RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 TROVE2P10155 538 aaKnown RBP eCLIP7.91□□□□□ -1.14
TCF4-216ENST00000562680 GRK4P32298 578 aa7.91□□□□□ -1.14
TCF4-216ENST00000562680 RGS7P49802 495 aa7.91□□□□□ -1.14
TCF4-216ENST00000562680 CLCN6P51797 869 aa7.91□□□□□ -1.14
TCF4-216ENST00000562680 ATP11AP98196 1134 aa7.91□□□□□ -1.14
TCF4-216ENST00000562680 PPP3CAQ08209 521 aa7.91□□□□□ -1.14
TCF4-216ENST00000562680 ZNF211Q13398 564 aaPredicted RBP7.91□□□□□ -1.14
TCF4-216ENST00000562680 CASP8Q14790 479 aa7.91□□□□□ -1.14
TCF4-216ENST00000562680 KLHL38Q2WGJ6 581 aa7.91□□□□□ -1.14
TCF4-216ENST00000562680 ANO4Q32M45 955 aa7.91□□□□□ -1.14
TCF4-216ENST00000562680 P3H1Q32P28 736 aa7.91□□□□□ -1.14
TCF4-216ENST00000562680 ZNF606Q8WXB4 792 aa7.91□□□□□ -1.14
TCF4-216ENST00000562680 BHMTQ93088 406 aa7.91□□□□□ -1.14
TCF4-216ENST00000562680 CDK5RAP1Q96SZ6 601 aaKnown RBP7.91□□□□□ -1.14
TCF4-216ENST00000562680 HEMGNQ9BXL5 484 aa7.91□□□□□ -1.14
TCF4-216ENST00000562680 DDX47Q9H0S4 455 aaKnown RBP7.91□□□□□ -1.14
TCF4-216ENST00000562680 TJP2Q9UDY2 1190 aa7.91□□□□□ -1.14
TCF4-216ENST00000562680 ADAMTS5Q9UNA0 930 aa7.91□□□□□ -1.14
TCF4-216ENST00000562680 PRG3Q9Y2Y8 225 aaPredicted RBP7.91□□□□□ -1.14
TCF4-216ENST00000562680 RASGRF2O14827 1237 aa7.91□□□□□ -1.14
TCF4-216ENST00000562680 ZNF862O60290 1169 aa7.91□□□□□ -1.14
TCF4-216ENST00000562680 SRGAP2O75044 1071 aa7.91□□□□□ -1.14
TCF4-216ENST00000562680 PEX14O75381 377 aa7.91□□□□□ -1.14
TCF4-216ENST00000562680 AP1G2O75843 785 aa7.91□□□□□ -1.14
TCF4-216ENST00000562680 KRT14P02533 472 aa7.91□□□□□ -1.14
TCF4-216ENST00000562680 ALDH2P05091 517 aa7.91□□□□□ -1.14
TCF4-216ENST00000562680 ADRB2P07550 413 aa7.91□□□□□ -1.14
TCF4-216ENST00000562680 ARL1P40616 181 aaPredicted RBP7.91□□□□□ -1.14
TCF4-216ENST00000562680 BBS9Q3SYG4 887 aa7.91□□□□□ -1.14
TCF4-216ENST00000562680 CAPRIN2Q6IMN6 1127 aaKnown RBP7.91□□□□□ -1.14
TCF4-216ENST00000562680 SYT15Q9BQS2 421 aa7.91□□□□□ -1.14
TCF4-216ENST00000562680 CATSPERBQ9H7T0 1116 aa7.91□□□□□ -1.14
TCF4-216ENST00000562680 SNX24Q9Y343 169 aa7.91□□□□□ -1.14
TCF4-216ENST00000562680 COL24A1Q17RW2 1714 aa7.91□□□□□ -1.14
TCF4-216ENST00000562680 BTNL10A8MVZ5 291 aa7.91□□□□□ -1.14
TCF4-216ENST00000562680 DHX15O43143 795 aaKnown RBP7.91□□□□□ -1.14
TCF4-216ENST00000562680 PIGRP01833 764 aa7.91□□□□□ -1.14
TCF4-216ENST00000562680 MMEP08473 750 aa7.91□□□□□ -1.14
TCF4-216ENST00000562680 BLVRAP53004 296 aa7.91□□□□□ -1.14
TCF4-216ENST00000562680 KCNA1Q09470 495 aa7.91□□□□□ -1.14
TCF4-216ENST00000562680 PDK1Q15118 436 aa7.91□□□□□ -1.14
TCF4-216ENST00000562680 ZBTB45Q96K62 511 aaPredicted RBP7.91□□□□□ -1.14
TCF4-216ENST00000562680 POP1Q99575 1024 aaKnown RBP7.91□□□□□ -1.14
TCF4-216ENST00000562680 THAP2Q9H0W7 228 aa7.91□□□□□ -1.14
TCF4-216ENST00000562680 BFARQ9NZS9 450 aa7.91□□□□□ -1.14
TCF4-216ENST00000562680 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.91□□□□□ -1.14
TCF4-216ENST00000562680 FAN1Q9Y2M0 1017 aa7.91□□□□□ -1.14
TCF4-216ENST00000562680 IQANK1A0A1B0GTG1 560 aa7.9□□□□□ -1.14
TCF4-216ENST00000562680 ITIH2P19823 946 aa7.9□□□□□ -1.14
TCF4-216ENST00000562680 PBX1P40424 430 aa7.9□□□□□ -1.14
TCF4-216ENST00000562680 KPNA1P52294 538 aaPredicted RBP7.9□□□□□ -1.14
TCF4-216ENST00000562680 CBWD6Q4V339 395 aa7.9□□□□□ -1.14
TCF4-216ENST00000562680 CBWD3Q5JTY5 395 aa7.9□□□□□ -1.14
TCF4-216ENST00000562680 CBWD5Q5RIA9 395 aa7.9□□□□□ -1.14
TCF4-216ENST00000562680 SWT1Q5T5J6 900 aaKnown RBP7.9□□□□□ -1.14
TCF4-216ENST00000562680 JADE1Q6IE81 842 aa7.9□□□□□ -1.14
TCF4-216ENST00000562680 FAM71AQ8IYT1 594 aa7.9□□□□□ -1.14
TCF4-216ENST00000562680 CCDC110Q8TBZ0 833 aa7.9□□□□□ -1.14
TCF4-216ENST00000562680 ELOVL4Q9GZR5 314 aa7.9□□□□□ -1.14
TCF4-216ENST00000562680 HDAC6Q9UBN7 1215 aa7.9□□□□□ -1.14
TCF4-216ENST00000562680 HEY1Q9Y5J3 304 aa7.9□□□□□ -1.14
TCF4-216ENST00000562680 ARAP2Q8WZ64 1704 aa7.9□□□□□ -1.14
TCF4-216ENST00000562680 KPNA7A9QM74 516 aa7.9□□□□□ -1.14
TCF4-216ENST00000562680 DPYSL4O14531 572 aa7.9□□□□□ -1.14
TCF4-216ENST00000562680 KRT37O76014 449 aa7.9□□□□□ -1.14
TCF4-216ENST00000562680 URODP06132 367 aa7.9□□□□□ -1.14
TCF4-216ENST00000562680 PCK1P35558 622 aa7.9□□□□□ -1.14
TCF4-216ENST00000562680 RECQLP46063 649 aaPredicted RBP7.9□□□□□ -1.14
TCF4-216ENST00000562680 ALDH1A3P47895 512 aa7.9□□□□□ -1.14
TCF4-216ENST00000562680 EIF3EP60228 445 aaKnown RBP7.9□□□□□ -1.14
TCF4-216ENST00000562680 PPP2R5DQ14738 602 aa7.9□□□□□ -1.14
TCF4-216ENST00000562680 TDRD10Q5VZ19 366 aaKnown RBP7.9□□□□□ -1.14
TCF4-216ENST00000562680 ACOT1Q86TX2 421 aa7.9□□□□□ -1.14
TCF4-216ENST00000562680 RASAL3Q86YV0 1011 aa7.9□□□□□ -1.14
TCF4-216ENST00000562680 CCT6BQ92526 530 aa7.9□□□□□ -1.14
TCF4-216ENST00000562680 TATDN2Q93075 761 aa7.9□□□□□ -1.14
TCF4-216ENST00000562680 GDAP1L1Q96MZ0 367 aa7.9□□□□□ -1.14
TCF4-216ENST00000562680 PLEKHA4Q9H4M7 779 aa7.9□□□□□ -1.14
TCF4-216ENST00000562680 ABCB6Q9NP58 842 aa7.9□□□□□ -1.14
TCF4-216ENST00000562680 NFU1Q9UMS0 254 aa7.9□□□□□ -1.14
TCF4-216ENST00000562680 EXOC1LA0A1B0GW35 172 aa7.9□□□□□ -1.14
TCF4-216ENST00000562680 AMHP03971 560 aa7.9□□□□□ -1.14
TCF4-216ENST00000562680 PLEKP08567 350 aaPredicted RBP7.9□□□□□ -1.14
TCF4-216ENST00000562680 RAG1P15918 1043 aa7.9□□□□□ -1.14
TCF4-216ENST00000562680 PDE1BQ01064 536 aa7.9□□□□□ -1.14
TCF4-216ENST00000562680 RAD51Q06609 339 aa7.9□□□□□ -1.14
TCF4-216ENST00000562680 THOC5Q13769 683 aaKnown RBP7.9□□□□□ -1.14
TCF4-216ENST00000562680 GKAP1Q5VSY0 366 aaPredicted RBP7.9□□□□□ -1.14
TCF4-216ENST00000562680 OVOS1Q6IE37 1185 aa7.9□□□□□ -1.14
TCF4-216ENST00000562680 CYP4F22Q6NT55 531 aa7.9□□□□□ -1.14
TCF4-216ENST00000562680 MCOLN2Q8IZK6 566 aa7.9□□□□□ -1.14
TCF4-216ENST00000562680 EXD1Q8NHP7 514 aa7.9□□□□□ -1.14
TCF4-216ENST00000562680 FBF1Q8TES7 1133 aa7.9□□□□□ -1.14
TCF4-216ENST00000562680 RNPEPQ9H4A4 650 aa7.9□□□□□ -1.14
TCF4-216ENST00000562680 DMAC2Q9NW81 257 aa7.9□□□□□ -1.14
TCF4-216ENST00000562680 PGK1P00558 417 aa7.9□□□□□ -1.15
TCF4-216ENST00000562680 ASS1P00966 412 aaKnown RBP7.9□□□□□ -1.15
TCF4-216ENST00000562680 CYBBP04839 570 aa7.9□□□□□ -1.15
TCF4-216ENST00000562680 NME3Q13232 169 aa7.9□□□□□ -1.15
TCF4-216ENST00000562680 ZNF792Q3KQV3 632 aa7.9□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms