RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 SATB1Q01826 763 aa5.87□□□□□ -1.47
CNOT1-209ENST00000566240 KRT17Q04695 432 aa5.87□□□□□ -1.47
CNOT1-209ENST00000566240 TBX2Q13207 712 aaPredicted RBP5.87□□□□□ -1.47
CNOT1-209ENST00000566240 SURF1Q15526 300 aa5.87□□□□□ -1.47
CNOT1-209ENST00000566240 TAPT1Q6NXT6 567 aa5.87□□□□□ -1.47
CNOT1-209ENST00000566240 CLEC4GQ6UXB4 293 aa5.87□□□□□ -1.47
CNOT1-209ENST00000566240 KCTD20Q7Z5Y7 419 aa5.87□□□□□ -1.47
CNOT1-209ENST00000566240 MOGAT3Q86VF5 341 aa5.87□□□□□ -1.47
CNOT1-209ENST00000566240 ZNF280BQ86YH2 543 aa5.87□□□□□ -1.47
CNOT1-209ENST00000566240 GATAD2AQ86YP4 633 aa5.87□□□□□ -1.47
CNOT1-209ENST00000566240 SYT12Q8IV01 421 aa5.87□□□□□ -1.47
CNOT1-209ENST00000566240 MB21D1Q8N884 522 aa5.87□□□□□ -1.47
CNOT1-209ENST00000566240 RUBCNQ92622 972 aa5.87□□□□□ -1.47
CNOT1-209ENST00000566240 USP13Q92995 863 aaPredicted RBP5.87□□□□□ -1.47
CNOT1-209ENST00000566240 LRIG1Q96JA1 1093 aa5.87□□□□□ -1.47
CNOT1-209ENST00000566240 PNKPQ96T60 521 aa5.87□□□□□ -1.47
CNOT1-209ENST00000566240 FAM83DQ9H4H8 585 aa5.87□□□□□ -1.47
CNOT1-209ENST00000566240 ZBTB26Q9HCK0 441 aa5.87□□□□□ -1.47
CNOT1-209ENST00000566240 VSX1Q9NZR4 365 aaPredicted RBP5.87□□□□□ -1.47
CNOT1-209ENST00000566240 HERC5Q9UII4 1024 aaKnown RBP5.87□□□□□ -1.47
CNOT1-209ENST00000566240 RAD54BQ9Y620 910 aa5.87□□□□□ -1.47
CNOT1-209ENST00000566240 A0A1B0GVC2 190 aa5.86□□□□□ -1.47
CNOT1-209ENST00000566240 RRN3P2A6NIE6 340 aa5.86□□□□□ -1.47
CNOT1-209ENST00000566240 RRP9O43818 475 aaKnown RBP5.86□□□□□ -1.47
CNOT1-209ENST00000566240 NUAK1O60285 661 aa5.86□□□□□ -1.47
CNOT1-209ENST00000566240 ITGA2BP08514 1039 aa5.86□□□□□ -1.47
CNOT1-209ENST00000566240 PECAM1P16284 738 aaPredicted RBP5.86□□□□□ -1.47
CNOT1-209ENST00000566240 NPPBP16860 134 aa5.86□□□□□ -1.47
CNOT1-209ENST00000566240 CHRM3P20309 590 aa5.86□□□□□ -1.47
CNOT1-209ENST00000566240 DDIT3P35638 169 aa5.86□□□□□ -1.47
CNOT1-209ENST00000566240 RAP1GAPP47736 663 aa5.86□□□□□ -1.47
CNOT1-209ENST00000566240 LILRA4P59901 499 aa5.86□□□□□ -1.47
CNOT1-209ENST00000566240 KCNAB1Q14722 419 aa5.86□□□□□ -1.47
CNOT1-209ENST00000566240 PKN1Q16512 942 aa5.86□□□□□ -1.47
CNOT1-209ENST00000566240 SLC5A9Q2M3M2 681 aa5.86□□□□□ -1.47
CNOT1-209ENST00000566240 ZNF750Q32MQ0 723 aa5.86□□□□□ -1.47
CNOT1-209ENST00000566240 ZIK1Q3SY52 487 aaPredicted RBP5.86□□□□□ -1.47
CNOT1-209ENST00000566240 FAXCQ5TGI0 409 aa5.86□□□□□ -1.47
CNOT1-209ENST00000566240 WDR78Q5VTH9 848 aa5.86□□□□□ -1.47
CNOT1-209ENST00000566240 TSHZ3Q63HK5 1081 aa5.86□□□□□ -1.47
CNOT1-209ENST00000566240 METRNLQ641Q3 311 aa5.86□□□□□ -1.47
CNOT1-209ENST00000566240 SLFN13Q68D06 897 aa5.86□□□□□ -1.47
CNOT1-209ENST00000566240 MRNIPQ6NTE8 343 aa5.86□□□□□ -1.47
CNOT1-209ENST00000566240 TAF2Q6P1X5 1199 aa5.86□□□□□ -1.47
CNOT1-209ENST00000566240 KLHL17Q6TDP4 642 aa5.86□□□□□ -1.47
CNOT1-209ENST00000566240 LAYNQ6UX15 382 aa5.86□□□□□ -1.47
CNOT1-209ENST00000566240 PSD4Q8NDX1 1056 aa5.86□□□□□ -1.47
CNOT1-209ENST00000566240 POC1BQ8TC44 478 aa5.86□□□□□ -1.47
CNOT1-209ENST00000566240 GNRHR2Q96P88 292 aa5.86□□□□□ -1.47
CNOT1-209ENST00000566240 SENP7Q9BQF6 1050 aa5.86□□□□□ -1.47
CNOT1-209ENST00000566240 KRTAP4-11Q9BYQ6 195 aa5.86□□□□□ -1.47
CNOT1-209ENST00000566240 MEGF9Q9H1U4 602 aa5.86□□□□□ -1.47
CNOT1-209ENST00000566240 KIF17Q9P2E2 1029 aa5.86□□□□□ -1.47
CNOT1-209ENST00000566240 DNMT3BQ9UBC3 853 aaKnown RBP5.86□□□□□ -1.47
CNOT1-209ENST00000566240 SRP68Q9UHB9 627 aaKnown RBP5.86□□□□□ -1.47
CNOT1-209ENST00000566240 CDY1Q9Y6F8 540 aa5.86□□□□□ -1.47
CNOT1-209ENST00000566240 CCDC195A0A1B0GUA6 201 aa5.85□□□□□ -1.47
CNOT1-209ENST00000566240 FCHO1O14526 889 aa5.85□□□□□ -1.47
CNOT1-209ENST00000566240 EPB41L2O43491 1005 aaKnown RBP5.85□□□□□ -1.47
CNOT1-209ENST00000566240 PIAS2O75928 621 aa5.85□□□□□ -1.47
CNOT1-209ENST00000566240 USP1O94782 785 aa5.85□□□□□ -1.47
CNOT1-209ENST00000566240 RASAL1O95294 804 aa5.85□□□□□ -1.47
CNOT1-209ENST00000566240 GLP2RO95838 553 aa5.85□□□□□ -1.47
CNOT1-209ENST00000566240 LRPAP1P30533 357 aa5.85□□□□□ -1.47
CNOT1-209ENST00000566240 MSX2P35548 267 aaPredicted RBP5.85□□□□□ -1.47
CNOT1-209ENST00000566240 GCLCP48506 637 aaPredicted RBP5.85□□□□□ -1.47
CNOT1-209ENST00000566240 PXNP49023 591 aaPredicted RBP5.85□□□□□ -1.47
CNOT1-209ENST00000566240 ZNF134P52741 427 aa5.85□□□□□ -1.47
CNOT1-209ENST00000566240 NSUN2Q08J23 767 aaKnown RBP eCLIP5.85□□□□□ -1.47
CNOT1-209ENST00000566240 FOXL1Q12952 345 aa5.85□□□□□ -1.47
CNOT1-209ENST00000566240 TRIM71Q2Q1W2 868 aaKnown RBP5.85□□□□□ -1.47
CNOT1-209ENST00000566240 FBXO47Q5MNV8 452 aa5.85□□□□□ -1.47
CNOT1-209ENST00000566240 CACHD1Q5VU97 1274 aa5.85□□□□□ -1.47
CNOT1-209ENST00000566240 MZT2AQ6P582 158 aa5.85□□□□□ -1.47
CNOT1-209ENST00000566240 CCDC117Q8IWD4 279 aaPredicted RBP5.85□□□□□ -1.47
CNOT1-209ENST00000566240 RHOT2Q8IXI1 618 aa5.85□□□□□ -1.47
CNOT1-209ENST00000566240 D2HGDHQ8N465 521 aa5.85□□□□□ -1.47
CNOT1-209ENST00000566240 NAXEQ8NCW5 288 aa5.85□□□□□ -1.47
CNOT1-209ENST00000566240 BPIFB1Q8TDL5 484 aa5.85□□□□□ -1.47
CNOT1-209ENST00000566240 PPP2R3CQ969Q6 453 aa5.85□□□□□ -1.47
CNOT1-209ENST00000566240 PPM1MQ96MI6 270 aa5.85□□□□□ -1.47
CNOT1-209ENST00000566240 SLC46A2Q9BY10 475 aa5.85□□□□□ -1.47
CNOT1-209ENST00000566240 MLXIPQ9HAP2 919 aa5.85□□□□□ -1.47
CNOT1-209ENST00000566240 SAYSD1Q9NPB0 183 aa5.85□□□□□ -1.47
CNOT1-209ENST00000566240 CA14Q9ULX7 337 aa5.85□□□□□ -1.47
CNOT1-209ENST00000566240 MTO1Q9Y2Z2 717 aaKnown RBP5.85□□□□□ -1.47
CNOT1-209ENST00000566240 DTNAQ9Y4J8 743 aa5.85□□□□□ -1.47
CNOT1-209ENST00000566240 HS3ST4Q9Y661 456 aa5.85□□□□□ -1.47
CNOT1-209ENST00000566240 A0A0B4J269 797 aa5.84□□□□□ -1.47
CNOT1-209ENST00000566240 LEFTY2O00292 366 aa5.84□□□□□ -1.47
CNOT1-209ENST00000566240 LAMTOR5O43504 91 aa5.84□□□□□ -1.47
CNOT1-209ENST00000566240 SPATA31D3P0C874 917 aa5.84□□□□□ -1.47
CNOT1-209ENST00000566240 MST1P26927 711 aa5.84□□□□□ -1.47
CNOT1-209ENST00000566240 DGKEP52429 567 aa5.84□□□□□ -1.47
CNOT1-209ENST00000566240 LOXL3P58215 753 aa5.84□□□□□ -1.47
CNOT1-209ENST00000566240 NHLH2Q02577 135 aa5.84□□□□□ -1.47
CNOT1-209ENST00000566240 DDX10Q13206 875 aaKnown RBP5.84□□□□□ -1.47
CNOT1-209ENST00000566240 CNGB1Q14028 1251 aaPredicted RBP5.84□□□□□ -1.47
CNOT1-209ENST00000566240 SIM2Q14190 667 aaPredicted RBP5.84□□□□□ -1.47
CNOT1-209ENST00000566240 DCAF17Q5H9S7 520 aaPredicted RBP5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms