RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 GOLGA7BQ2TAP0 167 aa9.93□□□□□ -0.82
LINC00838-201ENST00000562956 TXNRD3NBQ6F5E7 133 aa9.93□□□□□ -0.82
LINC00838-201ENST00000562956 CCDC137Q6PK04 289 aaKnown RBP9.93□□□□□ -0.82
LINC00838-201ENST00000562956 JAMLQ86YT9 394 aa9.93□□□□□ -0.82
LINC00838-201ENST00000562956 CCDC50Q8IVM0 306 aa9.93□□□□□ -0.82
LINC00838-201ENST00000562956 REM2Q8IYK8 340 aaPredicted RBP9.93□□□□□ -0.82
LINC00838-201ENST00000562956 EMC1Q8N766 993 aa9.93□□□□□ -0.82
LINC00838-201ENST00000562956 LPPQ93052 612 aa9.93□□□□□ -0.82
LINC00838-201ENST00000562956 PPP1R10Q96QC0 940 aaKnown RBP9.93□□□□□ -0.82
LINC00838-201ENST00000562956 HEMGNQ9BXL5 484 aa9.93□□□□□ -0.82
LINC00838-201ENST00000562956 METTL5Q9NRN9 209 aaKnown RBP9.93□□□□□ -0.82
LINC00838-201ENST00000562956 CREBZFQ9NS37 354 aa9.93□□□□□ -0.82
LINC00838-201ENST00000562956 TRMT13Q9NUP7 481 aaKnown RBP9.93□□□□□ -0.82
LINC00838-201ENST00000562956 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.93□□□□□ -0.82
LINC00838-201ENST00000562956 CACNG4Q9UBN1 327 aa9.93□□□□□ -0.82
LINC00838-201ENST00000562956 PCYOX1Q9UHG3 505 aa9.93□□□□□ -0.82
LINC00838-201ENST00000562956 DDX20Q9UHI6 824 aaKnown RBP9.93□□□□□ -0.82
LINC00838-201ENST00000562956 XPOTO43592 962 aaKnown RBP9.93□□□□□ -0.82
LINC00838-201ENST00000562956 PDGFRBP09619 1106 aa9.93□□□□□ -0.82
LINC00838-201ENST00000562956 LMO2P25791 158 aa9.93□□□□□ -0.82
LINC00838-201ENST00000562956 COILP38432 576 aaPredicted RBP9.93□□□□□ -0.82
LINC00838-201ENST00000562956 MLH1P40692 756 aa9.93□□□□□ -0.82
LINC00838-201ENST00000562956 KCNJ1P48048 391 aa9.93□□□□□ -0.82
LINC00838-201ENST00000562956 NNTQ13423 1086 aa9.93□□□□□ -0.82
LINC00838-201ENST00000562956 DHX34Q14147 1143 aaKnown RBP9.93□□□□□ -0.82
LINC00838-201ENST00000562956 PIGHQ14442 188 aaPredicted RBP9.93□□□□□ -0.82
LINC00838-201ENST00000562956 ZNF268Q14587 947 aaPredicted RBP9.93□□□□□ -0.82
LINC00838-201ENST00000562956 TTC30AQ86WT1 665 aa9.93□□□□□ -0.82
LINC00838-201ENST00000562956 NIPA2Q8N8Q9 360 aa9.93□□□□□ -0.82
LINC00838-201ENST00000562956 GSTCDQ8NEC7 633 aa9.93□□□□□ -0.82
LINC00838-201ENST00000562956 C1orf54Q8WWF1 131 aa9.93□□□□□ -0.82
LINC00838-201ENST00000562956 RNF25Q96BH1 459 aaPredicted RBP9.93□□□□□ -0.82
LINC00838-201ENST00000562956 TSPAN18Q96SJ8 248 aa9.93□□□□□ -0.82
LINC00838-201ENST00000562956 CFHR5Q9BXR6 569 aa9.93□□□□□ -0.82
LINC00838-201ENST00000562956 GDAP2Q9NXN4 497 aa9.93□□□□□ -0.82
LINC00838-201ENST00000562956 VPS18Q9P253 973 aa9.93□□□□□ -0.82
LINC00838-201ENST00000562956 ADAM21Q9UKJ8 722 aa9.93□□□□□ -0.82
LINC00838-201ENST00000562956 SCN1AP35498 2009 aa9.92□□□□□ -0.82
LINC00838-201ENST00000562956 A8MXQ7 604 aa9.92□□□□□ -0.82
LINC00838-201ENST00000562956 PI4K2BG5E9Z4 385 aa9.92□□□□□ -0.82
LINC00838-201ENST00000562956 AGPSO00116 658 aa9.92□□□□□ -0.82
LINC00838-201ENST00000562956 PSMA2P25787 234 aa9.92□□□□□ -0.82
LINC00838-201ENST00000562956 CD52P31358 61 aa9.92□□□□□ -0.82
LINC00838-201ENST00000562956 PNPLA4P41247 253 aa9.92□□□□□ -0.82
LINC00838-201ENST00000562956 TAF6P49848 677 aa9.92□□□□□ -0.82
LINC00838-201ENST00000562956 LILRA4P59901 499 aa9.92□□□□□ -0.82
LINC00838-201ENST00000562956 ITGA7Q13683 1181 aa9.92□□□□□ -0.82
LINC00838-201ENST00000562956 PKDCCQ504Y2 493 aa9.92□□□□□ -0.82
LINC00838-201ENST00000562956 DUPD1Q68J44 220 aa9.92□□□□□ -0.82
LINC00838-201ENST00000562956 SRLQ86TD4 932 aa9.92□□□□□ -0.82
LINC00838-201ENST00000562956 ARFGAP1Q8N6T3 406 aa9.92□□□□□ -0.82
LINC00838-201ENST00000562956 EIF1ADQ8N9N8 165 aaKnown RBP9.92□□□□□ -0.82
LINC00838-201ENST00000562956 C12orf50Q8NA57 414 aaPredicted RBP9.92□□□□□ -0.82
LINC00838-201ENST00000562956 PCSK9Q8NBP7 692 aaKnown RBP9.92□□□□□ -0.82
LINC00838-201ENST00000562956 EXD1Q8NHP7 514 aa9.92□□□□□ -0.82
LINC00838-201ENST00000562956 ATG4AQ8WYN0 398 aa9.92□□□□□ -0.82
LINC00838-201ENST00000562956 ACSF2Q96CM8 615 aaPredicted RBP9.92□□□□□ -0.82
LINC00838-201ENST00000562956 MCRS1Q96EZ8 462 aa9.92□□□□□ -0.82
LINC00838-201ENST00000562956 PIWIL1Q96J94 861 aaKnown RBP9.92□□□□□ -0.82
LINC00838-201ENST00000562956 ZNF560Q96MR9 790 aa9.92□□□□□ -0.82
LINC00838-201ENST00000562956 ERP44Q9BS26 406 aa9.92□□□□□ -0.82
LINC00838-201ENST00000562956 CHST12Q9NRB3 414 aa9.92□□□□□ -0.82
LINC00838-201ENST00000562956 WDR35Q9P2L0 1181 aa9.92□□□□□ -0.82
LINC00838-201ENST00000562956 R3HDM2Q9Y2K5 976 aaKnown RBP9.92□□□□□ -0.82
LINC00838-201ENST00000562956 PTPN22Q9Y2R2 807 aa9.92□□□□□ -0.82
LINC00838-201ENST00000562956 FAM187AA6NFU0 413 aa9.92□□□□□ -0.82
LINC00838-201ENST00000562956 E5RJQ4 531 aa9.92□□□□□ -0.82
LINC00838-201ENST00000562956 GPR182O15218 404 aa9.92□□□□□ -0.82
LINC00838-201ENST00000562956 MGEA5O60502 916 aa9.92□□□□□ -0.82
LINC00838-201ENST00000562956 GHRP10912 638 aa9.92□□□□□ -0.82
LINC00838-201ENST00000562956 HOXD10P28358 340 aa9.92□□□□□ -0.82
LINC00838-201ENST00000562956 FLT3P36888 993 aa9.92□□□□□ -0.82
LINC00838-201ENST00000562956 GNL1P36915 607 aaPredicted RBP9.92□□□□□ -0.82
LINC00838-201ENST00000562956 GGCXP38435 758 aa9.92□□□□□ -0.82
LINC00838-201ENST00000562956 AARSP49588 968 aaKnown RBP eCLIP9.92□□□□□ -0.82
LINC00838-201ENST00000562956 RGS7P49802 495 aa9.92□□□□□ -0.82
LINC00838-201ENST00000562956 ACLYP53396 1101 aa9.92□□□□□ -0.82
LINC00838-201ENST00000562956 KLF1Q13351 362 aaPredicted RBP9.92□□□□□ -0.82
LINC00838-201ENST00000562956 PMF1Q6P1K2 205 aa9.92□□□□□ -0.82
LINC00838-201ENST00000562956 LIMS2Q7Z4I7 341 aa9.92□□□□□ -0.82
LINC00838-201ENST00000562956 UNC93AQ86WB7 457 aa9.92□□□□□ -0.82
LINC00838-201ENST00000562956 CCDC105Q8IYK2 499 aa9.92□□□□□ -0.82
LINC00838-201ENST00000562956 RAET1EQ8TD07 263 aa9.92□□□□□ -0.82
LINC00838-201ENST00000562956 GAD1Q99259 594 aa9.92□□□□□ -0.82
LINC00838-201ENST00000562956 RAB17Q9H0T7 212 aa9.92□□□□□ -0.82
LINC00838-201ENST00000562956 LRRC19Q9H756 370 aa9.92□□□□□ -0.82
LINC00838-201ENST00000562956 CHST7Q9NS84 486 aa9.92□□□□□ -0.82
LINC00838-201ENST00000562956 PADI3Q9ULW8 664 aa9.92□□□□□ -0.82
LINC00838-201ENST00000562956 TRIP11Q15643 1979 aa9.91□□□□□ -0.82
LINC00838-201ENST00000562956 SYF2O95926 243 aaKnown RBP9.91□□□□□ -0.82
LINC00838-201ENST00000562956 LRPAP1P30533 357 aa9.91□□□□□ -0.82
LINC00838-201ENST00000562956 FAM193AP78312 1265 aa9.91□□□□□ -0.82
LINC00838-201ENST00000562956 ADCY2Q08462 1091 aa9.91□□□□□ -0.82
LINC00838-201ENST00000562956 SNX1Q13596 522 aa9.91□□□□□ -0.82
LINC00838-201ENST00000562956 SV2CQ496J9 727 aa9.91□□□□□ -0.82
LINC00838-201ENST00000562956 FAM102AQ5T9C2 384 aaPredicted RBP9.91□□□□□ -0.82
LINC00838-201ENST00000562956 LRRC38Q5VT99 294 aa9.91□□□□□ -0.82
LINC00838-201ENST00000562956 RNF180Q86T96 592 aa9.91□□□□□ -0.82
LINC00838-201ENST00000562956 APPL2Q8NEU8 664 aa9.91□□□□□ -0.82
LINC00838-201ENST00000562956 RIN2Q8WYP3 895 aaPredicted RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms