RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 MYL7Q01449 175 aa15.15■□□□□ 0.02
CDR2-204ENST00000564542 FAM160A1Q05DH4 1040 aa15.15■□□□□ 0.02
CDR2-204ENST00000564542 KCNA1Q09470 495 aa15.15■□□□□ 0.02
CDR2-204ENST00000564542 ZNF77Q15935 545 aa15.15■□□□□ 0.02
CDR2-204ENST00000564542 DDR2Q16832 855 aa15.15■□□□□ 0.02
CDR2-204ENST00000564542 L1TD1Q5T7N2 865 aaKnown RBP15.15■□□□□ 0.02
CDR2-204ENST00000564542 SDHAF4Q5VUM1 108 aa15.15■□□□□ 0.02
CDR2-204ENST00000564542 LARP1BQ659C4 914 aaKnown RBP15.15■□□□□ 0.02
CDR2-204ENST00000564542 DYMQ7RTS9 669 aa15.15■□□□□ 0.02
CDR2-204ENST00000564542 LRRC52Q8N7C0 313 aa15.15■□□□□ 0.02
CDR2-204ENST00000564542 C1orf127Q8N9H9 656 aa15.15■□□□□ 0.02
CDR2-204ENST00000564542 SPATA18Q8TC71 538 aa15.15■□□□□ 0.02
CDR2-204ENST00000564542 OSCP1Q8WVF1 389 aa15.15■□□□□ 0.02
CDR2-204ENST00000564542 HHIPQ96QV1 700 aa15.15■□□□□ 0.02
CDR2-204ENST00000564542 PKMYT1Q99640 499 aa15.15■□□□□ 0.02
CDR2-204ENST00000564542 TMEM206Q9H813 350 aa15.15■□□□□ 0.02
CDR2-204ENST00000564542 ECT2Q9H8V3 914 aa15.15■□□□□ 0.02
CDR2-204ENST00000564542 MRPL44Q9H9J2 332 aaKnown RBP15.15■□□□□ 0.02
CDR2-204ENST00000564542 FBRSL1Q9HCM7 1045 aaKnown RBP15.15■□□□□ 0.02
CDR2-204ENST00000564542 RXFP3Q9NSD7 469 aa15.15■□□□□ 0.02
CDR2-204ENST00000564542 AGAP1Q9UPQ3 857 aa15.15■□□□□ 0.02
CDR2-204ENST00000564542 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.15■□□□□ 0.02
CDR2-204ENST00000564542 TRAV19A0A0A6YYK7 116 aa15.14■□□□□ 0.01
CDR2-204ENST00000564542 CKMP06732 381 aa15.14■□□□□ 0.01
CDR2-204ENST00000564542 GAP43P17677 238 aa15.14■□□□□ 0.01
CDR2-204ENST00000564542 ACAT1P24752 427 aaKnown RBP15.14■□□□□ 0.01
CDR2-204ENST00000564542 CYP2F1P24903 491 aa15.14■□□□□ 0.01
CDR2-204ENST00000564542 PMLP29590 882 aa15.14■□□□□ 0.01
CDR2-204ENST00000564542 MPLP40238 635 aa15.14■□□□□ 0.01
CDR2-204ENST00000564542 GALK1P51570 392 aa15.14■□□□□ 0.01
CDR2-204ENST00000564542 USP4Q13107 963 aa15.14■□□□□ 0.01
CDR2-204ENST00000564542 PLK5Q496M5 336 aa15.14■□□□□ 0.01
CDR2-204ENST00000564542 CFAP221Q4G0U5 840 aa15.14■□□□□ 0.01
CDR2-204ENST00000564542 STPG1Q5TH74 334 aa15.14■□□□□ 0.01
CDR2-204ENST00000564542 NAIF1Q69YI7 327 aaPredicted RBP15.14■□□□□ 0.01
CDR2-204ENST00000564542 SYT13Q7L8C5 426 aa15.14■□□□□ 0.01
CDR2-204ENST00000564542 RPLP0P6Q8NHW5 317 aa15.14■□□□□ 0.01
CDR2-204ENST00000564542 CXorf38Q8TB03 319 aa15.14■□□□□ 0.01
CDR2-204ENST00000564542 CACTINQ8WUQ7 758 aaKnown RBP15.14■□□□□ 0.01
CDR2-204ENST00000564542 ATP2A3Q93084 1043 aa15.14■□□□□ 0.01
CDR2-204ENST00000564542 ACDQ96AP0 544 aa15.14■□□□□ 0.01
CDR2-204ENST00000564542 SAAL1Q96ER3 474 aa15.14■□□□□ 0.01
CDR2-204ENST00000564542 EPSTI1Q96J88 318 aa15.14■□□□□ 0.01
CDR2-204ENST00000564542 CHAMP1Q96JM3 812 aa15.14■□□□□ 0.01
CDR2-204ENST00000564542 ACCSQ96QU6 501 aa15.14■□□□□ 0.01
CDR2-204ENST00000564542 TRPC7Q9HCX4 862 aa15.14■□□□□ 0.01
CDR2-204ENST00000564542 VPS45Q9NRW7 570 aa15.14■□□□□ 0.01
CDR2-204ENST00000564542 DUS2Q9NX74 493 aaKnown RBP15.14■□□□□ 0.01
CDR2-204ENST00000564542 GDAP2Q9NXN4 497 aa15.14■□□□□ 0.01
CDR2-204ENST00000564542 RBAKQ9NYW8 714 aaPredicted RBP15.14■□□□□ 0.01
CDR2-204ENST00000564542 CCDC39Q9UFE4 941 aa15.14■□□□□ 0.01
CDR2-204ENST00000564542 ANGPTL2Q9UKU9 493 aa15.14■□□□□ 0.01
CDR2-204ENST00000564542 ITGA11Q9UKX5 1188 aa15.14■□□□□ 0.01
CDR2-204ENST00000564542 HELZP42694 1942 aaKnown RBP15.13■□□□□ 0.01
CDR2-204ENST00000564542 CNOT1A5YKK6 2376 aaKnown RBP15.13■□□□□ 0.01
CDR2-204ENST00000564542 GCNT3O95395 438 aa15.13■□□□□ 0.01
CDR2-204ENST00000564542 APBB3O95704 486 aa15.13■□□□□ 0.01
CDR2-204ENST00000564542 LDHAP00338 332 aaKnown RBP15.13■□□□□ 0.01
CDR2-204ENST00000564542 USP17L7P0C7H9 530 aa15.13■□□□□ 0.01
CDR2-204ENST00000564542 GARTP22102 1010 aa15.13■□□□□ 0.01
CDR2-204ENST00000564542 USP49Q70CQ1 688 aa15.13■□□□□ 0.01
CDR2-204ENST00000564542 ADGRF2Q8IZF7 708 aa15.13■□□□□ 0.01
CDR2-204ENST00000564542 TOP6BLQ8N6T0 577 aa15.13■□□□□ 0.01
CDR2-204ENST00000564542 ZSWIM2Q8NEG5 633 aa15.13■□□□□ 0.01
CDR2-204ENST00000564542 EZH1Q92800 747 aaPredicted RBP15.13■□□□□ 0.01
CDR2-204ENST00000564542 CD101Q93033 1021 aa15.13■□□□□ 0.01
CDR2-204ENST00000564542 DNAJC19Q96DA6 116 aa15.13■□□□□ 0.01
CDR2-204ENST00000564542 FUBP3Q96I24 572 aaKnown RBP eCLIP15.13■□□□□ 0.01
CDR2-204ENST00000564542 SLC22A12Q96S37 553 aa15.13■□□□□ 0.01
CDR2-204ENST00000564542 OLFML3Q9NRN5 406 aa15.13■□□□□ 0.01
CDR2-204ENST00000564542 POLR3BQ9NW08 1133 aaPredicted RBP15.13■□□□□ 0.01
CDR2-204ENST00000564542 EBF1Q9UH73 591 aa15.13■□□□□ 0.01
CDR2-204ENST00000564542 GTF3C4Q9UKN8 822 aa15.13■□□□□ 0.01
CDR2-204ENST00000564542 SNX9Q9Y5X1 595 aa15.13■□□□□ 0.01
CDR2-204ENST00000564542 ANAPC1Q9H1A4 1944 aa15.12■□□□□ 0.01
CDR2-204ENST00000564542 MYMKA6NI61 221 aa15.12■□□□□ 0.01
CDR2-204ENST00000564542 GABRDO14764 452 aa15.12■□□□□ 0.01
CDR2-204ENST00000564542 PCSK1P29120 753 aa15.12■□□□□ 0.01
CDR2-204ENST00000564542 IFNAR2P48551 515 aa15.12■□□□□ 0.01
CDR2-204ENST00000564542 LHX1P48742 406 aa15.12■□□□□ 0.01
CDR2-204ENST00000564542 SHC2P98077 582 aa15.12■□□□□ 0.01
CDR2-204ENST00000564542 ALCAMQ13740 583 aa15.12■□□□□ 0.01
CDR2-204ENST00000564542 ELF2Q15723 593 aa15.12■□□□□ 0.01
CDR2-204ENST00000564542 CCDC142Q17RM4 750 aa15.12■□□□□ 0.01
CDR2-204ENST00000564542 EML3Q32P44 896 aa15.12■□□□□ 0.01
CDR2-204ENST00000564542 N4BP2L1Q5TBK1 243 aaPredicted RBP15.12■□□□□ 0.01
CDR2-204ENST00000564542 OSTM1Q86WC4 334 aa15.12■□□□□ 0.01
CDR2-204ENST00000564542 SPATA2LQ8IUW3 424 aaPredicted RBP15.12■□□□□ 0.01
CDR2-204ENST00000564542 CSGALNACT2Q8N6G5 542 aa15.12■□□□□ 0.01
CDR2-204ENST00000564542 FSIP1Q8NA03 581 aa15.12■□□□□ 0.01
CDR2-204ENST00000564542 DUSP15Q9H1R2 295 aaPredicted RBP15.12■□□□□ 0.01
CDR2-204ENST00000564542 SMOC1Q9H4F8 434 aa15.12■□□□□ 0.01
CDR2-204ENST00000564542 TBC1D7Q9P0N9 293 aa15.12■□□□□ 0.01
CDR2-204ENST00000564542 PCDHB13Q9Y5F0 798 aa15.12■□□□□ 0.01
CDR2-204ENST00000564542 WNT6Q9Y6F9 365 aa15.12■□□□□ 0.01
CDR2-204ENST00000564542 ATG2BQ96BY7 2078 aa15.12■□□□□ 0.01
CDR2-204ENST00000564542 CFAP47Q6ZTR5 3102 aa15.11■□□□□ 0.01
CDR2-204ENST00000564542 SDK1Q7Z5N4 2213 aa15.11■□□□□ 0.01
CDR2-204ENST00000564542 CEP295Q9C0D2 2601 aa15.11■□□□□ 0.01
CDR2-204ENST00000564542 TULP1O00294 542 aaPredicted RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms