RNA–Protein interactions for RNA: ENST00000565370.1

SPG7-211, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 686 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-211ENST00000565370 LRRC3Q9BY71 257 aa13.13□□□□□ -0.31
SPG7-211ENST00000565370 ELOVL4Q9GZR5 314 aa13.13□□□□□ -0.31
SPG7-211ENST00000565370 DNAI2Q9GZS0 605 aa13.13□□□□□ -0.31
SPG7-211ENST00000565370 ZNF334Q9HCZ1 680 aaPredicted RBP13.13□□□□□ -0.31
SPG7-211ENST00000565370 EHD2Q9NZN4 543 aa13.13□□□□□ -0.31
SPG7-211ENST00000565370 MAGED2Q9UNF1 606 aaPredicted RBP13.13□□□□□ -0.31
SPG7-211ENST00000565370 PTPRDP23468 1912 aa13.12□□□□□ -0.31
SPG7-211ENST00000565370 KRBA1A5PL33 1030 aa13.12□□□□□ -0.31
SPG7-211ENST00000565370 SLC16A3O15427 465 aaKnown RBP13.12□□□□□ -0.31
SPG7-211ENST00000565370 HCRTO43612 131 aa13.12□□□□□ -0.31
SPG7-211ENST00000565370 MOSPD3O75425 235 aa13.12□□□□□ -0.31
SPG7-211ENST00000565370 AKAP3O75969 853 aa13.12□□□□□ -0.31
SPG7-211ENST00000565370 NOL4O94818 638 aa13.12□□□□□ -0.31
SPG7-211ENST00000565370 C4BPAP04003 597 aaKnown RBP13.12□□□□□ -0.31
SPG7-211ENST00000565370 PDGFRBP09619 1106 aa13.12□□□□□ -0.31
SPG7-211ENST00000565370 PSMC3P17980 439 aa13.12□□□□□ -0.31
SPG7-211ENST00000565370 CYP2F1P24903 491 aa13.12□□□□□ -0.31
SPG7-211ENST00000565370 AVPR1AP37288 418 aa13.12□□□□□ -0.31
SPG7-211ENST00000565370 CDR1P51861 262 aa13.12□□□□□ -0.31
SPG7-211ENST00000565370 DLG4P78352 724 aa13.12□□□□□ -0.31
SPG7-211ENST00000565370 CYP4F8P98187 520 aa13.12□□□□□ -0.31
SPG7-211ENST00000565370 LRRC63Q05C16 580 aa13.12□□□□□ -0.31
SPG7-211ENST00000565370 GRM2Q14416 872 aa13.12□□□□□ -0.31
SPG7-211ENST00000565370 SGSM1Q2NKQ1 1148 aa13.12□□□□□ -0.31
SPG7-211ENST00000565370 MDH1BQ5I0G3 518 aa13.12□□□□□ -0.31
SPG7-211ENST00000565370 SCARA3Q6AZY7 606 aa13.12□□□□□ -0.31
SPG7-211ENST00000565370 TANGO2Q6ICL3 276 aa13.12□□□□□ -0.31
SPG7-211ENST00000565370 FAM171BQ6P995 826 aa13.12□□□□□ -0.31
SPG7-211ENST00000565370 GAREM2Q75VX8 874 aa13.12□□□□□ -0.31
SPG7-211ENST00000565370 ELOA2Q8IYF1 753 aaPredicted RBP13.12□□□□□ -0.31
SPG7-211ENST00000565370 TMEM105Q8N8V8 129 aa13.12□□□□□ -0.31
SPG7-211ENST00000565370 B3GALNT2Q8NCR0 500 aa13.12□□□□□ -0.31
SPG7-211ENST00000565370 TRMT2BQ96GJ1 504 aaKnown RBP13.12□□□□□ -0.31
SPG7-211ENST00000565370 TNIP3Q96KP6 325 aa13.12□□□□□ -0.31
SPG7-211ENST00000565370 MRPL45Q9BRJ2 306 aaKnown RBP13.12□□□□□ -0.31
SPG7-211ENST00000565370 RPP25Q9BUL9 199 aaKnown RBP13.12□□□□□ -0.31
SPG7-211ENST00000565370 XYLT2Q9H1B5 865 aa13.12□□□□□ -0.31
SPG7-211ENST00000565370 TASP1Q9H6P5 420 aa13.12□□□□□ -0.31
SPG7-211ENST00000565370 SMYD3Q9H7B4 428 aa13.12□□□□□ -0.31
SPG7-211ENST00000565370 OBSL1O75147 1896 aa13.12□□□□□ -0.31
SPG7-211ENST00000565370 MIA3Q5JRA6 1907 aa13.11□□□□□ -0.31
SPG7-211ENST00000565370 MYBPHLA2RUH7 354 aa13.11□□□□□ -0.31
SPG7-211ENST00000565370 HEPACAM2A8MVW5 462 aa13.11□□□□□ -0.31
SPG7-211ENST00000565370 ZNF263O14978 683 aa13.11□□□□□ -0.31
SPG7-211ENST00000565370 GALR2O43603 387 aaPredicted RBP13.11□□□□□ -0.31
SPG7-211ENST00000565370 TRIM49P0CI25 452 aa13.11□□□□□ -0.31
SPG7-211ENST00000565370 TRIM49CP0CI26 452 aa13.11□□□□□ -0.31
SPG7-211ENST00000565370 GPR15P49685 360 aa13.11□□□□□ -0.31
SPG7-211ENST00000565370 MXI1P50539 228 aa13.11□□□□□ -0.31
SPG7-211ENST00000565370 DDR2Q16832 855 aa13.11□□□□□ -0.31
SPG7-211ENST00000565370 STXBP5Q5T5C0 1151 aa13.11□□□□□ -0.31
SPG7-211ENST00000565370 IER5LQ5T953 404 aa13.11□□□□□ -0.31
SPG7-211ENST00000565370 VITQ6UXI7 678 aa13.11□□□□□ -0.31
SPG7-211ENST00000565370 TPRG1Q6ZUI0 275 aa13.11□□□□□ -0.31
SPG7-211ENST00000565370 SV2AQ7L0J3 742 aa13.11□□□□□ -0.31
SPG7-211ENST00000565370 PJA1Q8NG27 643 aa13.11□□□□□ -0.31
SPG7-211ENST00000565370 SPATA20Q8TB22 786 aa13.11□□□□□ -0.31
SPG7-211ENST00000565370 MYCBPAPQ8TBZ2 947 aa13.11□□□□□ -0.31
SPG7-211ENST00000565370 PCED1BQ96HM7 432 aa13.11□□□□□ -0.31
SPG7-211ENST00000565370 MMRN2Q9H8L6 949 aa13.11□□□□□ -0.31
SPG7-211ENST00000565370 KIF9Q9HAQ2 790 aa13.11□□□□□ -0.31
SPG7-211ENST00000565370 TMEM8AQ9HCN3 771 aa13.11□□□□□ -0.31
SPG7-211ENST00000565370 CRTAC1Q9NQ79 661 aa13.11□□□□□ -0.31
SPG7-211ENST00000565370 OBP2AQ9NY56 170 aa13.11□□□□□ -0.31
SPG7-211ENST00000565370 MRPS17Q9Y2R5 130 aaKnown RBP13.11□□□□□ -0.31
SPG7-211ENST00000565370 PCDHA5Q9Y5H7 936 aa13.11□□□□□ -0.31
SPG7-211ENST00000565370 TICRRQ7Z2Z1 1910 aa13.1□□□□□ -0.31
SPG7-211ENST00000565370 SLC38A8A6NNN8 435 aa13.1□□□□□ -0.31
SPG7-211ENST00000565370 SOBPA7XYQ1 873 aa13.1□□□□□ -0.31
SPG7-211ENST00000565370 NRG2O14511 850 aaPredicted RBP13.1□□□□□ -0.31
SPG7-211ENST00000565370 ATP2C2O75185 946 aa13.1□□□□□ -0.31
SPG7-211ENST00000565370 VNN1O95497 513 aa13.1□□□□□ -0.31
SPG7-211ENST00000565370 ASS1P00966 412 aaKnown RBP13.1□□□□□ -0.31
SPG7-211ENST00000565370 HLA-DRAP01903 254 aa13.1□□□□□ -0.31
SPG7-211ENST00000565370 NPR3P17342 541 aa13.1□□□□□ -0.31
SPG7-211ENST00000565370 BDNFP23560 247 aa13.1□□□□□ -0.31
SPG7-211ENST00000565370 LMO2P25791 158 aa13.1□□□□□ -0.31
SPG7-211ENST00000565370 WEE1P30291 646 aa13.1□□□□□ -0.31
SPG7-211ENST00000565370 GDI1P31150 447 aa13.1□□□□□ -0.31
SPG7-211ENST00000565370 GTF2H1P32780 548 aa13.1□□□□□ -0.31
SPG7-211ENST00000565370 GRIK1P39086 918 aa13.1□□□□□ -0.31
SPG7-211ENST00000565370 PRCPP42785 496 aa13.1□□□□□ -0.31
SPG7-211ENST00000565370 RAP1GAPP47736 663 aa13.1□□□□□ -0.31
SPG7-211ENST00000565370 PDE6CP51160 858 aa13.1□□□□□ -0.31
SPG7-211ENST00000565370 NLRP12P59046 1061 aa13.1□□□□□ -0.31
SPG7-211ENST00000565370 STARD6P59095 220 aa13.1□□□□□ -0.31
SPG7-211ENST00000565370 UBE2HP62256 183 aa13.1□□□□□ -0.31
SPG7-211ENST00000565370 NOP14P78316 857 aaKnown RBP13.1□□□□□ -0.31
SPG7-211ENST00000565370 FKBP3Q00688 224 aaKnown RBP13.1□□□□□ -0.31
SPG7-211ENST00000565370 CCDC142Q17RM4 750 aa13.1□□□□□ -0.31
SPG7-211ENST00000565370 SLC44A4Q53GD3 710 aa13.1□□□□□ -0.31
SPG7-211ENST00000565370 DCAF17Q5H9S7 520 aaPredicted RBP13.1□□□□□ -0.31
SPG7-211ENST00000565370 SDHAF4Q5VUM1 108 aa13.1□□□□□ -0.31
SPG7-211ENST00000565370 TCERG1LQ5VWI1 586 aa13.1□□□□□ -0.31
SPG7-211ENST00000565370 KRT39Q6A163 491 aa13.1□□□□□ -0.31
SPG7-211ENST00000565370 C1orf228Q6PIY5 440 aa13.1□□□□□ -0.31
SPG7-211ENST00000565370 ARID3BQ8IVW6 561 aaPredicted RBP13.1□□□□□ -0.31
SPG7-211ENST00000565370 MFSD6LQ8IWD5 586 aa13.1□□□□□ -0.31
SPG7-211ENST00000565370 CSGALNACT1Q8TDX6 532 aa13.1□□□□□ -0.31
SPG7-211ENST00000565370 MSANTD3Q96H12 275 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms