RNA–Protein interactions for RNA: ENST00000566307.1

LSM3P5-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 5, humanhuman

BASIC

Gene LSM3P5, Length 306 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P5-201ENST00000566307 APPL2Q8NEU8 664 aa9.37□□□□□ -0.91
LSM3P5-201ENST00000566307 TNIP3Q96KP6 325 aa9.37□□□□□ -0.91
LSM3P5-201ENST00000566307 PNKPQ96T60 521 aa9.37□□□□□ -0.91
LSM3P5-201ENST00000566307 PSMB7Q99436 277 aa9.37□□□□□ -0.91
LSM3P5-201ENST00000566307 NCAPGQ9BPX3 1015 aa9.37□□□□□ -0.91
LSM3P5-201ENST00000566307 APOL6Q9BWW8 343 aa9.37□□□□□ -0.91
LSM3P5-201ENST00000566307 SLC4A5Q9BY07 1137 aa9.37□□□□□ -0.91
LSM3P5-201ENST00000566307 ELAC1Q9H777 363 aaKnown RBP9.37□□□□□ -0.91
LSM3P5-201ENST00000566307 RSAD1Q9HA92 442 aa9.37□□□□□ -0.91
LSM3P5-201ENST00000566307 ARFGAP3Q9NP61 516 aa9.37□□□□□ -0.91
LSM3P5-201ENST00000566307 TRMT13Q9NUP7 481 aaKnown RBP9.37□□□□□ -0.91
LSM3P5-201ENST00000566307 STIM2Q9P246 746 aa9.37□□□□□ -0.91
LSM3P5-201ENST00000566307 OGDHLQ9ULD0 1010 aa9.37□□□□□ -0.91
LSM3P5-201ENST00000566307 L1RE1Q9UN81 338 aa9.37□□□□□ -0.91
LSM3P5-201ENST00000566307 PTPN22Q9Y2R2 807 aa9.37□□□□□ -0.91
LSM3P5-201ENST00000566307 TRIM17Q9Y577 477 aa9.37□□□□□ -0.91
LSM3P5-201ENST00000566307 ARL5CA6NH57 179 aa9.36□□□□□ -0.91
LSM3P5-201ENST00000566307 C9IYK1 514 aa9.36□□□□□ -0.91
LSM3P5-201ENST00000566307 SPTLC1O15269 473 aa9.36□□□□□ -0.91
LSM3P5-201ENST00000566307 MGEA5O60502 916 aa9.36□□□□□ -0.91
LSM3P5-201ENST00000566307 FGGP02679 453 aa9.36□□□□□ -0.91
LSM3P5-201ENST00000566307 ERBB2P04626 1255 aa9.36□□□□□ -0.91
LSM3P5-201ENST00000566307 PFKMP08237 780 aa9.36□□□□□ -0.91
LSM3P5-201ENST00000566307 RHOXF2BP0C7M4 288 aa9.36□□□□□ -0.91
LSM3P5-201ENST00000566307 GHRP10912 638 aa9.36□□□□□ -0.91
LSM3P5-201ENST00000566307 SELPP16109 830 aa9.36□□□□□ -0.91
LSM3P5-201ENST00000566307 GNL1P36915 607 aaPredicted RBP9.36□□□□□ -0.91
LSM3P5-201ENST00000566307 ACADSBP45954 432 aa9.36□□□□□ -0.91
LSM3P5-201ENST00000566307 LHX1P48742 406 aa9.36□□□□□ -0.91
LSM3P5-201ENST00000566307 COPS2P61201 443 aa9.36□□□□□ -0.91
LSM3P5-201ENST00000566307 VSNL1P62760 191 aa9.36□□□□□ -0.91
LSM3P5-201ENST00000566307 DHX34Q14147 1143 aaKnown RBP9.36□□□□□ -0.91
LSM3P5-201ENST00000566307 BEND6Q5SZJ8 279 aaPredicted RBP9.36□□□□□ -0.91
LSM3P5-201ENST00000566307 C1orf53Q5VUE5 145 aa9.36□□□□□ -0.91
LSM3P5-201ENST00000566307 MAATS1Q7Z4T9 603 aa9.36□□□□□ -0.91
LSM3P5-201ENST00000566307 ECHDC2Q86YB7 292 aa9.36□□□□□ -0.91
LSM3P5-201ENST00000566307 SLC13A5Q86YT5 568 aaPredicted RBP9.36□□□□□ -0.91
LSM3P5-201ENST00000566307 FAM126BQ8IXS8 530 aa9.36□□□□□ -0.91
LSM3P5-201ENST00000566307 ANKRD52Q8NB46 1076 aa9.36□□□□□ -0.91
LSM3P5-201ENST00000566307 EXD1Q8NHP7 514 aa9.36□□□□□ -0.91
LSM3P5-201ENST00000566307 CCDC26Q8TAB7 109 aa9.36□□□□□ -0.91
LSM3P5-201ENST00000566307 SLC35F5Q8WV83 523 aa9.36□□□□□ -0.91
LSM3P5-201ENST00000566307 SEC14L1Q92503 715 aa9.36□□□□□ -0.91
LSM3P5-201ENST00000566307 KRT35Q92764 455 aa9.36□□□□□ -0.91
LSM3P5-201ENST00000566307 SLCO2A1Q92959 643 aa9.36□□□□□ -0.91
LSM3P5-201ENST00000566307 MS4A14Q96JA4 679 aa9.36□□□□□ -0.91
LSM3P5-201ENST00000566307 HSFY1Q96LI6 401 aa9.36□□□□□ -0.91
LSM3P5-201ENST00000566307 CPXM1Q96SM3 734 aa9.36□□□□□ -0.91
LSM3P5-201ENST00000566307 GAD1Q99259 594 aa9.36□□□□□ -0.91
LSM3P5-201ENST00000566307 HNRNPABQ99729 332 aaKnown RBP9.36□□□□□ -0.91
LSM3P5-201ENST00000566307 RHOXF2Q9BQY4 288 aa9.36□□□□□ -0.91
LSM3P5-201ENST00000566307 GDF3Q9NR23 364 aa9.36□□□□□ -0.91
LSM3P5-201ENST00000566307 EHD2Q9NZN4 543 aa9.36□□□□□ -0.91
LSM3P5-201ENST00000566307 KLK14Q9P0G3 267 aa9.36□□□□□ -0.91
LSM3P5-201ENST00000566307 HESX1Q9UBX0 185 aa9.36□□□□□ -0.91
LSM3P5-201ENST00000566307 CYTH4Q9UIA0 394 aa9.36□□□□□ -0.91
LSM3P5-201ENST00000566307 TSPAN16Q9UKR8 245 aa9.36□□□□□ -0.91
LSM3P5-201ENST00000566307 EFR3BQ9Y2G0 817 aa9.36□□□□□ -0.91
LSM3P5-201ENST00000566307 NME7Q9Y5B8 376 aa9.36□□□□□ -0.91
LSM3P5-201ENST00000566307 FAM187AA6NFU0 413 aa9.35□□□□□ -0.91
LSM3P5-201ENST00000566307 A8MXQ7 604 aa9.35□□□□□ -0.91
LSM3P5-201ENST00000566307 TMEM189-UBE2V1I3L0A0 370 aa9.35□□□□□ -0.91
LSM3P5-201ENST00000566307 M0QYV0 167 aa9.35□□□□□ -0.91
LSM3P5-201ENST00000566307 KRIT1O00522 736 aa9.35□□□□□ -0.91
LSM3P5-201ENST00000566307 PODXLO00592 558 aa9.35□□□□□ -0.91
LSM3P5-201ENST00000566307 SART1O43290 800 aaKnown RBP9.35□□□□□ -0.91
LSM3P5-201ENST00000566307 CYP11A1P05108 521 aa9.35□□□□□ -0.91
LSM3P5-201ENST00000566307 KRT3P12035 628 aa9.35□□□□□ -0.91
LSM3P5-201ENST00000566307 CHRNA3P32297 505 aa9.35□□□□□ -0.91
LSM3P5-201ENST00000566307 PCK1P35558 622 aa9.35□□□□□ -0.91
LSM3P5-201ENST00000566307 MLH1P40692 756 aa9.35□□□□□ -0.91
LSM3P5-201ENST00000566307 CETN2P41208 172 aa9.35□□□□□ -0.91
LSM3P5-201ENST00000566307 FNTAP49354 379 aa9.35□□□□□ -0.91
LSM3P5-201ENST00000566307 BCAT1P54687 386 aa9.35□□□□□ -0.91
LSM3P5-201ENST00000566307 BST2Q10589 180 aaKnown RBP9.35□□□□□ -0.91
LSM3P5-201ENST00000566307 NNTQ13423 1086 aa9.35□□□□□ -0.91
LSM3P5-201ENST00000566307 TUSC3Q13454 348 aa9.35□□□□□ -0.91
LSM3P5-201ENST00000566307 UPP1Q16831 310 aa9.35□□□□□ -0.91
LSM3P5-201ENST00000566307 LONRF2Q1L5Z9 754 aa9.35□□□□□ -0.91
LSM3P5-201ENST00000566307 PPP1R26Q5T8A7 1209 aaPredicted RBP9.35□□□□□ -0.91
LSM3P5-201ENST00000566307 DCUN1D2Q6PH85 259 aa9.35□□□□□ -0.91
LSM3P5-201ENST00000566307 CCNI2Q6ZMN8 369 aaPredicted RBP9.35□□□□□ -0.91
LSM3P5-201ENST00000566307 SLC24A5Q71RS6 500 aa9.35□□□□□ -0.91
LSM3P5-201ENST00000566307 VSIG1Q86XK7 387 aa9.35□□□□□ -0.91
LSM3P5-201ENST00000566307 IFT20Q8IY31 132 aa9.35□□□□□ -0.91
LSM3P5-201ENST00000566307 ADGRF2Q8IZF7 708 aa9.35□□□□□ -0.91
LSM3P5-201ENST00000566307 OR6B3Q8NGW1 331 aa9.35□□□□□ -0.91
LSM3P5-201ENST00000566307 APBB2Q92870 758 aa9.35□□□□□ -0.91
LSM3P5-201ENST00000566307 RBM41Q96IZ5 413 aaKnown RBP9.35□□□□□ -0.91
LSM3P5-201ENST00000566307 ZFP42Q96MM3 310 aa9.35□□□□□ -0.91
LSM3P5-201ENST00000566307 ADAM2Q99965 735 aa9.35□□□□□ -0.91
LSM3P5-201ENST00000566307 LRRC1Q9BTT6 524 aa9.35□□□□□ -0.91
LSM3P5-201ENST00000566307 FAM129AQ9BZQ8 928 aa9.35□□□□□ -0.91
LSM3P5-201ENST00000566307 UBXN6Q9BZV1 441 aa9.35□□□□□ -0.91
LSM3P5-201ENST00000566307 SNX25Q9H3E2 840 aa9.35□□□□□ -0.91
LSM3P5-201ENST00000566307 VIPAS39Q9H9C1 493 aa9.35□□□□□ -0.91
LSM3P5-201ENST00000566307 HOMER3Q9NSC5 361 aa9.35□□□□□ -0.91
LSM3P5-201ENST00000566307 DDX56Q9NY93 547 aaKnown RBP9.35□□□□□ -0.91
LSM3P5-201ENST00000566307 FAM53CQ9NYF3 392 aa9.35□□□□□ -0.91
LSM3P5-201ENST00000566307 KANSL3Q9P2N6 904 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms