RNA–Protein interactions for RNA: ENST00000562602.1

CFDP1-202, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-202ENST00000562602 VGLL3A8MV65 326 aa7.89□□□□□ -1.15
CFDP1-202ENST00000562602 TCP11X1B4DZS4 312 aa7.89□□□□□ -1.15
CFDP1-202ENST00000562602 ALOX15BO15296 676 aa7.89□□□□□ -1.15
CFDP1-202ENST00000562602 LIASO43766 372 aa7.89□□□□□ -1.15
CFDP1-202ENST00000562602 ADCY3O60266 1144 aa7.89□□□□□ -1.15
CFDP1-202ENST00000562602 ZNF862O60290 1169 aa7.89□□□□□ -1.15
CFDP1-202ENST00000562602 SPAG6O75602 509 aa7.89□□□□□ -1.15
CFDP1-202ENST00000562602 TOM1L1O75674 476 aa7.89□□□□□ -1.15
CFDP1-202ENST00000562602 AP1G2O75843 785 aa7.89□□□□□ -1.15
CFDP1-202ENST00000562602 DESP17661 470 aa7.89□□□□□ -1.15
CFDP1-202ENST00000562602 CCND1P24385 295 aa7.89□□□□□ -1.15
CFDP1-202ENST00000562602 CDH5P33151 784 aaPredicted RBP7.89□□□□□ -1.15
CFDP1-202ENST00000562602 SSR1P43307 286 aaKnown RBP7.89□□□□□ -1.15
CFDP1-202ENST00000562602 VCPP55072 806 aaKnown RBP7.89□□□□□ -1.15
CFDP1-202ENST00000562602 TGFB2P61812 414 aa7.89□□□□□ -1.15
CFDP1-202ENST00000562602 NOP14P78316 857 aaKnown RBP7.89□□□□□ -1.15
CFDP1-202ENST00000562602 LACTBP83111 547 aaPredicted RBP7.89□□□□□ -1.15
CFDP1-202ENST00000562602 ATP11AP98196 1134 aa7.89□□□□□ -1.15
CFDP1-202ENST00000562602 CXCL9Q07325 125 aa7.89□□□□□ -1.15
CFDP1-202ENST00000562602 BNIP1Q12981 228 aa7.89□□□□□ -1.15
CFDP1-202ENST00000562602 NCOA4Q13772 614 aa7.89□□□□□ -1.15
CFDP1-202ENST00000562602 MXD4Q14582 209 aaPredicted RBP7.89□□□□□ -1.15
CFDP1-202ENST00000562602 KYNUQ16719 465 aa7.89□□□□□ -1.15
CFDP1-202ENST00000562602 KYAT1Q16773 422 aa7.89□□□□□ -1.15
CFDP1-202ENST00000562602 LONRF1Q17RB8 773 aa7.89□□□□□ -1.15
CFDP1-202ENST00000562602 DUOXA2Q1HG44 320 aa7.89□□□□□ -1.15
CFDP1-202ENST00000562602 KLHL38Q2WGJ6 581 aa7.89□□□□□ -1.15
CFDP1-202ENST00000562602 TFDP3Q5H9I0 405 aa7.89□□□□□ -1.15
CFDP1-202ENST00000562602 IER5Q5VY09 327 aa7.89□□□□□ -1.15
CFDP1-202ENST00000562602 TDRD10Q5VZ19 366 aaKnown RBP7.89□□□□□ -1.15
CFDP1-202ENST00000562602 NUGGCQ68CJ6 796 aa7.89□□□□□ -1.15
CFDP1-202ENST00000562602 SNRNP48Q6IEG0 339 aaKnown RBP7.89□□□□□ -1.15
CFDP1-202ENST00000562602 DCUN1D2Q6PH85 259 aa7.89□□□□□ -1.15
CFDP1-202ENST00000562602 TMEM270Q6UE05 265 aa7.89□□□□□ -1.15
CFDP1-202ENST00000562602 VSTM1Q6UX27 236 aa7.89□□□□□ -1.15
CFDP1-202ENST00000562602 C4orf22Q6V702 233 aa7.89□□□□□ -1.15
CFDP1-202ENST00000562602 APOBEC3FQ8IUX4 373 aaKnown RBP7.89□□□□□ -1.15
CFDP1-202ENST00000562602 BRSK2Q8IWQ3 736 aa7.89□□□□□ -1.15
CFDP1-202ENST00000562602 ZBTB8OSQ8IWT0 167 aa7.89□□□□□ -1.15
CFDP1-202ENST00000562602 DHX37Q8IY37 1157 aaKnown RBP7.89□□□□□ -1.15
CFDP1-202ENST00000562602 ALLCQ8N6M5 410 aa7.89□□□□□ -1.15
CFDP1-202ENST00000562602 ZSWIM2Q8NEG5 633 aa7.89□□□□□ -1.15
CFDP1-202ENST00000562602 REPS2Q8NFH8 660 aa7.89□□□□□ -1.15
CFDP1-202ENST00000562602 ZKSCAN4Q969J2 545 aaPredicted RBP7.89□□□□□ -1.15
CFDP1-202ENST00000562602 RSRC1Q96IZ7 334 aaKnown RBP7.89□□□□□ -1.15
CFDP1-202ENST00000562602 TEPSINQ96N21 525 aa7.89□□□□□ -1.15
CFDP1-202ENST00000562602 TGS1Q96RS0 853 aaKnown RBP7.89□□□□□ -1.15
CFDP1-202ENST00000562602 RBM15Q96T37 977 aaKnown RBP eCLIP7.89□□□□□ -1.15
CFDP1-202ENST00000562602 MRPL4Q9BYD3 311 aaKnown RBP7.89□□□□□ -1.15
CFDP1-202ENST00000562602 PITPNM3Q9BZ71 974 aa7.89□□□□□ -1.15
CFDP1-202ENST00000562602 LHX5Q9H2C1 402 aa7.89□□□□□ -1.15
CFDP1-202ENST00000562602 XPNPEP1Q9NQW7 623 aa7.89□□□□□ -1.15
CFDP1-202ENST00000562602 BATF3Q9NR55 127 aa7.89□□□□□ -1.15
CFDP1-202ENST00000562602 ZNF277Q9NRM2 450 aaPredicted RBP7.89□□□□□ -1.15
CFDP1-202ENST00000562602 PPP1R1BQ9UD71 204 aaPredicted RBP7.89□□□□□ -1.15
CFDP1-202ENST00000562602 NAALADL1Q9UQQ1 740 aa7.89□□□□□ -1.15
CFDP1-202ENST00000562602 ZNF148Q9UQR1 794 aa7.89□□□□□ -1.15
CFDP1-202ENST00000562602 ADGRA2Q96PE1 1338 aa7.88□□□□□ -1.15
CFDP1-202ENST00000562602 IGKV6D-21A0A0A0MT36 114 aa7.88□□□□□ -1.15
CFDP1-202ENST00000562602 LRRIQ4A6NIV6 560 aa7.88□□□□□ -1.15
CFDP1-202ENST00000562602 RASA4BC9J798 803 aa7.88□□□□□ -1.15
CFDP1-202ENST00000562602 E7ENQ6 273 aa7.88□□□□□ -1.15
CFDP1-202ENST00000562602 TP73O15350 636 aa7.88□□□□□ -1.15
CFDP1-202ENST00000562602 RASA4O43374 803 aa7.88□□□□□ -1.15
CFDP1-202ENST00000562602 ZWINTO95229 277 aa7.88□□□□□ -1.15
CFDP1-202ENST00000562602 IL18RAPO95256 599 aa7.88□□□□□ -1.15
CFDP1-202ENST00000562602 ATP6V1G2O95670 118 aa7.88□□□□□ -1.15
CFDP1-202ENST00000562602 ASS1P00966 412 aaKnown RBP7.88□□□□□ -1.15
CFDP1-202ENST00000562602 KRT1P04264 644 aa7.88□□□□□ -1.15
CFDP1-202ENST00000562602 P4HA1P13674 534 aa7.88□□□□□ -1.15
CFDP1-202ENST00000562602 ALADP13716 330 aa7.88□□□□□ -1.15
CFDP1-202ENST00000562602 NQO1P15559 274 aaKnown RBP7.88□□□□□ -1.15
CFDP1-202ENST00000562602 CHKAP35790 457 aa7.88□□□□□ -1.15
CFDP1-202ENST00000562602 IFNAR2P48551 515 aa7.88□□□□□ -1.15
CFDP1-202ENST00000562602 ARL4CP56559 192 aa7.88□□□□□ -1.15
CFDP1-202ENST00000562602 SNX16P57768 344 aa7.88□□□□□ -1.15
CFDP1-202ENST00000562602 TRPC3Q13507 836 aa7.88□□□□□ -1.15
CFDP1-202ENST00000562602 TFDP1Q14186 410 aa7.88□□□□□ -1.15
CFDP1-202ENST00000562602 SEPT7Q16181 437 aaKnown RBP7.88□□□□□ -1.15
CFDP1-202ENST00000562602 TMEM132AQ24JP5 1023 aa7.88□□□□□ -1.15
CFDP1-202ENST00000562602 PARP6Q2NL67 630 aa7.88□□□□□ -1.15
CFDP1-202ENST00000562602 P3H1Q32P28 736 aa7.88□□□□□ -1.15
CFDP1-202ENST00000562602 MTERF2Q49AM1 385 aa7.88□□□□□ -1.15
CFDP1-202ENST00000562602 INTS6LQ5JSJ4 861 aaKnown RBP7.88□□□□□ -1.15
CFDP1-202ENST00000562602 ZFYVE27Q5T4F4 411 aa7.88□□□□□ -1.15
CFDP1-202ENST00000562602 FYB2Q5VWT5 728 aa7.88□□□□□ -1.15
CFDP1-202ENST00000562602 SPOCD1Q6ZMY3 1216 aa7.88□□□□□ -1.15
CFDP1-202ENST00000562602 CATSPERGQ6ZRH7 1159 aa7.88□□□□□ -1.15
CFDP1-202ENST00000562602 TAS1R3Q7RTX0 852 aa7.88□□□□□ -1.15
CFDP1-202ENST00000562602 ERICH1Q86X53 443 aa7.88□□□□□ -1.15
CFDP1-202ENST00000562602 PPIL6Q8IXY8 311 aa7.88□□□□□ -1.15
CFDP1-202ENST00000562602 AGGF1Q8N302 714 aaeCLIP7.88□□□□□ -1.15
CFDP1-202ENST00000562602 UBR7Q8N806 425 aa7.88□□□□□ -1.15
CFDP1-202ENST00000562602 ATP11CQ8NB49 1132 aa7.88□□□□□ -1.15
CFDP1-202ENST00000562602 SH3TC2Q8TF17 1288 aa7.88□□□□□ -1.15
CFDP1-202ENST00000562602 ZNF606Q8WXB4 792 aa7.88□□□□□ -1.15
CFDP1-202ENST00000562602 MAML1Q92585 1016 aa7.88□□□□□ -1.15
CFDP1-202ENST00000562602 KLHL29Q96CT2 875 aa7.88□□□□□ -1.15
CFDP1-202ENST00000562602 ATG4CQ96DT6 458 aa7.88□□□□□ -1.15
CFDP1-202ENST00000562602 SLITRK1Q96PX8 696 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms