RNA–Protein interactions for RNA: ENST00000563412.1

TUBGCP4-205, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 5

Gene TUBGCP4, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-205ENST00000563412 GCNT1Q02742 428 aa6.91□□□□□ -1.3
TUBGCP4-205ENST00000563412 NFX1Q12986 1120 aaKnown RBP6.91□□□□□ -1.3
TUBGCP4-205ENST00000563412 MTF1Q14872 753 aa6.91□□□□□ -1.3
TUBGCP4-205ENST00000563412 DRAP1Q14919 205 aaPredicted RBP6.91□□□□□ -1.3
TUBGCP4-205ENST00000563412 TMEM132DQ14C87 1099 aa6.91□□□□□ -1.3
TUBGCP4-205ENST00000563412 NAB2Q15742 525 aa6.91□□□□□ -1.3
TUBGCP4-205ENST00000563412 ASTE1Q2TB18 679 aaPredicted RBP6.91□□□□□ -1.3
TUBGCP4-205ENST00000563412 TWF2Q6IBS0 349 aaKnown RBP6.91□□□□□ -1.3
TUBGCP4-205ENST00000563412 CYP26C1Q6V0L0 522 aa6.91□□□□□ -1.3
TUBGCP4-205ENST00000563412 RAD9BQ6WBX8 426 aa6.91□□□□□ -1.3
TUBGCP4-205ENST00000563412 CACNA2D4Q7Z3S7 1137 aa6.91□□□□□ -1.3
TUBGCP4-205ENST00000563412 IRF2BP2Q7Z5L9 587 aa6.91□□□□□ -1.3
TUBGCP4-205ENST00000563412 ZNF598Q86UK7 904 aaKnown RBP6.91□□□□□ -1.3
TUBGCP4-205ENST00000563412 RTN4RL1Q86UN2 441 aaPredicted RBP6.91□□□□□ -1.3
TUBGCP4-205ENST00000563412 TMTC1Q8IUR5 882 aa6.91□□□□□ -1.3
TUBGCP4-205ENST00000563412 FAM71AQ8IYT1 594 aa6.91□□□□□ -1.3
TUBGCP4-205ENST00000563412 UBR7Q8N806 425 aa6.91□□□□□ -1.3
TUBGCP4-205ENST00000563412 GSTCDQ8NEC7 633 aa6.91□□□□□ -1.3
TUBGCP4-205ENST00000563412 ZNF397Q8NF99 534 aaPredicted RBP6.91□□□□□ -1.3
TUBGCP4-205ENST00000563412 VN1R2Q8NFZ6 395 aa6.91□□□□□ -1.3
TUBGCP4-205ENST00000563412 PRR7Q8TB68 274 aa6.91□□□□□ -1.3
TUBGCP4-205ENST00000563412 KAT5Q92993 513 aa6.91□□□□□ -1.3
TUBGCP4-205ENST00000563412 TATDN2Q93075 761 aa6.91□□□□□ -1.3
TUBGCP4-205ENST00000563412 NXPE3Q969Y0 559 aa6.91□□□□□ -1.3
TUBGCP4-205ENST00000563412 ELMO3Q96BJ8 720 aa6.91□□□□□ -1.3
TUBGCP4-205ENST00000563412 CHP1Q99653 195 aa6.91□□□□□ -1.3
TUBGCP4-205ENST00000563412 ADAM2Q99965 735 aa6.91□□□□□ -1.3
TUBGCP4-205ENST00000563412 PI4K2AQ9BTU6 479 aa6.91□□□□□ -1.3
TUBGCP4-205ENST00000563412 TRIM6Q9C030 488 aaPredicted RBP6.91□□□□□ -1.3
TUBGCP4-205ENST00000563412 SMOC2Q9H3U7 446 aa6.91□□□□□ -1.3
TUBGCP4-205ENST00000563412 POMKQ9H5K3 350 aa6.91□□□□□ -1.3
TUBGCP4-205ENST00000563412 RGS18Q9NS28 235 aa6.91□□□□□ -1.3
TUBGCP4-205ENST00000563412 ARHGAP20Q9P2F6 1191 aa6.91□□□□□ -1.3
TUBGCP4-205ENST00000563412 GMEB2Q9UKD1 530 aa6.91□□□□□ -1.3
TUBGCP4-205ENST00000563412 ZMIZ1Q9ULJ6 1067 aa6.91□□□□□ -1.3
TUBGCP4-205ENST00000563412 DUSP12Q9UNI6 340 aa6.91□□□□□ -1.3
TUBGCP4-205ENST00000563412 CNTN6Q9UQ52 1028 aa6.91□□□□□ -1.3
TUBGCP4-205ENST00000563412 LZTS1Q9Y250 596 aa6.91□□□□□ -1.3
TUBGCP4-205ENST00000563412 NUB1Q9Y5A7 615 aa6.91□□□□□ -1.3
TUBGCP4-205ENST00000563412 MRPL42Q9Y6G3 142 aaKnown RBP6.91□□□□□ -1.3
TUBGCP4-205ENST00000563412 SMIM28A0A1B0GU29 152 aa6.9□□□□□ -1.3
TUBGCP4-205ENST00000563412 ANO9A1A5B4 782 aa6.9□□□□□ -1.3
TUBGCP4-205ENST00000563412 SOWAHDA6NJG2 315 aa6.9□□□□□ -1.3
TUBGCP4-205ENST00000563412 ESPNB1AK53 854 aa6.9□□□□□ -1.3
TUBGCP4-205ENST00000563412 FOXN3O00409 490 aaPredicted RBP6.9□□□□□ -1.3
TUBGCP4-205ENST00000563412 STAU1O95793 577 aaKnown RBP6.9□□□□□ -1.3
TUBGCP4-205ENST00000563412 EOMESO95936 686 aa6.9□□□□□ -1.3
TUBGCP4-205ENST00000563412 TNNC2P02585 160 aa6.9□□□□□ -1.3
TUBGCP4-205ENST00000563412 ITGB3P05106 788 aa6.9□□□□□ -1.3
TUBGCP4-205ENST00000563412 PLEKP08567 350 aaPredicted RBP6.9□□□□□ -1.3
TUBGCP4-205ENST00000563412 TMEM191BP0C7N4 346 aa6.9□□□□□ -1.3
TUBGCP4-205ENST00000563412 PNMA6AP0CW24 399 aaPredicted RBP6.9□□□□□ -1.3
TUBGCP4-205ENST00000563412 ACO1P21399 889 aaKnown RBP6.9□□□□□ -1.3
TUBGCP4-205ENST00000563412 SOX5P35711 763 aa6.9□□□□□ -1.3
TUBGCP4-205ENST00000563412 GUCY2FP51841 1108 aa6.9□□□□□ -1.3
TUBGCP4-205ENST00000563412 YARSP54577 528 aaKnown RBP6.9□□□□□ -1.3
TUBGCP4-205ENST00000563412 NOP14P78316 857 aaKnown RBP6.9□□□□□ -1.3
TUBGCP4-205ENST00000563412 SOX4Q06945 474 aaPredicted RBP6.9□□□□□ -1.3
TUBGCP4-205ENST00000563412 MMRN1Q13201 1228 aa6.9□□□□□ -1.3
TUBGCP4-205ENST00000563412 BIRC3Q13489 604 aa6.9□□□□□ -1.3
TUBGCP4-205ENST00000563412 RAPGEF1Q13905 1077 aa6.9□□□□□ -1.3
TUBGCP4-205ENST00000563412 BMS1Q14692 1282 aaKnown RBP6.9□□□□□ -1.3
TUBGCP4-205ENST00000563412 SGSM1Q2NKQ1 1148 aa6.9□□□□□ -1.3
TUBGCP4-205ENST00000563412 SFMBT2Q5VUG0 894 aa6.9□□□□□ -1.3
TUBGCP4-205ENST00000563412 SPOPLQ6IQ16 392 aa6.9□□□□□ -1.3
TUBGCP4-205ENST00000563412 DNAJC14Q6Y2X3 702 aaPredicted RBP6.9□□□□□ -1.3
TUBGCP4-205ENST00000563412 AGMOQ6ZNB7 445 aa6.9□□□□□ -1.3
TUBGCP4-205ENST00000563412 TOGARAM2Q6ZUX3 1019 aa6.9□□□□□ -1.3
TUBGCP4-205ENST00000563412 ENOSF1Q7L5Y1 443 aa6.9□□□□□ -1.3
TUBGCP4-205ENST00000563412 ECHDC2Q86YB7 292 aa6.9□□□□□ -1.3
TUBGCP4-205ENST00000563412 SPNS2Q8IVW8 549 aa6.9□□□□□ -1.3
TUBGCP4-205ENST00000563412 CRIPAKQ8N1N5 446 aa6.9□□□□□ -1.3
TUBGCP4-205ENST00000563412 PPM1KQ8N3J5 372 aa6.9□□□□□ -1.3
TUBGCP4-205ENST00000563412 TAF4BQ92750 862 aa6.9□□□□□ -1.3
TUBGCP4-205ENST00000563412 JAKMIP2Q96AA8 810 aa6.9□□□□□ -1.3
TUBGCP4-205ENST00000563412 C18orf25Q96B23 403 aaPredicted RBP6.9□□□□□ -1.3
TUBGCP4-205ENST00000563412 FAXDC2Q96IV6 333 aa6.9□□□□□ -1.3
TUBGCP4-205ENST00000563412 ANKRD36BP1Q96IX9 119 aa6.9□□□□□ -1.3
TUBGCP4-205ENST00000563412 ZFP42Q96MM3 310 aa6.9□□□□□ -1.3
TUBGCP4-205ENST00000563412 NT5C1BQ96P26 610 aa6.9□□□□□ -1.3
TUBGCP4-205ENST00000563412 PPP1R10Q96QC0 940 aaKnown RBP6.9□□□□□ -1.3
TUBGCP4-205ENST00000563412 FTHL17Q9BXU8 183 aa6.9□□□□□ -1.3
TUBGCP4-205ENST00000563412 FAM126AQ9BYI3 521 aaPredicted RBP6.9□□□□□ -1.3
TUBGCP4-205ENST00000563412 EPC1Q9H2F5 836 aa6.9□□□□□ -1.3
TUBGCP4-205ENST00000563412 KCNK12Q9HB15 430 aa6.9□□□□□ -1.3
TUBGCP4-205ENST00000563412 UBE2TQ9NPD8 197 aaPredicted RBP6.9□□□□□ -1.3
TUBGCP4-205ENST00000563412 C1orf112Q9NSG2 853 aa6.9□□□□□ -1.3
TUBGCP4-205ENST00000563412 RNF19AQ9NV58 838 aa6.9□□□□□ -1.3
TUBGCP4-205ENST00000563412 ZSCAN32Q9NX65 697 aa6.9□□□□□ -1.3
TUBGCP4-205ENST00000563412 DPP3Q9NY33 737 aa6.9□□□□□ -1.3
TUBGCP4-205ENST00000563412 TUBGCP4Q9UGJ1 667 aa6.9□□□□□ -1.3
TUBGCP4-205ENST00000563412 ITGA11Q9UKX5 1188 aa6.9□□□□□ -1.3
TUBGCP4-205ENST00000563412 NENFQ9UMX5 172 aa6.9□□□□□ -1.3
TUBGCP4-205ENST00000563412 GIT1Q9Y2X7 761 aa6.9□□□□□ -1.3
TUBGCP4-205ENST00000563412 REXO2Q9Y3B8 237 aaKnown RBP6.9□□□□□ -1.3
TUBGCP4-205ENST00000563412 PCDHGA4Q9Y5G9 962 aa6.9□□□□□ -1.3
TUBGCP4-205ENST00000563412 SCN1AP35498 2009 aa6.89□□□□□ -1.31
TUBGCP4-205ENST00000563412 SSU72P8A0A1W2PR75 194 aa6.89□□□□□ -1.31
TUBGCP4-205ENST00000563412 ARL5CA6NH57 179 aa6.89□□□□□ -1.31
TUBGCP4-205ENST00000563412 PPEF2O14830 753 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms