RNA–Protein interactions for RNA: ENST00000562601.5

CDH13-206, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-206ENST00000562601 CTSAP10619 480 aa6.3□□□□□ -1.4
CDH13-206ENST00000562601 RPL17P18621 184 aaKnown RBP6.3□□□□□ -1.4
CDH13-206ENST00000562601 ADSSP30520 456 aa6.3□□□□□ -1.4
CDH13-206ENST00000562601 HOXD13P35453 343 aa6.3□□□□□ -1.4
CDH13-206ENST00000562601 MAPK8P45983 427 aa6.3□□□□□ -1.4
CDH13-206ENST00000562601 BRCC3P46736 316 aa6.3□□□□□ -1.4
CDH13-206ENST00000562601 PTPN14Q15678 1187 aa6.3□□□□□ -1.4
CDH13-206ENST00000562601 DUSP6Q16828 381 aa6.3□□□□□ -1.4
CDH13-206ENST00000562601 DUOXA2Q1HG44 320 aa6.3□□□□□ -1.4
CDH13-206ENST00000562601 ALG1LQ6GMV1 187 aa6.3□□□□□ -1.4
CDH13-206ENST00000562601 CD300LGQ6UXG3 332 aa6.3□□□□□ -1.4
CDH13-206ENST00000562601 SPATA31D4Q6ZUB0 917 aa6.3□□□□□ -1.4
CDH13-206ENST00000562601 UNC13DQ70J99 1090 aa6.3□□□□□ -1.4
CDH13-206ENST00000562601 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.3□□□□□ -1.4
CDH13-206ENST00000562601 VN1R5Q7Z5H4 357 aa6.3□□□□□ -1.4
CDH13-206ENST00000562601 CEP57Q86XR8 500 aa6.3□□□□□ -1.4
CDH13-206ENST00000562601 NELFCDQ8IXH7 590 aa6.3□□□□□ -1.4
CDH13-206ENST00000562601 C12orf76Q8N812 135 aaPredicted RBP6.3□□□□□ -1.4
CDH13-206ENST00000562601 MRPL43Q8N983 215 aaKnown RBP6.3□□□□□ -1.4
CDH13-206ENST00000562601 TMEM87AQ8NBN3 555 aa6.3□□□□□ -1.4
CDH13-206ENST00000562601 C3orf58Q8NDZ4 430 aa6.3□□□□□ -1.4
CDH13-206ENST00000562601 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.3□□□□□ -1.4
CDH13-206ENST00000562601 FEZF2Q8TBJ5 459 aa6.3□□□□□ -1.4
CDH13-206ENST00000562601 POMGNT1Q8WZA1 660 aa6.3□□□□□ -1.4
CDH13-206ENST00000562601 PABPC5Q96DU9 382 aaKnown RBP6.3□□□□□ -1.4
CDH13-206ENST00000562601 FAM84AQ96KN4 292 aa6.3□□□□□ -1.4
CDH13-206ENST00000562601 NECAB3Q96P71 396 aaPredicted RBP6.3□□□□□ -1.4
CDH13-206ENST00000562601 ST6GALNAC4Q9H4F1 302 aa6.3□□□□□ -1.4
CDH13-206ENST00000562601 RPF1Q9H9Y2 349 aaKnown RBP6.3□□□□□ -1.4
CDH13-206ENST00000562601 NGRNQ9NPE2 291 aaKnown RBP6.3□□□□□ -1.4
CDH13-206ENST00000562601 TOPORSQ9NS56 1045 aaPredicted RBP6.3□□□□□ -1.4
CDH13-206ENST00000562601 CLEC1BQ9P126 229 aa6.3□□□□□ -1.4
CDH13-206ENST00000562601 SEL1LQ9UBV2 794 aa6.3□□□□□ -1.4
CDH13-206ENST00000562601 TUBGCP4Q9UGJ1 667 aa6.3□□□□□ -1.4
CDH13-206ENST00000562601 ADAM28Q9UKQ2 775 aa6.3□□□□□ -1.4
CDH13-206ENST00000562601 AGO2Q9UKV8 859 aaKnown RBP6.3□□□□□ -1.4
CDH13-206ENST00000562601 COG5Q9UP83 839 aa6.3□□□□□ -1.4
CDH13-206ENST00000562601 A0A1W2PQ27 194 aa6.29□□□□□ -1.4
CDH13-206ENST00000562601 A0A1W2PQ64 194 aa6.29□□□□□ -1.4
CDH13-206ENST00000562601 A0A1W2PQD8 194 aa6.29□□□□□ -1.4
CDH13-206ENST00000562601 PODXLO00592 558 aa6.29□□□□□ -1.4
CDH13-206ENST00000562601 CLIC2O15247 247 aa6.29□□□□□ -1.4
CDH13-206ENST00000562601 ADAM23O75077 832 aa6.29□□□□□ -1.4
CDH13-206ENST00000562601 ZNF202O95125 648 aa6.29□□□□□ -1.4
CDH13-206ENST00000562601 SOD2P04179 222 aa6.29□□□□□ -1.4
CDH13-206ENST00000562601 RPN1P04843 607 aaKnown RBP6.29□□□□□ -1.4
CDH13-206ENST00000562601 CLTAP09496 248 aa6.29□□□□□ -1.4
CDH13-206ENST00000562601 CNPP09543 421 aaKnown RBP6.29□□□□□ -1.4
CDH13-206ENST00000562601 WEE2P0C1S8 567 aa6.29□□□□□ -1.4
CDH13-206ENST00000562601 ESRRAP11474 423 aaPredicted RBP6.29□□□□□ -1.4
CDH13-206ENST00000562601 IL9P15248 144 aa6.29□□□□□ -1.4
CDH13-206ENST00000562601 KCNE1P15382 129 aa6.29□□□□□ -1.4
CDH13-206ENST00000562601 EPCAMP16422 314 aa6.29□□□□□ -1.4
CDH13-206ENST00000562601 ITPKAP23677 461 aa6.29□□□□□ -1.4
CDH13-206ENST00000562601 KLRC2P26717 231 aa6.29□□□□□ -1.4
CDH13-206ENST00000562601 NOS3P29474 1203 aa6.29□□□□□ -1.4
CDH13-206ENST00000562601 SCN1AP35498 2009 aa6.29□□□□□ -1.4
CDH13-206ENST00000562601 GRIA4P48058 902 aa6.29□□□□□ -1.4
CDH13-206ENST00000562601 GLUD2P49448 558 aa6.29□□□□□ -1.4
CDH13-206ENST00000562601 PPP2R3AQ06190 1150 aa6.29□□□□□ -1.4
CDH13-206ENST00000562601 PCDH1Q08174 1060 aa6.29□□□□□ -1.4
CDH13-206ENST00000562601 DOC2BQ14184 412 aa6.29□□□□□ -1.4
CDH13-206ENST00000562601 UPP1Q16831 310 aa6.29□□□□□ -1.4
CDH13-206ENST00000562601 LEXMQ3ZCV2 418 aa6.29□□□□□ -1.4
CDH13-206ENST00000562601 XKR4Q5GH76 650 aa6.29□□□□□ -1.4
CDH13-206ENST00000562601 FAM26FQ5R3K3 315 aa6.29□□□□□ -1.4
CDH13-206ENST00000562601 XP32Q5T750 250 aa6.29□□□□□ -1.4
CDH13-206ENST00000562601 FAM171A1Q5VUB5 890 aa6.29□□□□□ -1.4
CDH13-206ENST00000562601 SCARA3Q6AZY7 606 aa6.29□□□□□ -1.4
CDH13-206ENST00000562601 JADE1Q6IE81 842 aa6.29□□□□□ -1.4
CDH13-206ENST00000562601 KIAA1841Q6NSI8 718 aa6.29□□□□□ -1.4
CDH13-206ENST00000562601 FUT10Q6P4F1 479 aa6.29□□□□□ -1.4
CDH13-206ENST00000562601 DCLRE1AQ6PJP8 1040 aa6.29□□□□□ -1.4
CDH13-206ENST00000562601 PRSS55Q6UWB4 352 aaPredicted RBP6.29□□□□□ -1.4
CDH13-206ENST00000562601 CRELD2Q6UXH1 353 aaPredicted RBP6.29□□□□□ -1.4
CDH13-206ENST00000562601 KRBA2Q6ZNG9 492 aa6.29□□□□□ -1.4
CDH13-206ENST00000562601 ACAD11Q709F0 780 aa6.29□□□□□ -1.4
CDH13-206ENST00000562601 PALB2Q86YC2 1186 aa6.29□□□□□ -1.4
CDH13-206ENST00000562601 EFHBQ8N7U6 833 aa6.29□□□□□ -1.4
CDH13-206ENST00000562601 ATXN2LQ8WWM7 1075 aaKnown RBP6.29□□□□□ -1.4
CDH13-206ENST00000562601 RIN2Q8WYP3 895 aaPredicted RBP6.29□□□□□ -1.4
CDH13-206ENST00000562601 RSPH1Q8WYR4 309 aa6.29□□□□□ -1.4
CDH13-206ENST00000562601 ERCC4Q92889 916 aaPredicted RBP6.29□□□□□ -1.4
CDH13-206ENST00000562601 PPP2R3CQ969Q6 453 aa6.29□□□□□ -1.4
CDH13-206ENST00000562601 HVCN1Q96D96 273 aa6.29□□□□□ -1.4
CDH13-206ENST00000562601 KLHDC7BQ96G42 594 aa6.29□□□□□ -1.4
CDH13-206ENST00000562601 KLHL5Q96PQ7 755 aa6.29□□□□□ -1.4
CDH13-206ENST00000562601 PYM1Q9BRP8 204 aaKnown RBP6.29□□□□□ -1.4
CDH13-206ENST00000562601 CBWD1Q9BRT8 395 aa6.29□□□□□ -1.4
CDH13-206ENST00000562601 FAM213AQ9BRX8 229 aa6.29□□□□□ -1.4
CDH13-206ENST00000562601 HERC2P3Q9BVR0 1158 aa6.29□□□□□ -1.4
CDH13-206ENST00000562601 CEP41Q9BYV8 373 aa6.29□□□□□ -1.4
CDH13-206ENST00000562601 MAGEF1Q9HAY2 307 aa6.29□□□□□ -1.4
CDH13-206ENST00000562601 OLFML3Q9NRN5 406 aa6.29□□□□□ -1.4
CDH13-206ENST00000562601 MRPL17Q9NRX2 175 aaKnown RBP6.29□□□□□ -1.4
CDH13-206ENST00000562601 CDH22Q9UJ99 828 aa6.29□□□□□ -1.4
CDH13-206ENST00000562601 CPSF3Q9UKF6 684 aaKnown RBP6.29□□□□□ -1.4
CDH13-206ENST00000562601 EXOC7Q9UPT5 735 aa6.29□□□□□ -1.4
CDH13-206ENST00000562601 STYXL1Q9Y6J8 313 aa6.29□□□□□ -1.4
CDH13-206ENST00000562601 ZMYM2Q9UBW7 1377 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms