RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 LMNAP02545 664 aaKnown RBP18.92■□□□□ 0.62
NME3-205ENST00000563854 F11P03951 625 aa18.92■□□□□ 0.62
NME3-205ENST00000563854 CMA1P23946 247 aa18.92■□□□□ 0.62
NME3-205ENST00000563854 RPS9P46781 194 aaKnown RBP18.92■□□□□ 0.62
NME3-205ENST00000563854 STK4Q13043 487 aa18.92■□□□□ 0.62
NME3-205ENST00000563854 MTAPQ13126 283 aa18.92■□□□□ 0.62
NME3-205ENST00000563854 BIRC3Q13489 604 aa18.92■□□□□ 0.62
NME3-205ENST00000563854 TXNDC8Q6A555 127 aa18.92■□□□□ 0.62
NME3-205ENST00000563854 C4orf50Q6ZRC1 276 aa18.92■□□□□ 0.62
NME3-205ENST00000563854 TMEM150AQ86TG1 271 aa18.92■□□□□ 0.62
NME3-205ENST00000563854 CMTM8Q8IZV2 173 aa18.92■□□□□ 0.62
NME3-205ENST00000563854 CELF5Q8N6W0 485 aaKnown RBP18.92■□□□□ 0.62
NME3-205ENST00000563854 KIAA0895Q8NCT3 520 aa18.92■□□□□ 0.62
NME3-205ENST00000563854 HINFPQ9BQA5 517 aa18.92■□□□□ 0.62
NME3-205ENST00000563854 MRPL45Q9BRJ2 306 aaKnown RBP18.92■□□□□ 0.62
NME3-205ENST00000563854 LMAN1LQ9HAT1 526 aa18.92■□□□□ 0.62
NME3-205ENST00000563854 OBP2AQ9NY56 170 aa18.92■□□□□ 0.62
NME3-205ENST00000563854 GTSE1Q9NYZ3 720 aa18.92■□□□□ 0.62
NME3-205ENST00000563854 CGNQ9P2M7 1197 aaKnown RBP18.92■□□□□ 0.62
NME3-205ENST00000563854 FBXO4Q9UKT5 387 aa18.92■□□□□ 0.62
NME3-205ENST00000563854 CDH9Q9ULB4 789 aa18.92■□□□□ 0.62
NME3-205ENST00000563854 WARSP23381 471 aaKnown RBP18.91■□□□□ 0.62
NME3-205ENST00000563854 SYKP43405 635 aa18.91■□□□□ 0.62
NME3-205ENST00000563854 TNK2Q07912 1038 aa18.91■□□□□ 0.62
NME3-205ENST00000563854 FZD5Q13467 585 aa18.91■□□□□ 0.62
NME3-205ENST00000563854 WDR72Q3MJ13 1102 aa18.91■□□□□ 0.62
NME3-205ENST00000563854 C12orf56Q8IXR9 622 aa18.91■□□□□ 0.62
NME3-205ENST00000563854 OR6B3Q8NGW1 331 aa18.91■□□□□ 0.62
NME3-205ENST00000563854 GOLGA5Q8TBA6 731 aa18.91■□□□□ 0.62
NME3-205ENST00000563854 C8orf33Q9H7E9 229 aaPredicted RBP18.91■□□□□ 0.62
NME3-205ENST00000563854 CRTAC1Q9NQ79 661 aa18.91■□□□□ 0.62
NME3-205ENST00000563854 THG1LQ9NWX6 298 aaKnown RBP18.91■□□□□ 0.62
NME3-205ENST00000563854 MAGEC2Q9UBF1 373 aaPredicted RBP18.91■□□□□ 0.62
NME3-205ENST00000563854 UXTQ9UBK9 157 aaPredicted RBP18.91■□□□□ 0.62
NME3-205ENST00000563854 NXF1Q9UBU9 619 aaKnown RBP18.91■□□□□ 0.62
NME3-205ENST00000563854 SPECC1L-ADORA2AF8WAN1 911 aa18.9■□□□□ 0.62
NME3-205ENST00000563854 KINO60870 393 aaKnown RBP18.9■□□□□ 0.62
NME3-205ENST00000563854 NOL4O94818 638 aa18.9■□□□□ 0.62
NME3-205ENST00000563854 BDNFP23560 247 aa18.9■□□□□ 0.62
NME3-205ENST00000563854 DDX6P26196 483 aaKnown RBP eCLIP18.9■□□□□ 0.62
NME3-205ENST00000563854 NDUFA8P51970 172 aa18.9■□□□□ 0.62
NME3-205ENST00000563854 MYL6P60660 151 aa18.9■□□□□ 0.62
NME3-205ENST00000563854 CFAP221Q4G0U5 840 aa18.9■□□□□ 0.62
NME3-205ENST00000563854 MDH1BQ5I0G3 518 aa18.9■□□□□ 0.62
NME3-205ENST00000563854 ZNF516Q92618 1163 aa18.9■□□□□ 0.62
NME3-205ENST00000563854 MSANTD3Q96H12 275 aa18.9■□□□□ 0.62
NME3-205ENST00000563854 FUBP3Q96I24 572 aaKnown RBP eCLIP18.9■□□□□ 0.62
NME3-205ENST00000563854 CHRDQ9H2X0 955 aa18.9■□□□□ 0.62
NME3-205ENST00000563854 SEMA4AQ9H3S1 761 aa18.9■□□□□ 0.62
NME3-205ENST00000563854 RBM12Q9NTZ6 932 aaKnown RBP18.9■□□□□ 0.62
NME3-205ENST00000563854 USP25Q9UHP3 1055 aa18.9■□□□□ 0.62
NME3-205ENST00000563854 HPSEQ9Y251 543 aa18.9■□□□□ 0.62
NME3-205ENST00000563854 CCL26Q9Y258 94 aa18.9■□□□□ 0.62
NME3-205ENST00000563854 OBSL1O75147 1896 aa18.89■□□□□ 0.61
NME3-205ENST00000563854 TADA3O75528 432 aa18.89■□□□□ 0.61
NME3-205ENST00000563854 RPN1P04843 607 aaKnown RBP18.89■□□□□ 0.61
NME3-205ENST00000563854 PRR29P0C7W0 189 aa18.89■□□□□ 0.61
NME3-205ENST00000563854 ANXA13P27216 316 aa18.89■□□□□ 0.61
NME3-205ENST00000563854 WEE1P30291 646 aa18.89■□□□□ 0.61
NME3-205ENST00000563854 CTHP32929 405 aa18.89■□□□□ 0.61
NME3-205ENST00000563854 GNL1P36915 607 aaPredicted RBP18.89■□□□□ 0.61
NME3-205ENST00000563854 GRIK1P39086 918 aa18.89■□□□□ 0.61
NME3-205ENST00000563854 PLCB2Q00722 1185 aa18.89■□□□□ 0.61
NME3-205ENST00000563854 PSMD2Q13200 908 aa18.89■□□□□ 0.61
NME3-205ENST00000563854 MAPRE1Q15691 268 aaKnown RBP18.89■□□□□ 0.61
NME3-205ENST00000563854 FAM171BQ6P995 826 aa18.89■□□□□ 0.61
NME3-205ENST00000563854 TXNDC11Q6PKC3 985 aa18.89■□□□□ 0.61
NME3-205ENST00000563854 SCARA5Q6ZMJ2 495 aa18.89■□□□□ 0.61
NME3-205ENST00000563854 ZNF687Q8N1G0 1237 aa18.89■□□□□ 0.61
NME3-205ENST00000563854 FSIP1Q8NA03 581 aa18.89■□□□□ 0.61
NME3-205ENST00000563854 PLEKHO2Q8TD55 490 aa18.89■□□□□ 0.61
NME3-205ENST00000563854 ATRIPQ8WXE1 791 aa18.89■□□□□ 0.61
NME3-205ENST00000563854 USP13Q92995 863 aaPredicted RBP18.89■□□□□ 0.61
NME3-205ENST00000563854 CCDC47Q96A33 483 aaKnown RBP18.89■□□□□ 0.61
NME3-205ENST00000563854 GZF1Q9H116 711 aaPredicted RBP18.89■□□□□ 0.61
NME3-205ENST00000563854 GKN1Q9NS71 199 aa18.89■□□□□ 0.61
NME3-205ENST00000563854 ZMYM5Q9UJ78 669 aa18.89■□□□□ 0.61
NME3-205ENST00000563854 ATP6V1DQ9Y5K8 247 aa18.89■□□□□ 0.61
NME3-205ENST00000563854 CACNA1IQ9P0X4 2223 aa18.89■□□□□ 0.61
NME3-205ENST00000563854 LRRIQ3A6PVS8 624 aaPredicted RBP18.88■□□□□ 0.61
NME3-205ENST00000563854 CKMP06732 381 aa18.88■□□□□ 0.61
NME3-205ENST00000563854 MAGEA11P43364 429 aa18.88■□□□□ 0.61
NME3-205ENST00000563854 LRRC32Q14392 662 aa18.88■□□□□ 0.61
NME3-205ENST00000563854 PON2Q15165 354 aa18.88■□□□□ 0.61
NME3-205ENST00000563854 ZNF699Q32M78 642 aa18.88■□□□□ 0.61
NME3-205ENST00000563854 ITPRIPL2Q3MIP1 535 aa18.88■□□□□ 0.61
NME3-205ENST00000563854 ZNF528Q3MIS6 628 aa18.88■□□□□ 0.61
NME3-205ENST00000563854 TDRD10Q5VZ19 366 aaKnown RBP18.88■□□□□ 0.61
NME3-205ENST00000563854 CEP135Q66GS9 1140 aa18.88■□□□□ 0.61
NME3-205ENST00000563854 TRIM68Q6AZZ1 485 aa18.88■□□□□ 0.61
NME3-205ENST00000563854 LIMS2Q7Z4I7 341 aa18.88■□□□□ 0.61
NME3-205ENST00000563854 MON1AQ86VX9 555 aa18.88■□□□□ 0.61
NME3-205ENST00000563854 RALGPS2Q86X27 583 aaPredicted RBP18.88■□□□□ 0.61
NME3-205ENST00000563854 SYAP1Q96A49 352 aaPredicted RBP18.88■□□□□ 0.61
NME3-205ENST00000563854 ELMO3Q96BJ8 720 aa18.88■□□□□ 0.61
NME3-205ENST00000563854 TRMT2BQ96GJ1 504 aaKnown RBP18.88■□□□□ 0.61
NME3-205ENST00000563854 PCED1BQ96HM7 432 aa18.88■□□□□ 0.61
NME3-205ENST00000563854 DPEP3Q9H4B8 488 aa18.88■□□□□ 0.61
NME3-205ENST00000563854 KIF9Q9HAQ2 790 aa18.88■□□□□ 0.61
NME3-205ENST00000563854 GDPD2Q9HCC8 539 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms