RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 LMO2P25791 158 aa19.64■□□□□ 0.73
USB1-213ENST00000566292 PCSK1P29120 753 aa19.64■□□□□ 0.73
USB1-213ENST00000566292 CTHP32929 405 aa19.64■□□□□ 0.73
USB1-213ENST00000566292 AFMP43652 599 aa19.64■□□□□ 0.73
USB1-213ENST00000566292 CYP2J2P51589 502 aa19.64■□□□□ 0.73
USB1-213ENST00000566292 SNRNP35Q16560 246 aaKnown RBP19.64■□□□□ 0.73
USB1-213ENST00000566292 BMT2Q1RMZ1 405 aa19.64■□□□□ 0.73
USB1-213ENST00000566292 TXNDC8Q6A555 127 aa19.64■□□□□ 0.73
USB1-213ENST00000566292 ATL3Q6DD88 541 aa19.64■□□□□ 0.73
USB1-213ENST00000566292 FAM171BQ6P995 826 aa19.64■□□□□ 0.73
USB1-213ENST00000566292 TRAPPC11Q7Z392 1133 aa19.64■□□□□ 0.73
USB1-213ENST00000566292 GRAMD1CQ8IYS0 662 aa19.64■□□□□ 0.73
USB1-213ENST00000566292 CELF5Q8N6W0 485 aaKnown RBP19.64■□□□□ 0.73
USB1-213ENST00000566292 ATRIPQ8WXE1 791 aa19.64■□□□□ 0.73
USB1-213ENST00000566292 IER2Q9BTL4 223 aa19.64■□□□□ 0.73
USB1-213ENST00000566292 SLC39A2Q9NP94 309 aa19.64■□□□□ 0.73
USB1-213ENST00000566292 RBM12Q9NTZ6 932 aaKnown RBP19.64■□□□□ 0.73
USB1-213ENST00000566292 FAM13BQ9NYF5 915 aa19.64■□□□□ 0.73
USB1-213ENST00000566292 ZMYM5Q9UJ78 669 aa19.64■□□□□ 0.73
USB1-213ENST00000566292 CCL26Q9Y258 94 aa19.64■□□□□ 0.73
USB1-213ENST00000566292 R3HCC1Q9Y3T6 440 aaKnown RBP19.64■□□□□ 0.73
USB1-213ENST00000566292 HELZP42694 1942 aaKnown RBP19.63■□□□□ 0.73
USB1-213ENST00000566292 NOL4O94818 638 aa19.63■□□□□ 0.73
USB1-213ENST00000566292 DLATP10515 647 aaKnown RBP19.63■□□□□ 0.73
USB1-213ENST00000566292 DDX6P26196 483 aaKnown RBP eCLIP19.63■□□□□ 0.73
USB1-213ENST00000566292 RPL10AP62906 217 aaKnown RBP19.63■□□□□ 0.73
USB1-213ENST00000566292 PLCB2Q00722 1185 aa19.63■□□□□ 0.73
USB1-213ENST00000566292 CYP24A1Q07973 514 aa19.63■□□□□ 0.73
USB1-213ENST00000566292 PSMD6Q15008 389 aa19.63■□□□□ 0.73
USB1-213ENST00000566292 CFAP221Q4G0U5 840 aa19.63■□□□□ 0.73
USB1-213ENST00000566292 C1orf228Q6PIY5 440 aa19.63■□□□□ 0.73
USB1-213ENST00000566292 RALGPS2Q86X27 583 aaPredicted RBP19.63■□□□□ 0.73
USB1-213ENST00000566292 SPATA2LQ8IUW3 424 aaPredicted RBP19.63■□□□□ 0.73
USB1-213ENST00000566292 DCLK2Q8N568 766 aa19.63■□□□□ 0.73
USB1-213ENST00000566292 XXYLT1Q8NBI6 393 aa19.63■□□□□ 0.73
USB1-213ENST00000566292 RIN3Q8TB24 985 aa19.63■□□□□ 0.73
USB1-213ENST00000566292 USP13Q92995 863 aaPredicted RBP19.63■□□□□ 0.73
USB1-213ENST00000566292 CGRRF1Q99675 332 aa19.63■□□□□ 0.73
USB1-213ENST00000566292 GZF1Q9H116 711 aaPredicted RBP19.63■□□□□ 0.73
USB1-213ENST00000566292 CRTAC1Q9NQ79 661 aa19.63■□□□□ 0.73
USB1-213ENST00000566292 RCOR1Q9UKL0 485 aa19.63■□□□□ 0.73
USB1-213ENST00000566292 PVALEFA0A1B0GWK0 134 aa19.62■□□□□ 0.73
USB1-213ENST00000566292 CST3P01034 146 aaPredicted RBP19.62■□□□□ 0.73
USB1-213ENST00000566292 TNNI1P19237 187 aa19.62■□□□□ 0.73
USB1-213ENST00000566292 AVPR1AP37288 418 aa19.62■□□□□ 0.73
USB1-213ENST00000566292 PSMC1P62191 440 aaKnown RBP19.62■□□□□ 0.73
USB1-213ENST00000566292 SNRPFP62306 86 aaKnown RBP19.62■□□□□ 0.73
USB1-213ENST00000566292 MON1AQ86VX9 555 aa19.62■□□□□ 0.73
USB1-213ENST00000566292 KIAA2013Q8IYS2 634 aa19.62■□□□□ 0.73
USB1-213ENST00000566292 RUBCNQ92622 972 aa19.62■□□□□ 0.73
USB1-213ENST00000566292 MRPS31Q92665 395 aaKnown RBP19.62■□□□□ 0.73
USB1-213ENST00000566292 TRMT2BQ96GJ1 504 aaKnown RBP19.62■□□□□ 0.73
USB1-213ENST00000566292 FUBP3Q96I24 572 aaKnown RBP eCLIP19.62■□□□□ 0.73
USB1-213ENST00000566292 MYRFLQ96LU7 910 aa19.62■□□□□ 0.73
USB1-213ENST00000566292 SYT15Q9BQS2 421 aa19.62■□□□□ 0.73
USB1-213ENST00000566292 SERTAD1Q9UHV2 236 aa19.62■□□□□ 0.73
USB1-213ENST00000566292 CFAP45Q9UL16 551 aa19.62■□□□□ 0.73
USB1-213ENST00000566292 CDH9Q9ULB4 789 aa19.62■□□□□ 0.73
USB1-213ENST00000566292 NME7Q9Y5B8 376 aa19.62■□□□□ 0.73
USB1-213ENST00000566292 ATG2BQ96BY7 2078 aa19.61■□□□□ 0.73
USB1-213ENST00000566292 ACTN4O43707 911 aaKnown RBP19.61■□□□□ 0.73
USB1-213ENST00000566292 KLRC4O43908 158 aa19.61■□□□□ 0.73
USB1-213ENST00000566292 WARSP23381 471 aaKnown RBP19.61■□□□□ 0.73
USB1-213ENST00000566292 CCR3P51677 355 aa19.61■□□□□ 0.73
USB1-213ENST00000566292 SATB1Q01826 763 aa19.61■□□□□ 0.73
USB1-213ENST00000566292 PON2Q15165 354 aa19.61■□□□□ 0.73
USB1-213ENST00000566292 Q6ZS52 159 aa19.61■□□□□ 0.73
USB1-213ENST00000566292 HS2ST1Q7LGA3 356 aa19.61■□□□□ 0.73
USB1-213ENST00000566292 SCN4BQ8IWT1 228 aa19.61■□□□□ 0.73
USB1-213ENST00000566292 C12orf56Q8IXR9 622 aa19.61■□□□□ 0.73
USB1-213ENST00000566292 ZNF516Q92618 1163 aa19.61■□□□□ 0.73
USB1-213ENST00000566292 MYLPFQ96A32 169 aa19.61■□□□□ 0.73
USB1-213ENST00000566292 CCDC127Q96BQ5 260 aa19.61■□□□□ 0.73
USB1-213ENST00000566292 FNBP1Q96RU3 617 aa19.61■□□□□ 0.73
USB1-213ENST00000566292 HINFPQ9BQA5 517 aa19.61■□□□□ 0.73
USB1-213ENST00000566292 FAM83CQ9BQN1 747 aa19.61■□□□□ 0.73
USB1-213ENST00000566292 FAM126AQ9BYI3 521 aaPredicted RBP19.61■□□□□ 0.73
USB1-213ENST00000566292 EPC1Q9H2F5 836 aa19.61■□□□□ 0.73
USB1-213ENST00000566292 HPS4Q9NQG7 708 aa19.61■□□□□ 0.73
USB1-213ENST00000566292 GKN1Q9NS71 199 aa19.61■□□□□ 0.73
USB1-213ENST00000566292 TDP1Q9NUW8 608 aa19.61■□□□□ 0.73
USB1-213ENST00000566292 THG1LQ9NWX6 298 aaKnown RBP19.61■□□□□ 0.73
USB1-213ENST00000566292 UXTQ9UBK9 157 aaPredicted RBP19.61■□□□□ 0.73
USB1-213ENST00000566292 CEP250Q9BV73 2442 aa19.61■□□□□ 0.73
USB1-213ENST00000566292 SOBPA7XYQ1 873 aa19.6■□□□□ 0.73
USB1-213ENST00000566292 PDGFRBP09619 1106 aa19.6■□□□□ 0.73
USB1-213ENST00000566292 MAGEA11P43364 429 aa19.6■□□□□ 0.73
USB1-213ENST00000566292 LRRC32Q14392 662 aa19.6■□□□□ 0.73
USB1-213ENST00000566292 KNOP1Q1ED39 458 aaKnown RBP19.6■□□□□ 0.73
USB1-213ENST00000566292 ITPRIPL2Q3MIP1 535 aa19.6■□□□□ 0.73
USB1-213ENST00000566292 TRIM68Q6AZZ1 485 aa19.6■□□□□ 0.73
USB1-213ENST00000566292 C4orf50Q6ZRC1 276 aa19.6■□□□□ 0.73
USB1-213ENST00000566292 SPEM1Q8N4L4 309 aa19.6■□□□□ 0.73
USB1-213ENST00000566292 MMS19Q96T76 1030 aa19.6■□□□□ 0.73
USB1-213ENST00000566292 MRPL45Q9BRJ2 306 aaKnown RBP19.6■□□□□ 0.73
USB1-213ENST00000566292 KIF9Q9HAQ2 790 aa19.6■□□□□ 0.73
USB1-213ENST00000566292 MAGEC2Q9UBF1 373 aaPredicted RBP19.6■□□□□ 0.73
USB1-213ENST00000566292 OTOL1A6NHN0 477 aaPredicted RBP19.59■□□□□ 0.73
USB1-213ENST00000566292 SLFN14P0C7P3 912 aa19.59■□□□□ 0.73
USB1-213ENST00000566292 ID4P47928 161 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms