RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 TLK2Q86UE8 772 aa18.68■□□□□ 0.58
CMTM3-214ENST00000567572 SOCS4Q8WXH5 440 aa18.68■□□□□ 0.58
CMTM3-214ENST00000567572 CFAP57Q96MR6 1250 aa18.68■□□□□ 0.58
CMTM3-214ENST00000567572 HEMGNQ9BXL5 484 aa18.68■□□□□ 0.58
CMTM3-214ENST00000567572 ZFYVE28Q9HCC9 887 aa18.68■□□□□ 0.58
CMTM3-214ENST00000567572 TMEM120BA0PK00 339 aa18.68■□□□□ 0.58
CMTM3-214ENST00000567572 DNALI1O14645 258 aaPredicted RBP18.68■□□□□ 0.58
CMTM3-214ENST00000567572 KYNUQ16719 465 aa18.68■□□□□ 0.58
CMTM3-214ENST00000567572 PPP1R15BQ5SWA1 713 aa18.68■□□□□ 0.58
CMTM3-214ENST00000567572 LLGL2Q6P1M3 1020 aa18.68■□□□□ 0.58
CMTM3-214ENST00000567572 PPP1R21Q6ZMI0 780 aa18.68■□□□□ 0.58
CMTM3-214ENST00000567572 ZNF410Q86VK4 478 aa18.68■□□□□ 0.58
CMTM3-214ENST00000567572 DYDC1Q8WWB3 177 aa18.68■□□□□ 0.58
CMTM3-214ENST00000567572 NKD2Q969F2 451 aaPredicted RBP18.68■□□□□ 0.58
CMTM3-214ENST00000567572 LENG1Q96BZ8 264 aaPredicted RBP18.68■□□□□ 0.58
CMTM3-214ENST00000567572 UBN1Q9NPG3 1134 aa18.68■□□□□ 0.58
CMTM3-214ENST00000567572 IL18RAPO95256 599 aa18.67■□□□□ 0.58
CMTM3-214ENST00000567572 OAS1P00973 400 aaKnown RBP18.67■□□□□ 0.58
CMTM3-214ENST00000567572 CST3P01034 146 aaPredicted RBP18.67■□□□□ 0.58
CMTM3-214ENST00000567572 KRT1P04264 644 aa18.67■□□□□ 0.58
CMTM3-214ENST00000567572 VIMP08670 466 aaKnown RBP18.67■□□□□ 0.58
CMTM3-214ENST00000567572 ARF4P18085 180 aaPredicted RBP18.67■□□□□ 0.58
CMTM3-214ENST00000567572 GSCP56915 257 aaPredicted RBP18.67■□□□□ 0.58
CMTM3-214ENST00000567572 OSTNP61366 133 aa18.67■□□□□ 0.58
CMTM3-214ENST00000567572 SREBF2Q12772 1141 aa18.67■□□□□ 0.58
CMTM3-214ENST00000567572 CRHR2Q13324 411 aa18.67■□□□□ 0.58
CMTM3-214ENST00000567572 RASA2Q15283 850 aa18.67■□□□□ 0.58
CMTM3-214ENST00000567572 VSTM1Q6UX27 236 aa18.67■□□□□ 0.58
CMTM3-214ENST00000567572 ARHGEF18Q6ZSZ5 1173 aa18.67■□□□□ 0.58
CMTM3-214ENST00000567572 GSTA5Q7RTV2 222 aa18.67■□□□□ 0.58
CMTM3-214ENST00000567572 TDRPQ86YL5 185 aa18.67■□□□□ 0.58
CMTM3-214ENST00000567572 TMEM192Q8IY95 271 aa18.67■□□□□ 0.58
CMTM3-214ENST00000567572 GBP7Q8N8V2 638 aaPredicted RBP18.67■□□□□ 0.58
CMTM3-214ENST00000567572 NLRP7Q8WX94 980 aa18.67■□□□□ 0.58
CMTM3-214ENST00000567572 SETD4Q9NVD3 440 aa18.67■□□□□ 0.58
CMTM3-214ENST00000567572 EURLQ9NYK6 297 aa18.67■□□□□ 0.58
CMTM3-214ENST00000567572 MGAMO43451 1857 aa18.67■□□□□ 0.58
CMTM3-214ENST00000567572 O00370 1275 aa18.66■□□□□ 0.58
CMTM3-214ENST00000567572 DNM1LO00429 736 aa18.66■□□□□ 0.58
CMTM3-214ENST00000567572 TSPAN1O60635 241 aa18.66■□□□□ 0.58
CMTM3-214ENST00000567572 SMIM10L2AP0DMW4 78 aa18.66■□□□□ 0.58
CMTM3-214ENST00000567572 SMIM10L2BP0DMW5 78 aa18.66■□□□□ 0.58
CMTM3-214ENST00000567572 CXCL8P10145 99 aa18.66■□□□□ 0.58
CMTM3-214ENST00000567572 CD58P19256 250 aa18.66■□□□□ 0.58
CMTM3-214ENST00000567572 CYP2B6P20813 491 aa18.66■□□□□ 0.58
CMTM3-214ENST00000567572 MORF4L2Q15014 288 aa18.66■□□□□ 0.58
CMTM3-214ENST00000567572 TRIP13Q15645 432 aaPredicted RBP18.66■□□□□ 0.58
CMTM3-214ENST00000567572 C2CD6Q53TS8 623 aa18.66■□□□□ 0.58
CMTM3-214ENST00000567572 SPOCD1Q6ZMY3 1216 aa18.66■□□□□ 0.58
CMTM3-214ENST00000567572 ALLCQ8N6M5 410 aa18.66■□□□□ 0.58
CMTM3-214ENST00000567572 FNIP1Q8TF40 1166 aa18.66■□□□□ 0.58
CMTM3-214ENST00000567572 CKAP2Q8WWK9 683 aa18.66■□□□□ 0.58
CMTM3-214ENST00000567572 SGSM3Q96HU1 749 aa18.66■□□□□ 0.58
CMTM3-214ENST00000567572 RPF1Q9H9Y2 349 aaKnown RBP18.66■□□□□ 0.58
CMTM3-214ENST00000567572 SLC40A1Q9NP59 571 aa18.66■□□□□ 0.58
CMTM3-214ENST00000567572 CISHQ9NSE2 258 aa18.66■□□□□ 0.58
CMTM3-214ENST00000567572 SLC12A4Q9UP95 1085 aa18.66■□□□□ 0.58
CMTM3-214ENST00000567572 SHOC2Q9UQ13 582 aa18.66■□□□□ 0.58
CMTM3-214ENST00000567572 USTQ9Y2C2 406 aa18.66■□□□□ 0.58
CMTM3-214ENST00000567572 NRCAMQ92823 1304 aa18.66■□□□□ 0.58
CMTM3-214ENST00000567572 SNX3O60493 162 aa18.66■□□□□ 0.58
CMTM3-214ENST00000567572 ITGAVP06756 1048 aa18.66■□□□□ 0.58
CMTM3-214ENST00000567572 POLR2BP30876 1174 aaKnown RBP18.66■□□□□ 0.58
CMTM3-214ENST00000567572 SSR1P43307 286 aaKnown RBP18.66■□□□□ 0.58
CMTM3-214ENST00000567572 SLC18A1P54219 525 aa18.66■□□□□ 0.58
CMTM3-214ENST00000567572 MYL6P60660 151 aa18.66■□□□□ 0.58
CMTM3-214ENST00000567572 TFAMQ00059 246 aaKnown RBP18.66■□□□□ 0.58
CMTM3-214ENST00000567572 TFDP3Q5H9I0 405 aa18.66■□□□□ 0.58
CMTM3-214ENST00000567572 DCUN1D2Q6PH85 259 aa18.66■□□□□ 0.58
CMTM3-214ENST00000567572 ANKS1BQ7Z6G8 1248 aa18.66■□□□□ 0.58
CMTM3-214ENST00000567572 PHLDB2Q86SQ0 1253 aa18.66■□□□□ 0.58
CMTM3-214ENST00000567572 CPB2Q96IY4 423 aa18.66■□□□□ 0.58
CMTM3-214ENST00000567572 LHX5Q9H2C1 402 aa18.66■□□□□ 0.58
CMTM3-214ENST00000567572 KLC4Q9NSK0 619 aa18.66■□□□□ 0.58
CMTM3-214ENST00000567572 SENP1Q9P0U3 644 aa18.66■□□□□ 0.58
CMTM3-214ENST00000567572 KAT6AQ92794 2004 aa18.66■□□□□ 0.58
CMTM3-214ENST00000567572 hCG_1818297A0A087WSY0 165 aa18.65■□□□□ 0.58
CMTM3-214ENST00000567572 MBLAC1A4D2B0 266 aaPredicted RBP18.65■□□□□ 0.58
CMTM3-214ENST00000567572 TNPO2O14787 897 aaKnown RBP18.65■□□□□ 0.58
CMTM3-214ENST00000567572 MED7O43513 233 aa18.65■□□□□ 0.58
CMTM3-214ENST00000567572 STAG3L1P0CL83 205 aa18.65■□□□□ 0.58
CMTM3-214ENST00000567572 VCPP55072 806 aaKnown RBP18.65■□□□□ 0.58
CMTM3-214ENST00000567572 TRPC3Q13507 836 aa18.65■□□□□ 0.58
CMTM3-214ENST00000567572 LLGL1Q15334 1064 aa18.65■□□□□ 0.58
CMTM3-214ENST00000567572 P3H1Q32P28 736 aa18.65■□□□□ 0.58
CMTM3-214ENST00000567572 RBM15Q96T37 977 aaKnown RBP eCLIP18.65■□□□□ 0.58
CMTM3-214ENST00000567572 XYLT2Q9H1B5 865 aa18.65■□□□□ 0.58
CMTM3-214ENST00000567572 ADAMTS10Q9H324 1103 aa18.65■□□□□ 0.58
CMTM3-214ENST00000567572 PCDH9Q9HC56 1237 aa18.65■□□□□ 0.58
CMTM3-214ENST00000567572 Q9Y3F1 56 aa18.65■□□□□ 0.58
CMTM3-214ENST00000567572 TNNC2P02585 160 aa18.64■□□□□ 0.58
CMTM3-214ENST00000567572 BRAFP15056 766 aa18.64■□□□□ 0.58
CMTM3-214ENST00000567572 RDXP35241 583 aaKnown RBP18.64■□□□□ 0.58
CMTM3-214ENST00000567572 MAGEA4P43358 317 aa18.64■□□□□ 0.58
CMTM3-214ENST00000567572 RPL7AP62424 266 aaKnown RBP18.64■□□□□ 0.58
CMTM3-214ENST00000567572 ZNF252P-AS1Q0IIN9 211 aa18.64■□□□□ 0.58
CMTM3-214ENST00000567572 OASLQ15646 514 aaKnown RBP18.64■□□□□ 0.58
CMTM3-214ENST00000567572 CCDC38Q502W7 563 aa18.64■□□□□ 0.58
CMTM3-214ENST00000567572 TRPM8Q7Z2W7 1104 aa18.64■□□□□ 0.58
CMTM3-214ENST00000567572 PCGF5Q86SE9 256 aa18.64■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms