RNA–Protein interactions for RNA: ENST00000562610.5

COMMD4-206, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-206ENST00000562610 CDH8P55286 799 aa17.22■□□□□ 0.35
COMMD4-206ENST00000562610 RPL10AP62906 217 aaKnown RBP17.22■□□□□ 0.35
COMMD4-206ENST00000562610 DDR2Q16832 855 aa17.22■□□□□ 0.35
COMMD4-206ENST00000562610 CFAP221Q4G0U5 840 aa17.22■□□□□ 0.35
COMMD4-206ENST00000562610 SDHAF4Q5VUM1 108 aa17.22■□□□□ 0.35
COMMD4-206ENST00000562610 KRT39Q6A163 491 aa17.22■□□□□ 0.35
COMMD4-206ENST00000562610 FAM171BQ6P995 826 aa17.22■□□□□ 0.35
COMMD4-206ENST00000562610 SUGP1Q8IWZ8 645 aaKnown RBP17.22■□□□□ 0.35
COMMD4-206ENST00000562610 TRIML1Q8N9V2 468 aa17.22■□□□□ 0.35
COMMD4-206ENST00000562610 LRRC3Q9BY71 257 aa17.22■□□□□ 0.35
COMMD4-206ENST00000562610 DPEP3Q9H4B8 488 aa17.22■□□□□ 0.35
COMMD4-206ENST00000562610 KIAA1468Q9P260 1216 aa17.22■□□□□ 0.35
COMMD4-206ENST00000562610 MAGEC2Q9UBF1 373 aaPredicted RBP17.22■□□□□ 0.35
COMMD4-206ENST00000562610 MAGED2Q9UNF1 606 aaPredicted RBP17.22■□□□□ 0.35
COMMD4-206ENST00000562610 PPP1R3GB7ZBB8 358 aa17.21■□□□□ 0.35
COMMD4-206ENST00000562610 SRFP11831 508 aa17.21■□□□□ 0.35
COMMD4-206ENST00000562610 BDNFP23560 247 aa17.21■□□□□ 0.35
COMMD4-206ENST00000562610 CDC25CP30307 473 aa17.21■□□□□ 0.35
COMMD4-206ENST00000562610 GTF2H1P32780 548 aa17.21■□□□□ 0.35
COMMD4-206ENST00000562610 STX17P56962 302 aa17.21■□□□□ 0.35
COMMD4-206ENST00000562610 PAK1Q13153 545 aa17.21■□□□□ 0.35
COMMD4-206ENST00000562610 CCDC40Q4G0X9 1142 aa17.21■□□□□ 0.35
COMMD4-206ENST00000562610 ARHGAP15Q53QZ3 475 aa17.21■□□□□ 0.35
COMMD4-206ENST00000562610 CLEC17AQ6ZS10 378 aa17.21■□□□□ 0.35
COMMD4-206ENST00000562610 B3GALNT2Q8NCR0 500 aa17.21■□□□□ 0.35
COMMD4-206ENST00000562610 MYCBPAPQ8TBZ2 947 aa17.21■□□□□ 0.35
COMMD4-206ENST00000562610 PCED1BQ96HM7 432 aa17.21■□□□□ 0.35
COMMD4-206ENST00000562610 RPP25Q9BUL9 199 aaKnown RBP17.21■□□□□ 0.35
COMMD4-206ENST00000562610 SDCBP2Q9H190 292 aa17.21■□□□□ 0.35
COMMD4-206ENST00000562610 ATXN3LQ9H3M9 355 aa17.21■□□□□ 0.35
COMMD4-206ENST00000562610 MFSD1Q9H3U5 465 aa17.21■□□□□ 0.35
COMMD4-206ENST00000562610 CLSTN2Q9H4D0 955 aa17.21■□□□□ 0.35
COMMD4-206ENST00000562610 ARMCX3Q9UH62 379 aaPredicted RBP17.21■□□□□ 0.35
COMMD4-206ENST00000562610 COL4A2P08572 1712 aa17.21■□□□□ 0.35
COMMD4-206ENST00000562610 ZNF318Q5VUA4 2279 aa17.21■□□□□ 0.34
COMMD4-206ENST00000562610 PDGFBP01127 241 aaPredicted RBP17.2■□□□□ 0.34
COMMD4-206ENST00000562610 FAM163BP0C2L3 166 aa17.2■□□□□ 0.34
COMMD4-206ENST00000562610 CSH1P0DML2 217 aa17.2■□□□□ 0.34
COMMD4-206ENST00000562610 CSH2P0DML3 217 aa17.2■□□□□ 0.34
COMMD4-206ENST00000562610 PTPN1P18031 435 aaKnown RBP17.2■□□□□ 0.34
COMMD4-206ENST00000562610 COL9A1P20849 921 aa17.2■□□□□ 0.34
COMMD4-206ENST00000562610 ANXA13P27216 316 aa17.2■□□□□ 0.34
COMMD4-206ENST00000562610 ASPAP45381 313 aa17.2■□□□□ 0.34
COMMD4-206ENST00000562610 CYP4F8P98187 520 aa17.2■□□□□ 0.34
COMMD4-206ENST00000562610 FAM78AQ5JUQ0 283 aa17.2■□□□□ 0.34
COMMD4-206ENST00000562610 STXBP5Q5T5C0 1151 aa17.2■□□□□ 0.34
COMMD4-206ENST00000562610 TTI2Q6NXR4 508 aa17.2■□□□□ 0.34
COMMD4-206ENST00000562610 POTEHQ6S545 545 aa17.2■□□□□ 0.34
COMMD4-206ENST00000562610 GAREM2Q75VX8 874 aa17.2■□□□□ 0.34
COMMD4-206ENST00000562610 FBXL13Q8NEE6 735 aa17.2■□□□□ 0.34
COMMD4-206ENST00000562610 ZSCAN18Q8TBC5 510 aaPredicted RBP17.2■□□□□ 0.34
COMMD4-206ENST00000562610 ZSWIM3Q96MP5 696 aa17.2■□□□□ 0.34
COMMD4-206ENST00000562610 CEP63Q96MT8 703 aa17.2■□□□□ 0.34
COMMD4-206ENST00000562610 ASB16Q96NS5 453 aa17.2■□□□□ 0.34
COMMD4-206ENST00000562610 NIF3L1Q9GZT8 377 aa17.2■□□□□ 0.34
COMMD4-206ENST00000562610 NUP62CLQ9H1M0 184 aa17.2■□□□□ 0.34
COMMD4-206ENST00000562610 CA14Q9ULX7 337 aa17.2■□□□□ 0.34
COMMD4-206ENST00000562610 HCN4Q9Y3Q4 1203 aa17.2■□□□□ 0.34
COMMD4-206ENST00000562610 COL4A3Q01955 1670 aa17.2■□□□□ 0.34
COMMD4-206ENST00000562610 ECI2O75521 394 aa17.19■□□□□ 0.34
COMMD4-206ENST00000562610 GRIK1P39086 918 aa17.19■□□□□ 0.34
COMMD4-206ENST00000562610 MAGEA11P43364 429 aa17.19■□□□□ 0.34
COMMD4-206ENST00000562610 ORC1Q13415 861 aa17.19■□□□□ 0.34
COMMD4-206ENST00000562610 GPR158Q5T848 1215 aa17.19■□□□□ 0.34
COMMD4-206ENST00000562610 VSTM1Q6UX27 236 aa17.19■□□□□ 0.34
COMMD4-206ENST00000562610 BMP8AQ7Z5Y6 402 aa17.19■□□□□ 0.34
COMMD4-206ENST00000562610 FBXL6Q8N531 539 aa17.19■□□□□ 0.34
COMMD4-206ENST00000562610 SMARCD2Q92925 531 aa17.19■□□□□ 0.34
COMMD4-206ENST00000562610 TNIP3Q96KP6 325 aa17.19■□□□□ 0.34
COMMD4-206ENST00000562610 DUSP9Q99956 384 aaKnown RBP17.19■□□□□ 0.34
COMMD4-206ENST00000562610 MED10Q9BTT4 135 aa17.19■□□□□ 0.34
COMMD4-206ENST00000562610 GPR88Q9GZN0 384 aa17.19■□□□□ 0.34
COMMD4-206ENST00000562610 METTL14Q9HCE5 456 aaKnown RBP17.19■□□□□ 0.34
COMMD4-206ENST00000562610 ZFP14Q9HCL3 533 aa17.19■□□□□ 0.34
COMMD4-206ENST00000562610 LMBRD1Q9NUN5 540 aa17.19■□□□□ 0.34
COMMD4-206ENST00000562610 ATP8B3O60423 1300 aa17.19■□□□□ 0.34
COMMD4-206ENST00000562610 SLC38A8A6NNN8 435 aa17.18■□□□□ 0.34
COMMD4-206ENST00000562610 GOLGA6L22H0YM25 854 aa17.18■□□□□ 0.34
COMMD4-206ENST00000562610 LRRN2O75325 713 aa17.18■□□□□ 0.34
COMMD4-206ENST00000562610 HMGA1P17096 107 aaKnown RBP17.18■□□□□ 0.34
COMMD4-206ENST00000562610 CD58P19256 250 aa17.18■□□□□ 0.34
COMMD4-206ENST00000562610 TRIM21P19474 475 aaKnown RBP17.18■□□□□ 0.34
COMMD4-206ENST00000562610 RFX1P22670 979 aa17.18■□□□□ 0.34
COMMD4-206ENST00000562610 FCARP24071 287 aa17.18■□□□□ 0.34
COMMD4-206ENST00000562610 NDST1P52848 882 aa17.18■□□□□ 0.34
COMMD4-206ENST00000562610 GRM2Q14416 872 aa17.18■□□□□ 0.34
COMMD4-206ENST00000562610 CBWD6Q4V339 395 aa17.18■□□□□ 0.34
COMMD4-206ENST00000562610 CBWD3Q5JTY5 395 aa17.18■□□□□ 0.34
COMMD4-206ENST00000562610 CBWD5Q5RIA9 395 aa17.18■□□□□ 0.34
COMMD4-206ENST00000562610 TANGO2Q6ICL3 276 aa17.18■□□□□ 0.34
COMMD4-206ENST00000562610 ACOT1Q86TX2 421 aa17.18■□□□□ 0.34
COMMD4-206ENST00000562610 SIX5Q8N196 739 aa17.18■□□□□ 0.34
COMMD4-206ENST00000562610 ELSPBP1Q96BH3 223 aa17.18■□□□□ 0.34
COMMD4-206ENST00000562610 BCO2Q9BYV7 579 aa17.18■□□□□ 0.34
COMMD4-206ENST00000562610 ZNF518BQ9C0D4 1074 aa17.18■□□□□ 0.34
COMMD4-206ENST00000562610 ELOVL4Q9GZR5 314 aa17.18■□□□□ 0.34
COMMD4-206ENST00000562610 IL21Q9HBE4 155 aa17.18■□□□□ 0.34
COMMD4-206ENST00000562610 APOBEC3GQ9HC16 384 aaKnown RBP17.18■□□□□ 0.34
COMMD4-206ENST00000562610 UXTQ9UBK9 157 aaPredicted RBP17.18■□□□□ 0.34
COMMD4-206ENST00000562610 HMGXB4Q9UGU5 601 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms