RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 XPR1Q9UBH6 696 aa3.98□□□□□ -1.77
SHCBP1-202ENST00000563219 CPNE7Q9UBL6 633 aa3.98□□□□□ -1.77
SHCBP1-202ENST00000563219 HESX1Q9UBX0 185 aa3.98□□□□□ -1.77
SHCBP1-202ENST00000563219 AFF4Q9UHB7 1163 aaKnown RBP3.98□□□□□ -1.77
SHCBP1-202ENST00000563219 OGDHLQ9ULD0 1010 aa3.98□□□□□ -1.77
SHCBP1-202ENST00000563219 MAP3K2Q9Y2U5 619 aa3.98□□□□□ -1.77
SHCBP1-202ENST00000563219 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.98□□□□□ -1.77
SHCBP1-202ENST00000563219 NOX1Q9Y5S8 564 aa3.98□□□□□ -1.77
SHCBP1-202ENST00000563219 SPATA31A3Q5VYP0 1347 aa3.97□□□□□ -1.77
SHCBP1-202ENST00000563219 MBD3L4A6NDZ8 208 aaPredicted RBP3.97□□□□□ -1.77
SHCBP1-202ENST00000563219 MBD3L3A6NE82 208 aaPredicted RBP3.97□□□□□ -1.77
SHCBP1-202ENST00000563219 TBC1D4O60343 1298 aa3.97□□□□□ -1.77
SHCBP1-202ENST00000563219 HKR1P10072 659 aa3.97□□□□□ -1.77
SHCBP1-202ENST00000563219 CYP2C9P11712 490 aa3.97□□□□□ -1.77
SHCBP1-202ENST00000563219 CASP5P51878 434 aa3.97□□□□□ -1.77
SHCBP1-202ENST00000563219 VAV2P52735 878 aa3.97□□□□□ -1.77
SHCBP1-202ENST00000563219 UCP3P55916 312 aa3.97□□□□□ -1.77
SHCBP1-202ENST00000563219 RPS7P62081 194 aaKnown RBP3.97□□□□□ -1.77
SHCBP1-202ENST00000563219 BLOC1S1P78537 153 aa3.97□□□□□ -1.77
SHCBP1-202ENST00000563219 MC2RQ01718 297 aa3.97□□□□□ -1.77
SHCBP1-202ENST00000563219 SCAPQ12770 1279 aa3.97□□□□□ -1.77
SHCBP1-202ENST00000563219 STK3Q13188 491 aa3.97□□□□□ -1.77
SHCBP1-202ENST00000563219 RAB32Q13637 225 aa3.97□□□□□ -1.77
SHCBP1-202ENST00000563219 BOP1Q14137 746 aaKnown RBP3.97□□□□□ -1.77
SHCBP1-202ENST00000563219 DHX8Q14562 1220 aaKnown RBP3.97□□□□□ -1.77
SHCBP1-202ENST00000563219 GEN1Q17RS7 908 aa3.97□□□□□ -1.77
SHCBP1-202ENST00000563219 GRAMD1BQ3KR37 738 aa3.97□□□□□ -1.77
SHCBP1-202ENST00000563219 LONRF3Q496Y0 759 aa3.97□□□□□ -1.77
SHCBP1-202ENST00000563219 SLC44A4Q53GD3 710 aa3.97□□□□□ -1.77
SHCBP1-202ENST00000563219 ABHD17BQ5VST6 288 aa3.97□□□□□ -1.77
SHCBP1-202ENST00000563219 TAF2Q6P1X5 1199 aa3.97□□□□□ -1.77
SHCBP1-202ENST00000563219 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.97□□□□□ -1.77
SHCBP1-202ENST00000563219 NSUN7Q8NE18 718 aaKnown RBP3.97□□□□□ -1.77
SHCBP1-202ENST00000563219 FAM46DQ8NEK8 389 aa3.97□□□□□ -1.77
SHCBP1-202ENST00000563219 CAVIN3Q969G5 261 aa3.97□□□□□ -1.77
SHCBP1-202ENST00000563219 MOGAT1Q96PD6 335 aa3.97□□□□□ -1.77
SHCBP1-202ENST00000563219 UNKQ9C0B0 810 aaKnown RBP3.97□□□□□ -1.77
SHCBP1-202ENST00000563219 COL20A1Q9P218 1284 aa3.97□□□□□ -1.77
SHCBP1-202ENST00000563219 CORO2BQ9UQ03 480 aa3.97□□□□□ -1.77
SHCBP1-202ENST00000563219 DMTF1Q9Y222 760 aa3.97□□□□□ -1.77
SHCBP1-202ENST00000563219 MTO1Q9Y2Z2 717 aaKnown RBP3.97□□□□□ -1.77
SHCBP1-202ENST00000563219 TMX2Q9Y320 296 aa3.97□□□□□ -1.77
SHCBP1-202ENST00000563219 RAD54BQ9Y620 910 aa3.97□□□□□ -1.77
SHCBP1-202ENST00000563219 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.96□□□□□ -1.78
SHCBP1-202ENST00000563219 UNC119BA6NIH7 251 aa3.96□□□□□ -1.78
SHCBP1-202ENST00000563219 RHPN2P1A8MT19 583 aa3.96□□□□□ -1.78
SHCBP1-202ENST00000563219 MASP2O00187 686 aa3.96□□□□□ -1.78
SHCBP1-202ENST00000563219 IFRD1O00458 451 aaPredicted RBP3.96□□□□□ -1.78
SHCBP1-202ENST00000563219 DCLK1O15075 740 aa3.96□□□□□ -1.78
SHCBP1-202ENST00000563219 VPS4BO75351 444 aa3.96□□□□□ -1.78
SHCBP1-202ENST00000563219 SPDEFO95238 335 aa3.96□□□□□ -1.78
SHCBP1-202ENST00000563219 ATXN1LP0C7T5 689 aaKnown RBP3.96□□□□□ -1.78
SHCBP1-202ENST00000563219 EGR2P11161 476 aaPredicted RBP3.96□□□□□ -1.78
SHCBP1-202ENST00000563219 XRCC6P12956 609 aaKnown RBP eCLIP3.96□□□□□ -1.78
SHCBP1-202ENST00000563219 TYRP1P17643 537 aa3.96□□□□□ -1.78
SHCBP1-202ENST00000563219 PIK3CBP42338 1070 aa3.96□□□□□ -1.78
SHCBP1-202ENST00000563219 GCLCP48506 637 aaPredicted RBP3.96□□□□□ -1.78
SHCBP1-202ENST00000563219 ALDH5A1P51649 535 aaPredicted RBP3.96□□□□□ -1.78
SHCBP1-202ENST00000563219 MRPS21P82921 87 aaKnown RBP3.96□□□□□ -1.78
SHCBP1-202ENST00000563219 FOXI1Q12951 378 aa3.96□□□□□ -1.78
SHCBP1-202ENST00000563219 CHAF1AQ13111 956 aaPredicted RBP3.96□□□□□ -1.78
SHCBP1-202ENST00000563219 IFIT5Q13325 482 aaKnown RBP3.96□□□□□ -1.78
SHCBP1-202ENST00000563219 TP53BP2Q13625 1128 aa3.96□□□□□ -1.78
SHCBP1-202ENST00000563219 PRR16Q569H4 304 aa3.96□□□□□ -1.78
SHCBP1-202ENST00000563219 C3orf38Q5JPI3 329 aa3.96□□□□□ -1.78
SHCBP1-202ENST00000563219 ANO1Q5XXA6 986 aa3.96□□□□□ -1.78
SHCBP1-202ENST00000563219 MICALCLQ6ZW33 695 aa3.96□□□□□ -1.78
SHCBP1-202ENST00000563219 GAS2L3Q86XJ1 694 aa3.96□□□□□ -1.78
SHCBP1-202ENST00000563219 COLGALT2Q8IYK4 626 aa3.96□□□□□ -1.78
SHCBP1-202ENST00000563219 ADGRG5Q8IZF4 528 aa3.96□□□□□ -1.78
SHCBP1-202ENST00000563219 SLC15A4Q8N697 577 aa3.96□□□□□ -1.78
SHCBP1-202ENST00000563219 DNAJC5GQ8N7S2 189 aa3.96□□□□□ -1.78
SHCBP1-202ENST00000563219 RNF31Q96EP0 1072 aa3.96□□□□□ -1.78
SHCBP1-202ENST00000563219 MESP1Q9BRJ9 268 aa3.96□□□□□ -1.78
SHCBP1-202ENST00000563219 UNKLQ9H9P5 680 aaKnown RBP3.96□□□□□ -1.78
SHCBP1-202ENST00000563219 PLCB1Q9NQ66 1216 aa3.96□□□□□ -1.78
SHCBP1-202ENST00000563219 A1CFQ9NQ94 594 aaKnown RBP3.96□□□□□ -1.78
SHCBP1-202ENST00000563219 SACM1LQ9NTJ5 587 aa3.96□□□□□ -1.78
SHCBP1-202ENST00000563219 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.96□□□□□ -1.78
SHCBP1-202ENST00000563219 COX11Q9Y6N1 276 aa3.96□□□□□ -1.78
SHCBP1-202ENST00000563219 CCDC189A1A4V9 331 aa3.95□□□□□ -1.78
SHCBP1-202ENST00000563219 F5H423 210 aaPredicted RBP3.95□□□□□ -1.78
SHCBP1-202ENST00000563219 PYCARD-AS1I3L0S3 204 aa3.95□□□□□ -1.78
SHCBP1-202ENST00000563219 MYO1CO00159 1063 aa3.95□□□□□ -1.78
SHCBP1-202ENST00000563219 TOR1BO14657 336 aa3.95□□□□□ -1.78
SHCBP1-202ENST00000563219 NBNO60934 754 aa3.95□□□□□ -1.78
SHCBP1-202ENST00000563219 ESRRBO95718 433 aa3.95□□□□□ -1.78
SHCBP1-202ENST00000563219 PAX3P23760 479 aa3.95□□□□□ -1.78
SHCBP1-202ENST00000563219 KLRC1P26715 233 aa3.95□□□□□ -1.78
SHCBP1-202ENST00000563219 MPLP40238 635 aa3.95□□□□□ -1.78
SHCBP1-202ENST00000563219 AK2P54819 239 aa3.95□□□□□ -1.78
SHCBP1-202ENST00000563219 LOXL3P58215 753 aa3.95□□□□□ -1.78
SHCBP1-202ENST00000563219 C21orf58P58505 322 aa3.95□□□□□ -1.78
SHCBP1-202ENST00000563219 RPS16P62249 146 aaKnown RBP3.95□□□□□ -1.78
SHCBP1-202ENST00000563219 HTRA4P83105 476 aaPredicted RBP3.95□□□□□ -1.78
SHCBP1-202ENST00000563219 FPGSQ05932 587 aa3.95□□□□□ -1.78
SHCBP1-202ENST00000563219 ZNF543Q08ER8 600 aa3.95□□□□□ -1.78
SHCBP1-202ENST00000563219 DAG1Q14118 895 aa3.95□□□□□ -1.78
SHCBP1-202ENST00000563219 TRIM14Q14142 442 aa3.95□□□□□ -1.78
SHCBP1-202ENST00000563219 IQCB1Q15051 598 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms