -1.23
SF3B3-209ENST00000567635 MLLT6P55198 1093 aaPredicted RBP7.39□□□□□ -1.23
SF3B3-209ENST00000567635 CYP4F8P98187 520 aa7.39□□□□□ -1.23
SF3B3-209ENST00000567635 FCHO2Q0JRZ9 810 aa7.39□□□□□ -1.23
SF3B3-209ENST00000567635 BIRC3Q13489 604 aa7.39□□□□□ -1.23
SF3B3-209ENST00000567635 KCNB1Q14721 858 aa7.39□□□□□ -1.23
SF3B3-209ENST00000567635 SGSM1Q2NKQ1 1148 aa7.39□□□□□ -1.23
SF3B3-209ENST00000567635 ARHGAP29Q52LW3 1261 aa7.39□□□□□ -1.23
SF3B3-209ENST00000567635 SDHAF4Q5VUM1 108 aa7.39□□□□□ -1.23
SF3B3-209ENST00000567635 TDRD10Q5VZ19 366 aaKnown RBP7.39□□□□□ -1.23
SF3B3-209ENST00000567635 VSTM1Q6UX27 236 aa7.39□□□□□ -1.23
SF3B3-209ENST00000567635 TMEM150AQ86TG1 271 aa7.39□□□□□ -1.23
SF3B3-209ENST00000567635 MON1AQ86VX9 555 aa7.39□□□□□ -1.23
SF3B3-209ENST00000567635 CMTM8Q8IZV2 173 aa7.39□□□□□ -1.23
SF3B3-209ENST00000567635 CELF5Q8N6W0 485 aaKnown RBP7.39□□□□□ -1.23
SF3B3-209ENST00000567635 MAB21L3Q8N8X9 362 aa7.39□□□□□ -1.23
SF3B3-209ENST00000567635 MYCBPAPQ8TBZ2 947 aa7.39□□□□□ -1.23
SF3B3-209ENST00000567635 CSGALNACT1Q8TDX6 532 aa7.39□□□□□ -1.23
SF3B3-209ENST00000567635 MRPS31Q92665 395 aaKnown RBP7.39□□□□□ -1.23
SF3B3-209ENST00000567635 RSPRY1Q96DX4 576 aa7.39□□□□□ -1.23
SF3B3-209ENST00000567635 TRMT2BQ96GJ1 504 aaKnown RBP7.39□□□□□ -1.23
SF3B3-209ENST00000567635 SPATA17Q96L03 361 aa7.39□□□□□ -1.23
SF3B3-209ENST00000567635 MYRFLQ96LU7 910 aa7.39□□□□□ -1.23
SF3B3-209ENST00000567635 CEP295NLQ96MC4 621 aa7.39□□□□□ -1.23
SF3B3-209ENST00000567635 LRRC3BQ96PB8 259 aa7.39□□□□□ -1.23
SF3B3-209ENST00000567635 MRPL45Q9BRJ2 306 aaKnown RBP7.39□□□□□ -1.23
SF3B3-209ENST00000567635 XYLT2Q9H1B5 865 aa7.39□□□□□ -1.23
SF3B3-209ENST00000567635 LTB4R2Q9NPC1 389 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms