RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 TRMT2BQ96GJ1 504 aaKnown RBP9.22□□□□□ -0.93
CAPN3-213ENST00000565173 INTS4Q96HW7 963 aaKnown RBP9.22□□□□□ -0.93
CAPN3-213ENST00000565173 SLC22A12Q96S37 553 aa9.22□□□□□ -0.93
CAPN3-213ENST00000565173 MTMR12Q9C0I1 747 aa9.22□□□□□ -0.93
CAPN3-213ENST00000565173 EBF3Q9H4W6 596 aa9.22□□□□□ -0.93
CAPN3-213ENST00000565173 INTS13Q9NVM9 706 aa9.22□□□□□ -0.93
CAPN3-213ENST00000565173 GMEB2Q9UKD1 530 aa9.22□□□□□ -0.93
CAPN3-213ENST00000565173 USP18Q9UMW8 372 aa9.22□□□□□ -0.93
CAPN3-213ENST00000565173 MAGED2Q9UNF1 606 aaPredicted RBP9.22□□□□□ -0.93
CAPN3-213ENST00000565173 SNX9Q9Y5X1 595 aa9.22□□□□□ -0.93
CAPN3-213ENST00000565173 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.22□□□□□ -0.93
CAPN3-213ENST00000565173 TCHHQ07283 1943 aa9.22□□□□□ -0.93
CAPN3-213ENST00000565173 OBSL1O75147 1896 aa9.21□□□□□ -0.93
CAPN3-213ENST00000565173 DCDC2BA2VCK2 349 aa9.21□□□□□ -0.94
CAPN3-213ENST00000565173 HUS1O60921 280 aa9.21□□□□□ -0.94
CAPN3-213ENST00000565173 ATP2C2O75185 946 aa9.21□□□□□ -0.94
CAPN3-213ENST00000565173 EGFP01133 1207 aa9.21□□□□□ -0.94
CAPN3-213ENST00000565173 KRT19P08727 400 aa9.21□□□□□ -0.94
CAPN3-213ENST00000565173 LMO2P25791 158 aa9.21□□□□□ -0.94
CAPN3-213ENST00000565173 STAT6P42226 847 aa9.21□□□□□ -0.94
CAPN3-213ENST00000565173 LHX1P48742 406 aa9.21□□□□□ -0.94
CAPN3-213ENST00000565173 GALK1P51570 392 aa9.21□□□□□ -0.94
CAPN3-213ENST00000565173 RBP5P82980 135 aa9.21□□□□□ -0.94
CAPN3-213ENST00000565173 BFSP1Q12934 665 aa9.21□□□□□ -0.94
CAPN3-213ENST00000565173 ZNF268Q14587 947 aaPredicted RBP9.21□□□□□ -0.94
CAPN3-213ENST00000565173 LMBRD2Q68DH5 695 aaPredicted RBP9.21□□□□□ -0.94
CAPN3-213ENST00000565173 NAIF1Q69YI7 327 aaPredicted RBP9.21□□□□□ -0.94
CAPN3-213ENST00000565173 DPH6Q7L8W6 267 aa9.21□□□□□ -0.94
CAPN3-213ENST00000565173 CBWD2Q8IUF1 395 aa9.21□□□□□ -0.94
CAPN3-213ENST00000565173 ADGRF2Q8IZF7 708 aa9.21□□□□□ -0.94
CAPN3-213ENST00000565173 GPD1LQ8N335 351 aa9.21□□□□□ -0.94
CAPN3-213ENST00000565173 FAM160A2Q8N612 972 aaPredicted RBP9.21□□□□□ -0.94
CAPN3-213ENST00000565173 PDILTQ8N807 584 aa9.21□□□□□ -0.94
CAPN3-213ENST00000565173 LINC00301Q8NCQ3 95 aa9.21□□□□□ -0.94
CAPN3-213ENST00000565173 KBTBD7Q8WVZ9 684 aa9.21□□□□□ -0.94
CAPN3-213ENST00000565173 MRPS31Q92665 395 aaKnown RBP9.21□□□□□ -0.94
CAPN3-213ENST00000565173 CYP2S1Q96SQ9 504 aa9.21□□□□□ -0.94
CAPN3-213ENST00000565173 RTKNQ9BST9 563 aa9.21□□□□□ -0.94
CAPN3-213ENST00000565173 ZSCAN16Q9H4T2 348 aaPredicted RBP9.21□□□□□ -0.94
CAPN3-213ENST00000565173 TMEM206Q9H813 350 aa9.21□□□□□ -0.94
CAPN3-213ENST00000565173 KIF9Q9HAQ2 790 aa9.21□□□□□ -0.94
CAPN3-213ENST00000565173 SEMA4GQ9NTN9 838 aa9.21□□□□□ -0.94
CAPN3-213ENST00000565173 KBTBD4Q9NVX7 518 aa9.21□□□□□ -0.94
CAPN3-213ENST00000565173 POLR3BQ9NW08 1133 aaPredicted RBP9.21□□□□□ -0.94
CAPN3-213ENST00000565173 GCNT4Q9P109 453 aa9.21□□□□□ -0.94
CAPN3-213ENST00000565173 CDV3Q9UKY7 258 aaKnown RBP9.21□□□□□ -0.94
CAPN3-213ENST00000565173 RAB23Q9ULC3 237 aa9.21□□□□□ -0.94
CAPN3-213ENST00000565173 CCDC163A0A0D9SF12 145 aa9.2□□□□□ -0.94
CAPN3-213ENST00000565173 ZNF233A6NK53 670 aa9.2□□□□□ -0.94
CAPN3-213ENST00000565173 TULP1O00294 542 aaPredicted RBP9.2□□□□□ -0.94
CAPN3-213ENST00000565173 KIAA0391O15091 583 aaKnown RBP9.2□□□□□ -0.94
CAPN3-213ENST00000565173 TGFB1I1O43294 461 aa9.2□□□□□ -0.94
CAPN3-213ENST00000565173 STX6O43752 255 aa9.2□□□□□ -0.94
CAPN3-213ENST00000565173 CST3P01034 146 aaPredicted RBP9.2□□□□□ -0.94
CAPN3-213ENST00000565173 GJA4P35212 333 aa9.2□□□□□ -0.94
CAPN3-213ENST00000565173 PXNP49023 591 aaPredicted RBP9.2□□□□□ -0.94
CAPN3-213ENST00000565173 RPL10AP62906 217 aaKnown RBP9.2□□□□□ -0.94
CAPN3-213ENST00000565173 ZXDBP98169 803 aa9.2□□□□□ -0.94
CAPN3-213ENST00000565173 MYL7Q01449 175 aa9.2□□□□□ -0.94
CAPN3-213ENST00000565173 FAM160A1Q05DH4 1040 aa9.2□□□□□ -0.94
CAPN3-213ENST00000565173 GRSF1Q12849 480 aaKnown RBP eCLIP9.2□□□□□ -0.94
CAPN3-213ENST00000565173 ZNF77Q15935 545 aa9.2□□□□□ -0.94
CAPN3-213ENST00000565173 CSRP2Q16527 193 aa9.2□□□□□ -0.94
CAPN3-213ENST00000565173 CNNM4Q6P4Q7 775 aa9.2□□□□□ -0.94
CAPN3-213ENST00000565173 EPM2AIP1Q7L775 607 aaPredicted RBP9.2□□□□□ -0.94
CAPN3-213ENST00000565173 SPATA2LQ8IUW3 424 aaPredicted RBP9.2□□□□□ -0.94
CAPN3-213ENST00000565173 CCDC65Q8IXS2 484 aa9.2□□□□□ -0.94
CAPN3-213ENST00000565173 ZNF507Q8TCN5 953 aa9.2□□□□□ -0.94
CAPN3-213ENST00000565173 OSCP1Q8WVF1 389 aa9.2□□□□□ -0.94
CAPN3-213ENST00000565173 EZH1Q92800 747 aaPredicted RBP9.2□□□□□ -0.94
CAPN3-213ENST00000565173 FUBP3Q96I24 572 aaKnown RBP eCLIP9.2□□□□□ -0.94
CAPN3-213ENST00000565173 HPDLQ96IR7 371 aa9.2□□□□□ -0.94
CAPN3-213ENST00000565173 TRIM9Q9C026 710 aa9.2□□□□□ -0.94
CAPN3-213ENST00000565173 GZF1Q9H116 711 aaPredicted RBP9.2□□□□□ -0.94
CAPN3-213ENST00000565173 TNMDQ9H2S6 317 aa9.2□□□□□ -0.94
CAPN3-213ENST00000565173 CRTAC1Q9NQ79 661 aa9.2□□□□□ -0.94
CAPN3-213ENST00000565173 HSPBP1Q9NZL4 362 aa9.2□□□□□ -0.94
CAPN3-213ENST00000565173 UXTQ9UBK9 157 aaPredicted RBP9.2□□□□□ -0.94
CAPN3-213ENST00000565173 NME7Q9Y5B8 376 aa9.2□□□□□ -0.94
CAPN3-213ENST00000565173 ASPMQ8IZT6 3477 aa9.19□□□□□ -0.94
CAPN3-213ENST00000565173 KMT2BQ9UMN6 2715 aaPredicted RBP9.19□□□□□ -0.94
CAPN3-213ENST00000565173 SPTBN2O15020 2390 aa9.19□□□□□ -0.94
CAPN3-213ENST00000565173 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.19□□□□□ -0.94
CAPN3-213ENST00000565173 C2orf78A6NCI8 922 aa9.19□□□□□ -0.94
CAPN3-213ENST00000565173 SLC30A4O14863 429 aa9.19□□□□□ -0.94
CAPN3-213ENST00000565173 GDF9O60383 454 aa9.19□□□□□ -0.94
CAPN3-213ENST00000565173 PPP6R2O75170 966 aa9.19□□□□□ -0.94
CAPN3-213ENST00000565173 USP17L7P0C7H9 530 aa9.19□□□□□ -0.94
CAPN3-213ENST00000565173 TMEM191BP0C7N4 346 aa9.19□□□□□ -0.94
CAPN3-213ENST00000565173 PCSK1P29120 753 aa9.19□□□□□ -0.94
CAPN3-213ENST00000565173 MAGEA11P43364 429 aa9.19□□□□□ -0.94
CAPN3-213ENST00000565173 RAP1GAPP47736 663 aa9.19□□□□□ -0.94
CAPN3-213ENST00000565173 USP46P62068 366 aa9.19□□□□□ -0.94
CAPN3-213ENST00000565173 EHHADHQ08426 723 aa9.19□□□□□ -0.94
CAPN3-213ENST00000565173 MYO1EQ12965 1108 aa9.19□□□□□ -0.94
CAPN3-213ENST00000565173 USP4Q13107 963 aa9.19□□□□□ -0.94
CAPN3-213ENST00000565173 MTF1Q14872 753 aa9.19□□□□□ -0.94
CAPN3-213ENST00000565173 PDGFRLQ15198 375 aa9.19□□□□□ -0.94
CAPN3-213ENST00000565173 DUOXA2Q1HG44 320 aa9.19□□□□□ -0.94
CAPN3-213ENST00000565173 EML3Q32P44 896 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms