RNA–Protein interactions for RNA: ENST00000567258.1

LINC00564-201, long intergenic non-protein coding RNA 564, humanhuman

BASIC

Gene LINC00564, Length 1,119 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00564-201ENST00000567258 SHKBP1Q8TBC3 707 aa11.14□□□□□ -0.63
LINC00564-201ENST00000567258 FNBP1Q96RU3 617 aa11.14□□□□□ -0.63
LINC00564-201ENST00000567258 TMEM209Q96SK2 561 aa11.14□□□□□ -0.63
LINC00564-201ENST00000567258 HINFPQ9BQA5 517 aa11.14□□□□□ -0.63
LINC00564-201ENST00000567258 CBWD1Q9BRT8 395 aa11.14□□□□□ -0.63
LINC00564-201ENST00000567258 DDX23Q9BUQ8 820 aaKnown RBP11.14□□□□□ -0.63
LINC00564-201ENST00000567258 TRIM9Q9C026 710 aa11.14□□□□□ -0.63
LINC00564-201ENST00000567258 PDE11AQ9HCR9 933 aa11.14□□□□□ -0.63
LINC00564-201ENST00000567258 THG1LQ9NWX6 298 aaKnown RBP11.14□□□□□ -0.63
LINC00564-201ENST00000567258 ZMYM5Q9UJ78 669 aa11.14□□□□□ -0.63
LINC00564-201ENST00000567258 SNX9Q9Y5X1 595 aa11.14□□□□□ -0.63
LINC00564-201ENST00000567258 OBSL1O75147 1896 aa11.14□□□□□ -0.63
LINC00564-201ENST00000567258 USP34Q70CQ2 3546 aa11.14□□□□□ -0.63
LINC00564-201ENST00000567258 UBE4BO95155 1302 aa11.13□□□□□ -0.63
LINC00564-201ENST00000567258 LOC100996750A0A140TA64 210 aa11.13□□□□□ -0.63
LINC00564-201ENST00000567258 PRR23AA6NEV1 266 aa11.13□□□□□ -0.63
LINC00564-201ENST00000567258 HEPACAM2A8MVW5 462 aa11.13□□□□□ -0.63
LINC00564-201ENST00000567258 PRPF40AO75400 957 aaKnown RBP11.13□□□□□ -0.63
LINC00564-201ENST00000567258 SOAT2O75908 522 aa11.13□□□□□ -0.63
LINC00564-201ENST00000567258 CLSTN1O94985 981 aa11.13□□□□□ -0.63
LINC00564-201ENST00000567258 GLULP15104 373 aa11.13□□□□□ -0.63
LINC00564-201ENST00000567258 TNNI1P19237 187 aa11.13□□□□□ -0.63
LINC00564-201ENST00000567258 FCARP24071 287 aa11.13□□□□□ -0.63
LINC00564-201ENST00000567258 PCSK1P29120 753 aa11.13□□□□□ -0.63
LINC00564-201ENST00000567258 LHX1P48742 406 aa11.13□□□□□ -0.63
LINC00564-201ENST00000567258 KPNA1P52294 538 aaPredicted RBP11.13□□□□□ -0.63
LINC00564-201ENST00000567258 SNRPFP62306 86 aaKnown RBP11.13□□□□□ -0.63
LINC00564-201ENST00000567258 RPL10AP62906 217 aaKnown RBP11.13□□□□□ -0.63
LINC00564-201ENST00000567258 DUOXA2Q1HG44 320 aa11.13□□□□□ -0.63
LINC00564-201ENST00000567258 VITQ6UXI7 678 aa11.13□□□□□ -0.63
LINC00564-201ENST00000567258 TRIM46Q7Z4K8 759 aa11.13□□□□□ -0.63
LINC00564-201ENST00000567258 ARID3BQ8IVW6 561 aaPredicted RBP11.13□□□□□ -0.63
LINC00564-201ENST00000567258 C1orf127Q8N9H9 656 aa11.13□□□□□ -0.63
LINC00564-201ENST00000567258 SPATA18Q8TC71 538 aa11.13□□□□□ -0.63
LINC00564-201ENST00000567258 GIPC2Q8TF65 315 aa11.13□□□□□ -0.63
LINC00564-201ENST00000567258 FAM3CQ92520 227 aa11.13□□□□□ -0.63
LINC00564-201ENST00000567258 BORCS6Q96GS4 357 aa11.13□□□□□ -0.63
LINC00564-201ENST00000567258 ZSWIM3Q96MP5 696 aa11.13□□□□□ -0.63
LINC00564-201ENST00000567258 C7orf25Q9BPX7 421 aa11.13□□□□□ -0.63
LINC00564-201ENST00000567258 ACBD6Q9BR61 282 aa11.13□□□□□ -0.63
LINC00564-201ENST00000567258 KRTAP4-6Q9BYQ5 205 aa11.13□□□□□ -0.63
LINC00564-201ENST00000567258 MTMR12Q9C0I1 747 aa11.13□□□□□ -0.63
LINC00564-201ENST00000567258 DNAJC25Q9H1X3 360 aa11.13□□□□□ -0.63
LINC00564-201ENST00000567258 CRISPLD1Q9H336 500 aa11.13□□□□□ -0.63
LINC00564-201ENST00000567258 TRPV4Q9HBA0 871 aa11.13□□□□□ -0.63
LINC00564-201ENST00000567258 ZNF334Q9HCZ1 680 aaPredicted RBP11.13□□□□□ -0.63
LINC00564-201ENST00000567258 TRPV5Q9NQA5 729 aa11.13□□□□□ -0.63
LINC00564-201ENST00000567258 DDX43Q9NXZ2 648 aaKnown RBP11.13□□□□□ -0.63
LINC00564-201ENST00000567258 HSPBP1Q9NZL4 362 aa11.13□□□□□ -0.63
LINC00564-201ENST00000567258 UXTQ9UBK9 157 aaPredicted RBP11.13□□□□□ -0.63
LINC00564-201ENST00000567258 NDRG2Q9UN36 371 aaKnown RBP11.13□□□□□ -0.63
LINC00564-201ENST00000567258 FAM186AA6NE01 2351 aa11.13□□□□□ -0.63
LINC00564-201ENST00000567258 CHADO15335 359 aa11.12□□□□□ -0.63
LINC00564-201ENST00000567258 SIAH2O43255 324 aa11.12□□□□□ -0.63
LINC00564-201ENST00000567258 KINO60870 393 aaKnown RBP11.12□□□□□ -0.63
LINC00564-201ENST00000567258 LRRN2O75325 713 aa11.12□□□□□ -0.63
LINC00564-201ENST00000567258 MOSPD3O75425 235 aa11.12□□□□□ -0.63
LINC00564-201ENST00000567258 VNN2O95498 520 aa11.12□□□□□ -0.63
LINC00564-201ENST00000567258 LMNAP02545 664 aaKnown RBP11.12□□□□□ -0.63
LINC00564-201ENST00000567258 SP9P0CG40 484 aa11.12□□□□□ -0.63
LINC00564-201ENST00000567258 CSH1P0DML2 217 aa11.12□□□□□ -0.63
LINC00564-201ENST00000567258 CSH2P0DML3 217 aa11.12□□□□□ -0.63
LINC00564-201ENST00000567258 HAPLN1P10915 354 aaPredicted RBP11.12□□□□□ -0.63
LINC00564-201ENST00000567258 LORP23490 312 aaPredicted RBP11.12□□□□□ -0.63
LINC00564-201ENST00000567258 AVPR1AP37288 418 aa11.12□□□□□ -0.63
LINC00564-201ENST00000567258 AFMP43652 599 aa11.12□□□□□ -0.63
LINC00564-201ENST00000567258 RPS9P46781 194 aaKnown RBP11.12□□□□□ -0.63
LINC00564-201ENST00000567258 CDR1P51861 262 aa11.12□□□□□ -0.63
LINC00564-201ENST00000567258 USP46P62068 366 aa11.12□□□□□ -0.63
LINC00564-201ENST00000567258 ARHGAP29Q52LW3 1261 aa11.12□□□□□ -0.63
LINC00564-201ENST00000567258 SHC4Q6S5L8 630 aa11.12□□□□□ -0.63
LINC00564-201ENST00000567258 UNC13DQ70J99 1090 aa11.12□□□□□ -0.63
LINC00564-201ENST00000567258 ASCL5Q7RTU5 278 aa11.12□□□□□ -0.63
LINC00564-201ENST00000567258 TMC8Q8IU68 726 aa11.12□□□□□ -0.63
LINC00564-201ENST00000567258 SPATA2LQ8IUW3 424 aaPredicted RBP11.12□□□□□ -0.63
LINC00564-201ENST00000567258 NELFCDQ8IXH7 590 aa11.12□□□□□ -0.63
LINC00564-201ENST00000567258 ADGRF2Q8IZF7 708 aa11.12□□□□□ -0.63
LINC00564-201ENST00000567258 ADSSL1Q8N142 457 aa11.12□□□□□ -0.63
LINC00564-201ENST00000567258 PDCL2Q8N4E4 241 aa11.12□□□□□ -0.63
LINC00564-201ENST00000567258 TTC9BQ8N6N2 239 aa11.12□□□□□ -0.63
LINC00564-201ENST00000567258 TOP6BLQ8N6T0 577 aa11.12□□□□□ -0.63
LINC00564-201ENST00000567258 ZSWIM2Q8NEG5 633 aa11.12□□□□□ -0.63
LINC00564-201ENST00000567258 ZNF507Q8TCN5 953 aa11.12□□□□□ -0.63
LINC00564-201ENST00000567258 ATRIPQ8WXE1 791 aa11.12□□□□□ -0.63
LINC00564-201ENST00000567258 CCDC47Q96A33 483 aaKnown RBP11.12□□□□□ -0.63
LINC00564-201ENST00000567258 MSANTD3Q96H12 275 aa11.12□□□□□ -0.63
LINC00564-201ENST00000567258 HPDLQ96IR7 371 aa11.12□□□□□ -0.63
LINC00564-201ENST00000567258 MMS19Q96T76 1030 aa11.12□□□□□ -0.63
LINC00564-201ENST00000567258 LPIN3Q9BQK8 851 aa11.12□□□□□ -0.63
LINC00564-201ENST00000567258 PI4K2AQ9BTU6 479 aa11.12□□□□□ -0.63
LINC00564-201ENST00000567258 FGFBP2Q9BYJ0 223 aa11.12□□□□□ -0.63
LINC00564-201ENST00000567258 TASP1Q9H6P5 420 aa11.12□□□□□ -0.63
LINC00564-201ENST00000567258 C8orf33Q9H7E9 229 aaPredicted RBP11.12□□□□□ -0.63
LINC00564-201ENST00000567258 INTS13Q9NVM9 706 aa11.12□□□□□ -0.63
LINC00564-201ENST00000567258 GDAP2Q9NXN4 497 aa11.12□□□□□ -0.63
LINC00564-201ENST00000567258 DLGAP2Q9P1A6 1054 aa11.12□□□□□ -0.63
LINC00564-201ENST00000567258 CGNQ9P2M7 1197 aaKnown RBP11.12□□□□□ -0.63
LINC00564-201ENST00000567258 FBXO4Q9UKT5 387 aa11.12□□□□□ -0.63
LINC00564-201ENST00000567258 PCDHA7Q9UN72 937 aa11.12□□□□□ -0.63
LINC00564-201ENST00000567258 MAGED2Q9UNF1 606 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms