RNA–Protein interactions for RNA: ENST00000562404.1

LPCAT4-202, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 3

Gene LPCAT4, Length 577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-202ENST00000562404 NR2F2P24468 414 aa11.86□□□□□ -0.51
LPCAT4-202ENST00000562404 TARSP26639 723 aaKnown RBP11.86□□□□□ -0.51
LPCAT4-202ENST00000562404 PCSK1P29120 753 aa11.86□□□□□ -0.51
LPCAT4-202ENST00000562404 GDI1P31150 447 aa11.86□□□□□ -0.51
LPCAT4-202ENST00000562404 GNL1P36915 607 aaPredicted RBP11.86□□□□□ -0.51
LPCAT4-202ENST00000562404 NLRP12P59046 1061 aa11.86□□□□□ -0.51
LPCAT4-202ENST00000562404 PPP3CAQ08209 521 aa11.86□□□□□ -0.51
LPCAT4-202ENST00000562404 FZD5Q13467 585 aa11.86□□□□□ -0.51
LPCAT4-202ENST00000562404 BIRC3Q13489 604 aa11.86□□□□□ -0.51
LPCAT4-202ENST00000562404 TRPC3Q13507 836 aa11.86□□□□□ -0.51
LPCAT4-202ENST00000562404 NCOA4Q13772 614 aa11.86□□□□□ -0.51
LPCAT4-202ENST00000562404 VEPH1Q14D04 833 aa11.86□□□□□ -0.51
LPCAT4-202ENST00000562404 NFIL3Q16649 462 aa11.86□□□□□ -0.51
LPCAT4-202ENST00000562404 ZACNQ401N2 412 aa11.86□□□□□ -0.51
LPCAT4-202ENST00000562404 CFAP221Q4G0U5 840 aa11.86□□□□□ -0.51
LPCAT4-202ENST00000562404 MDH1BQ5I0G3 518 aa11.86□□□□□ -0.51
LPCAT4-202ENST00000562404 SPOPLQ6IQ16 392 aa11.86□□□□□ -0.51
LPCAT4-202ENST00000562404 SCARA5Q6ZMJ2 495 aa11.86□□□□□ -0.51
LPCAT4-202ENST00000562404 TPRG1Q6ZUI0 275 aa11.86□□□□□ -0.51
LPCAT4-202ENST00000562404 SV2AQ7L0J3 742 aa11.86□□□□□ -0.51
LPCAT4-202ENST00000562404 MFSD6LQ8IWD5 586 aa11.86□□□□□ -0.51
LPCAT4-202ENST00000562404 DTWD2Q8NBA8 298 aa11.86□□□□□ -0.51
LPCAT4-202ENST00000562404 PJA1Q8NG27 643 aa11.86□□□□□ -0.51
LPCAT4-202ENST00000562404 OR6B3Q8NGW1 331 aa11.86□□□□□ -0.51
LPCAT4-202ENST00000562404 SPATA20Q8TB22 786 aa11.86□□□□□ -0.51
LPCAT4-202ENST00000562404 PCED1BQ96HM7 432 aa11.86□□□□□ -0.51
LPCAT4-202ENST00000562404 ZFYVE19Q96K21 471 aa11.86□□□□□ -0.51
LPCAT4-202ENST00000562404 TRMT61BQ9BVS5 477 aaKnown RBP11.86□□□□□ -0.51
LPCAT4-202ENST00000562404 VRTNQ9H8Y1 702 aa11.86□□□□□ -0.51
LPCAT4-202ENST00000562404 ABCB6Q9NP58 842 aa11.86□□□□□ -0.51
LPCAT4-202ENST00000562404 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.86□□□□□ -0.51
LPCAT4-202ENST00000562404 CDH9Q9ULB4 789 aa11.86□□□□□ -0.51
LPCAT4-202ENST00000562404 PCDHA5Q9Y5H7 936 aa11.86□□□□□ -0.51
LPCAT4-202ENST00000562404 ATG2BQ96BY7 2078 aa11.86□□□□□ -0.51
LPCAT4-202ENST00000562404 KANSL1LA0AUZ9 987 aa11.85□□□□□ -0.51
LPCAT4-202ENST00000562404 SLC38A8A6NNN8 435 aa11.85□□□□□ -0.51
LPCAT4-202ENST00000562404 CLDN5O00501 218 aa11.85□□□□□ -0.51
LPCAT4-202ENST00000562404 PHACTR2O75167 634 aa11.85□□□□□ -0.51
LPCAT4-202ENST00000562404 NOL4O94818 638 aa11.85□□□□□ -0.51
LPCAT4-202ENST00000562404 BDNFP23560 247 aa11.85□□□□□ -0.51
LPCAT4-202ENST00000562404 ATICP31939 592 aa11.85□□□□□ -0.51
LPCAT4-202ENST00000562404 PRCPP42785 496 aa11.85□□□□□ -0.51
LPCAT4-202ENST00000562404 PMS1P54277 932 aaKnown RBP11.85□□□□□ -0.51
LPCAT4-202ENST00000562404 USP46P62068 366 aa11.85□□□□□ -0.51
LPCAT4-202ENST00000562404 TNNC1P63316 161 aa11.85□□□□□ -0.51
LPCAT4-202ENST00000562404 FAM160A1Q05DH4 1040 aa11.85□□□□□ -0.51
LPCAT4-202ENST00000562404 FCHO2Q0JRZ9 810 aa11.85□□□□□ -0.51
LPCAT4-202ENST00000562404 WDR44Q5JSH3 913 aa11.85□□□□□ -0.51
LPCAT4-202ENST00000562404 TXNDC8Q6A555 127 aa11.85□□□□□ -0.51
LPCAT4-202ENST00000562404 SPATA2LQ8IUW3 424 aaPredicted RBP11.85□□□□□ -0.51
LPCAT4-202ENST00000562404 SCN4BQ8IWT1 228 aa11.85□□□□□ -0.51
LPCAT4-202ENST00000562404 ZNF687Q8N1G0 1237 aa11.85□□□□□ -0.51
LPCAT4-202ENST00000562404 TMC2Q8TDI7 906 aa11.85□□□□□ -0.51
LPCAT4-202ENST00000562404 FUBP3Q96I24 572 aaKnown RBP eCLIP11.85□□□□□ -0.51
LPCAT4-202ENST00000562404 SLC22A12Q96S37 553 aa11.85□□□□□ -0.51
LPCAT4-202ENST00000562404 PRRX2Q99811 253 aa11.85□□□□□ -0.51
LPCAT4-202ENST00000562404 GPR88Q9GZN0 384 aa11.85□□□□□ -0.51
LPCAT4-202ENST00000562404 TASP1Q9H6P5 420 aa11.85□□□□□ -0.51
LPCAT4-202ENST00000562404 BRD9Q9H8M2 597 aa11.85□□□□□ -0.51
LPCAT4-202ENST00000562404 LTB4R2Q9NPC1 389 aa11.85□□□□□ -0.51
LPCAT4-202ENST00000562404 CCL26Q9Y258 94 aa11.85□□□□□ -0.51
LPCAT4-202ENST00000562404 SIT1Q9Y3P8 196 aa11.85□□□□□ -0.51
LPCAT4-202ENST00000562404 R3HCC1Q9Y3T6 440 aaKnown RBP11.85□□□□□ -0.51
LPCAT4-202ENST00000562404 MYOFQ9NZM1 2061 aa11.84□□□□□ -0.51
LPCAT4-202ENST00000562404 MAPK13O15264 365 aa11.84□□□□□ -0.51
LPCAT4-202ENST00000562404 HLA-DRAP01903 254 aa11.84□□□□□ -0.51
LPCAT4-202ENST00000562404 CSH1P0DML2 217 aa11.84□□□□□ -0.51
LPCAT4-202ENST00000562404 CSH2P0DML3 217 aa11.84□□□□□ -0.51
LPCAT4-202ENST00000562404 PTPN1P18031 435 aaKnown RBP11.84□□□□□ -0.51
LPCAT4-202ENST00000562404 CDC25CP30307 473 aa11.84□□□□□ -0.51
LPCAT4-202ENST00000562404 SOX9P48436 509 aa11.84□□□□□ -0.51
LPCAT4-202ENST00000562404 GCLMP48507 274 aa11.84□□□□□ -0.51
LPCAT4-202ENST00000562404 MRE11P49959 708 aa11.84□□□□□ -0.51
LPCAT4-202ENST00000562404 VAMP7P51809 220 aa11.84□□□□□ -0.51
LPCAT4-202ENST00000562404 NUBP1P53384 320 aa11.84□□□□□ -0.51
LPCAT4-202ENST00000562404 PFKPQ01813 784 aa11.84□□□□□ -0.51
LPCAT4-202ENST00000562404 CYP27A1Q02318 531 aa11.84□□□□□ -0.51
LPCAT4-202ENST00000562404 PRKCQQ04759 706 aa11.84□□□□□ -0.51
LPCAT4-202ENST00000562404 ORC1Q13415 861 aa11.84□□□□□ -0.51
LPCAT4-202ENST00000562404 ADAM9Q13443 819 aa11.84□□□□□ -0.51
LPCAT4-202ENST00000562404 UBXN2BQ14CS0 331 aa11.84□□□□□ -0.51
LPCAT4-202ENST00000562404 ANGPT1Q15389 498 aa11.84□□□□□ -0.51
LPCAT4-202ENST00000562404 ZNF699Q32M78 642 aa11.84□□□□□ -0.51
LPCAT4-202ENST00000562404 ISM2Q6H9L7 571 aa11.84□□□□□ -0.51
LPCAT4-202ENST00000562404 PAQR9Q6ZVX9 377 aa11.84□□□□□ -0.51
LPCAT4-202ENST00000562404 FAM186BQ8IYM0 893 aa11.84□□□□□ -0.51
LPCAT4-202ENST00000562404 MAML2Q8IZL2 1156 aaPredicted RBP11.84□□□□□ -0.51
LPCAT4-202ENST00000562404 MAB21L3Q8N8X9 362 aa11.84□□□□□ -0.51
LPCAT4-202ENST00000562404 TTC8Q8TAM2 541 aa11.84□□□□□ -0.51
LPCAT4-202ENST00000562404 MYCBPAPQ8TBZ2 947 aa11.84□□□□□ -0.51
LPCAT4-202ENST00000562404 DEPDC1BQ8WUY9 529 aa11.84□□□□□ -0.51
LPCAT4-202ENST00000562404 ATOH1Q92858 354 aaPredicted RBP11.84□□□□□ -0.51
LPCAT4-202ENST00000562404 DNASE1L2Q92874 299 aa11.84□□□□□ -0.51
LPCAT4-202ENST00000562404 CCDC47Q96A33 483 aaKnown RBP11.84□□□□□ -0.51
LPCAT4-202ENST00000562404 SYAP1Q96A49 352 aaPredicted RBP11.84□□□□□ -0.51
LPCAT4-202ENST00000562404 MYRFLQ96LU7 910 aa11.84□□□□□ -0.51
LPCAT4-202ENST00000562404 B3GNT5Q9BYG0 378 aa11.84□□□□□ -0.51
LPCAT4-202ENST00000562404 ZNF518BQ9C0D4 1074 aa11.84□□□□□ -0.51
LPCAT4-202ENST00000562404 SNX25Q9H3E2 840 aa11.84□□□□□ -0.51
LPCAT4-202ENST00000562404 APOBEC3GQ9HC16 384 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms