RNA–Protein interactions for RNA: ENST00000562670.5

CLK3-209, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-209ENST00000562670 ZNF365Q70YC5 407 aa14.74□□□□□ -0.05
CLK3-209ENST00000562670 SLFN11Q7Z7L1 901 aa14.74□□□□□ -0.05
CLK3-209ENST00000562670 ERICH1Q86X53 443 aa14.74□□□□□ -0.05
CLK3-209ENST00000562670 SYCE1Q8N0S2 351 aa14.74□□□□□ -0.05
CLK3-209ENST00000562670 FUKQ8N0W3 1084 aa14.74□□□□□ -0.05
CLK3-209ENST00000562670 SLC35F6Q8N357 371 aa14.74□□□□□ -0.05
CLK3-209ENST00000562670 LRRC57Q8N9N7 239 aa14.74□□□□□ -0.05
CLK3-209ENST00000562670 C3orf20Q8ND61 904 aa14.74□□□□□ -0.05
CLK3-209ENST00000562670 TPCN2Q8NHX9 752 aa14.74□□□□□ -0.05
CLK3-209ENST00000562670 SLC35G2Q8TBE7 412 aa14.74□□□□□ -0.05
CLK3-209ENST00000562670 SLC35F5Q8WV83 523 aa14.74□□□□□ -0.05
CLK3-209ENST00000562670 C11orf70Q9BRQ4 267 aa14.74□□□□□ -0.05
CLK3-209ENST00000562670 MRPL47Q9HD33 250 aaKnown RBP14.74□□□□□ -0.05
CLK3-209ENST00000562670 CRTAC1Q9NQ79 661 aa14.74□□□□□ -0.05
CLK3-209ENST00000562670 FAM49BQ9NUQ9 324 aa14.74□□□□□ -0.05
CLK3-209ENST00000562670 CNOT8Q9UFF9 292 aaKnown RBP14.74□□□□□ -0.05
CLK3-209ENST00000562670 JRKLQ9Y4A0 524 aa14.74□□□□□ -0.05
CLK3-209ENST00000562670 TCRBV5S1A1TA0A578 114 aa14.73□□□□□ -0.05
CLK3-209ENST00000562670 GRID2IPA4D2P6 1211 aa14.73□□□□□ -0.05
CLK3-209ENST00000562670 OR6C75A6NL08 312 aa14.73□□□□□ -0.05
CLK3-209ENST00000562670 I3L4J1 428 aa14.73□□□□□ -0.05
CLK3-209ENST00000562670 XPO1O14980 1071 aaKnown RBP14.73□□□□□ -0.05
CLK3-209ENST00000562670 FANCGO15287 622 aa14.73□□□□□ -0.05
CLK3-209ENST00000562670 HCRTO43612 131 aa14.73□□□□□ -0.05
CLK3-209ENST00000562670 MOCS3O95396 460 aa14.73□□□□□ -0.05
CLK3-209ENST00000562670 NPR3P17342 541 aa14.73□□□□□ -0.05
CLK3-209ENST00000562670 RRM1P23921 792 aa14.73□□□□□ -0.05
CLK3-209ENST00000562670 TKTP29401 623 aaKnown RBP14.73□□□□□ -0.05
CLK3-209ENST00000562670 PPM1AP35813 382 aa14.73□□□□□ -0.05
CLK3-209ENST00000562670 SCNN1AP37088 669 aa14.73□□□□□ -0.05
CLK3-209ENST00000562670 PLA2G4AP47712 749 aa14.73□□□□□ -0.05
CLK3-209ENST00000562670 SLC8A3P57103 927 aa14.73□□□□□ -0.05
CLK3-209ENST00000562670 PSMC1P62191 440 aaKnown RBP14.73□□□□□ -0.05
CLK3-209ENST00000562670 RASIP1Q5U651 963 aa14.73□□□□□ -0.05
CLK3-209ENST00000562670 KIAA0319Q5VV43 1072 aa14.73□□□□□ -0.05
CLK3-209ENST00000562670 ZNF280DQ6N043 979 aa14.73□□□□□ -0.05
CLK3-209ENST00000562670 MMS22LQ6ZRQ5 1243 aa14.73□□□□□ -0.05
CLK3-209ENST00000562670 OTOP2Q7RTS6 562 aa14.73□□□□□ -0.05
CLK3-209ENST00000562670 DNAAF5Q86Y56 855 aa14.73□□□□□ -0.05
CLK3-209ENST00000562670 ZDHHC17Q8IUH5 632 aa14.73□□□□□ -0.05
CLK3-209ENST00000562670 GPR65Q8IYL9 337 aa14.73□□□□□ -0.05
CLK3-209ENST00000562670 SLC2A14Q8TDB8 520 aa14.73□□□□□ -0.05
CLK3-209ENST00000562670 SP7Q8TDD2 431 aaPredicted RBP14.73□□□□□ -0.05
CLK3-209ENST00000562670 IPO4Q8TEX9 1081 aaKnown RBP14.73□□□□□ -0.05
CLK3-209ENST00000562670 IGSF21Q96ID5 467 aa14.73□□□□□ -0.05
CLK3-209ENST00000562670 HSFY1Q96LI6 401 aa14.73□□□□□ -0.05
CLK3-209ENST00000562670 ZNF558Q96NG5 402 aa14.73□□□□□ -0.05
CLK3-209ENST00000562670 NAPGQ99747 312 aaPredicted RBP14.73□□□□□ -0.05
CLK3-209ENST00000562670 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.73□□□□□ -0.051e-9■■■□□ 16.7
CLK3-209ENST00000562670 SLC4A5Q9BY07 1137 aa14.73□□□□□ -0.05
CLK3-209ENST00000562670 PARVAQ9NVD7 372 aa14.73□□□□□ -0.05
CLK3-209ENST00000562670 HCSTQ9UBK5 93 aa14.73□□□□□ -0.05
CLK3-209ENST00000562670 DNAI1Q9UI46 699 aa14.73□□□□□ -0.05
CLK3-209ENST00000562670 CYTH4Q9UIA0 394 aa14.73□□□□□ -0.05
CLK3-209ENST00000562670 PAXBP1Q9Y5B6 917 aa14.73□□□□□ -0.05
CLK3-209ENST00000562670 TIMM13Q9Y5L4 95 aaPredicted RBP14.73□□□□□ -0.05
CLK3-209ENST00000562670 VWA8A3KMH1 1905 aa14.72□□□□□ -0.05
CLK3-209ENST00000562670 CTAGE9A4FU28 777 aa14.72□□□□□ -0.05
CLK3-209ENST00000562670 CCDC130P13994 396 aa14.72□□□□□ -0.05
CLK3-209ENST00000562670 ACAT1P24752 427 aaKnown RBP14.72□□□□□ -0.05
CLK3-209ENST00000562670 CASQ1P31415 396 aa14.72□□□□□ -0.05
CLK3-209ENST00000562670 ACADSBP45954 432 aa14.72□□□□□ -0.05
CLK3-209ENST00000562670 EPHB4P54760 987 aa14.72□□□□□ -0.05
CLK3-209ENST00000562670 SMARCB1Q12824 385 aa14.72□□□□□ -0.05
CLK3-209ENST00000562670 TUBB2AQ13885 445 aa14.72□□□□□ -0.05
CLK3-209ENST00000562670 BTG3Q14201 252 aaPredicted RBP14.72□□□□□ -0.05
CLK3-209ENST00000562670 ZNF268Q14587 947 aaPredicted RBP14.72□□□□□ -0.05
CLK3-209ENST00000562670 MDH1BQ5I0G3 518 aa14.72□□□□□ -0.05
CLK3-209ENST00000562670 VARS2Q5ST30 1063 aaKnown RBP14.72□□□□□ -0.05
CLK3-209ENST00000562670 PPP1R15BQ5SWA1 713 aa14.72□□□□□ -0.05
CLK3-209ENST00000562670 KCNT2Q6UVM3 1135 aa14.72□□□□□ -0.05
CLK3-209ENST00000562670 PAQR9Q6ZVX9 377 aa14.72□□□□□ -0.05
CLK3-209ENST00000562670 ANKS3Q6ZW76 656 aa14.72□□□□□ -0.05
CLK3-209ENST00000562670 TMEM110Q86TL2 294 aa14.72□□□□□ -0.05
CLK3-209ENST00000562670 FAM35AQ86V20 835 aa14.72□□□□□ -0.05
CLK3-209ENST00000562670 SLC39A11Q8N1S5 342 aa14.72□□□□□ -0.05
CLK3-209ENST00000562670 OR10T2Q8NGX3 314 aa14.72□□□□□ -0.05
CLK3-209ENST00000562670 ZNF564Q8TBZ8 553 aaPredicted RBP14.72□□□□□ -0.05
CLK3-209ENST00000562670 C18orf8Q96DM3 657 aa14.72□□□□□ -0.05
CLK3-209ENST00000562670 SMARCD1Q96GM5 515 aa14.72□□□□□ -0.05
CLK3-209ENST00000562670 PCED1BQ96HM7 432 aa14.72□□□□□ -0.05
CLK3-209ENST00000562670 FUBP3Q96I24 572 aaKnown RBP eCLIP14.72□□□□□ -0.05
CLK3-209ENST00000562670 CPXM1Q96SM3 734 aa14.72□□□□□ -0.05
CLK3-209ENST00000562670 YME1L1Q96TA2 773 aa14.72□□□□□ -0.05
CLK3-209ENST00000562670 LBHD1Q9BQE6 289 aaPredicted RBP14.72□□□□□ -0.05
CLK3-209ENST00000562670 TUBB2BQ9BVA1 445 aa14.72□□□□□ -0.05
CLK3-209ENST00000562670 NUP85Q9BW27 656 aa14.72□□□□□ -0.05
CLK3-209ENST00000562670 DUSP16Q9BY84 665 aa14.72□□□□□ -0.05
CLK3-209ENST00000562670 GPR62Q9BZJ7 368 aa14.72□□□□□ -0.05
CLK3-209ENST00000562670 UBXN6Q9BZV1 441 aa14.72□□□□□ -0.05
CLK3-209ENST00000562670 ZCWPW1Q9H0M4 648 aa14.72□□□□□ -0.05
CLK3-209ENST00000562670 CSNK1G1Q9HCP0 422 aa14.72□□□□□ -0.05
CLK3-209ENST00000562670 ABCB6Q9NP58 842 aa14.72□□□□□ -0.05
CLK3-209ENST00000562670 PNPLA8Q9NP80 782 aa14.72□□□□□ -0.05
CLK3-209ENST00000562670 CTTNBP2NLQ9P2B4 639 aa14.72□□□□□ -0.05
CLK3-209ENST00000562670 COG5Q9UP83 839 aa14.72□□□□□ -0.05
CLK3-209ENST00000562670 PTPRDP23468 1912 aa14.71□□□□□ -0.05
CLK3-209ENST00000562670 MYBPHLA2RUH7 354 aa14.71□□□□□ -0.05
CLK3-209ENST00000562670 ZBBXA8MT70 800 aa14.71□□□□□ -0.05
CLK3-209ENST00000562670 H7C4K7 107 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms