RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 CNOT1A5YKK6 2376 aaKnown RBP20.07■□□□□ 0.8
NME3-204ENST00000563498 EML5Q05BV3 1969 aa20.07■□□□□ 0.8
NME3-204ENST00000563498 ZNF638Q14966 1978 aaKnown RBP20.07■□□□□ 0.8
NME3-204ENST00000563498 HUS1O60921 280 aa20.07■□□□□ 0.8
NME3-204ENST00000563498 POLR2BP30876 1174 aaKnown RBP20.07■□□□□ 0.8
NME3-204ENST00000563498 TFAMQ00059 246 aaKnown RBP20.07■□□□□ 0.8
NME3-204ENST00000563498 MYL7Q01449 175 aa20.07■□□□□ 0.8
NME3-204ENST00000563498 C8orf34Q49A92 452 aa20.07■□□□□ 0.8
NME3-204ENST00000563498 CFAP221Q4G0U5 840 aa20.07■□□□□ 0.8
NME3-204ENST00000563498 INTS6LQ5JSJ4 861 aaKnown RBP20.07■□□□□ 0.8
NME3-204ENST00000563498 BRSK2Q8IWQ3 736 aa20.07■□□□□ 0.8
NME3-204ENST00000563498 CACTINQ8WUQ7 758 aaKnown RBP20.07■□□□□ 0.8
NME3-204ENST00000563498 ATP2A3Q93084 1043 aa20.07■□□□□ 0.8
NME3-204ENST00000563498 ACDQ96AP0 544 aa20.07■□□□□ 0.8
NME3-204ENST00000563498 IKZF4Q9H2S9 585 aa20.07■□□□□ 0.8
NME3-204ENST00000563498 DUS2Q9NX74 493 aaKnown RBP20.07■□□□□ 0.8
NME3-204ENST00000563498 GDAP2Q9NXN4 497 aa20.07■□□□□ 0.8
NME3-204ENST00000563498 AGAP1Q9UPQ3 857 aa20.07■□□□□ 0.8
NME3-204ENST00000563498 APBB3O95704 486 aa20.06■□□□□ 0.8
NME3-204ENST00000563498 LDHAP00338 332 aaKnown RBP20.06■□□□□ 0.8
NME3-204ENST00000563498 ITGB3P05106 788 aa20.06■□□□□ 0.8
NME3-204ENST00000563498 USP17L7P0C7H9 530 aa20.06■□□□□ 0.8
NME3-204ENST00000563498 CYP2F1P24903 491 aa20.06■□□□□ 0.8
NME3-204ENST00000563498 USP4Q13107 963 aa20.06■□□□□ 0.8
NME3-204ENST00000563498 SF3A1Q15459 793 aaKnown RBP20.06■□□□□ 0.8
NME3-204ENST00000563498 ELF2Q15723 593 aa20.06■□□□□ 0.8
NME3-204ENST00000563498 ZNF77Q15935 545 aa20.06■□□□□ 0.8
NME3-204ENST00000563498 DDR2Q16832 855 aa20.06■□□□□ 0.8
NME3-204ENST00000563498 SDHAF4Q5VUM1 108 aa20.06■□□□□ 0.8
NME3-204ENST00000563498 LARP1BQ659C4 914 aaKnown RBP20.06■□□□□ 0.8
NME3-204ENST00000563498 C1orf127Q8N9H9 656 aa20.06■□□□□ 0.8
NME3-204ENST00000563498 STKLD1Q8NE28 680 aa20.06■□□□□ 0.8
NME3-204ENST00000563498 RPLP0P6Q8NHW5 317 aa20.06■□□□□ 0.8
NME3-204ENST00000563498 CCDC26Q8TAB7 109 aa20.06■□□□□ 0.8
NME3-204ENST00000563498 CXorf38Q8TB03 319 aa20.06■□□□□ 0.8
NME3-204ENST00000563498 CD101Q93033 1021 aa20.06■□□□□ 0.8
NME3-204ENST00000563498 FUBP3Q96I24 572 aaKnown RBP eCLIP20.06■□□□□ 0.8
NME3-204ENST00000563498 HHIPQ96QV1 700 aa20.06■□□□□ 0.8
NME3-204ENST00000563498 FAM213AQ9BRX8 229 aa20.06■□□□□ 0.8
NME3-204ENST00000563498 LSM14BQ9BX40 385 aaKnown RBP20.06■□□□□ 0.8
NME3-204ENST00000563498 DUSP15Q9H1R2 295 aaPredicted RBP20.06■□□□□ 0.8
NME3-204ENST00000563498 MRPL44Q9H9J2 332 aaKnown RBP20.06■□□□□ 0.8
NME3-204ENST00000563498 STK17AQ9UEE5 414 aa20.06■□□□□ 0.8
NME3-204ENST00000563498 ITGA11Q9UKX5 1188 aa20.06■□□□□ 0.8
NME3-204ENST00000563498 SMC3Q9UQE7 1217 aa20.06■□□□□ 0.8
NME3-204ENST00000563498 ZFHX4Q86UP3 3567 aa20.05■□□□□ 0.8
NME3-204ENST00000563498 TRAV19A0A0A6YYK7 116 aa20.05■□□□□ 0.8
NME3-204ENST00000563498 RHOBTB1O94844 696 aa20.05■□□□□ 0.8
NME3-204ENST00000563498 TCF3P15923 654 aa20.05■□□□□ 0.8
NME3-204ENST00000563498 GAP43P17677 238 aa20.05■□□□□ 0.8
NME3-204ENST00000563498 WNT7BP56706 349 aa20.05■□□□□ 0.8
NME3-204ENST00000563498 L1TD1Q5T7N2 865 aaKnown RBP20.05■□□□□ 0.8
NME3-204ENST00000563498 DYMQ7RTS9 669 aa20.05■□□□□ 0.8
NME3-204ENST00000563498 ACCSQ96QU6 501 aa20.05■□□□□ 0.8
NME3-204ENST00000563498 POLR3BQ9NW08 1133 aaPredicted RBP20.05■□□□□ 0.8
NME3-204ENST00000563498 SDK1Q7Z5N4 2213 aa20.04■□□□□ 0.8
NME3-204ENST00000563498 GABRDO14764 452 aa20.04■□□□□ 0.8
NME3-204ENST00000563498 CKMP06732 381 aa20.04■□□□□ 0.8
NME3-204ENST00000563498 GARTP22102 1010 aa20.04■□□□□ 0.8
NME3-204ENST00000563498 ACAT1P24752 427 aaKnown RBP20.04■□□□□ 0.8
NME3-204ENST00000563498 PCSK1P29120 753 aa20.04■□□□□ 0.8
NME3-204ENST00000563498 IFNAR2P48551 515 aa20.04■□□□□ 0.8
NME3-204ENST00000563498 LHX1P48742 406 aa20.04■□□□□ 0.8
NME3-204ENST00000563498 KCNA1Q09470 495 aa20.04■□□□□ 0.8
NME3-204ENST00000563498 DMC1Q14565 340 aa20.04■□□□□ 0.8
NME3-204ENST00000563498 EML3Q32P44 896 aa20.04■□□□□ 0.8
NME3-204ENST00000563498 NAIF1Q69YI7 327 aaPredicted RBP20.04■□□□□ 0.8
NME3-204ENST00000563498 TOP6BLQ8N6T0 577 aa20.04■□□□□ 0.8
NME3-204ENST00000563498 FSIP1Q8NA03 581 aa20.04■□□□□ 0.8
NME3-204ENST00000563498 EZH1Q92800 747 aaPredicted RBP20.04■□□□□ 0.8
NME3-204ENST00000563498 EPSTI1Q96J88 318 aa20.04■□□□□ 0.8
NME3-204ENST00000563498 SLC22A12Q96S37 553 aa20.04■□□□□ 0.8
NME3-204ENST00000563498 CYP2S1Q96SQ9 504 aa20.04■□□□□ 0.8
NME3-204ENST00000563498 TRPC7Q9HCX4 862 aa20.04■□□□□ 0.8
NME3-204ENST00000563498 OLFML3Q9NRN5 406 aa20.04■□□□□ 0.8
NME3-204ENST00000563498 RBAKQ9NYW8 714 aaPredicted RBP20.04■□□□□ 0.8
NME3-204ENST00000563498 GCNT4Q9P109 453 aa20.04■□□□□ 0.8
NME3-204ENST00000563498 CCDC39Q9UFE4 941 aa20.04■□□□□ 0.8
NME3-204ENST00000563498 GTF3C4Q9UKN8 822 aa20.04■□□□□ 0.8
NME3-204ENST00000563498 KCNK5O95279 499 aa20.03■□□□□ 0.8
NME3-204ENST00000563498 MAGEA11P43364 429 aa20.03■□□□□ 0.8
NME3-204ENST00000563498 PDE6CP51160 858 aa20.03■□□□□ 0.8
NME3-204ENST00000563498 RBP5P82980 135 aa20.03■□□□□ 0.8
NME3-204ENST00000563498 NR1H3Q13133 447 aa20.03■□□□□ 0.8
NME3-204ENST00000563498 ALCAMQ13740 583 aa20.03■□□□□ 0.8
NME3-204ENST00000563498 RNF43Q68DV7 783 aa20.03■□□□□ 0.8
NME3-204ENST00000563498 C11orf74Q86VG3 221 aa20.03■□□□□ 0.8
NME3-204ENST00000563498 SPATA2LQ8IUW3 424 aaPredicted RBP20.03■□□□□ 0.8
NME3-204ENST00000563498 SAAL1Q96ER3 474 aa20.03■□□□□ 0.8
NME3-204ENST00000563498 CEP295NLQ96MC4 621 aa20.03■□□□□ 0.8
NME3-204ENST00000563498 SMOC1Q9H4F8 434 aa20.03■□□□□ 0.8
NME3-204ENST00000563498 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.03■□□□□ 0.8
NME3-204ENST00000563498 PCDHB13Q9Y5F0 798 aa20.03■□□□□ 0.8
NME3-204ENST00000563498 SNX9Q9Y5X1 595 aa20.03■□□□□ 0.8
NME3-204ENST00000563498 WNT6Q9Y6F9 365 aa20.03■□□□□ 0.8
NME3-204ENST00000563498 KIAA1549LQ6ZVL6 1849 aa20.03■□□□□ 0.8
NME3-204ENST00000563498 BCLAF3A2AJT9 711 aaKnown RBP20.02■□□□□ 0.8
NME3-204ENST00000563498 CD2BP2O95400 341 aaKnown RBP20.02■□□□□ 0.8
NME3-204ENST00000563498 PFKLP17858 780 aa20.02■□□□□ 0.8
NME3-204ENST00000563498 FAM171BQ6P995 826 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms