RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 CDKAL1Q5VV42 579 aa17.8■□□□□ 0.44
CLK3-207ENST00000562389 PDZD4Q76G19 769 aaPredicted RBP17.8■□□□□ 0.44
CLK3-207ENST00000562389 ACOT1Q86TX2 421 aa17.8■□□□□ 0.44
CLK3-207ENST00000562389 TMC8Q8IU68 726 aa17.8■□□□□ 0.44
CLK3-207ENST00000562389 PLCD3Q8N3E9 789 aa17.8■□□□□ 0.44
CLK3-207ENST00000562389 EHBP1Q8NDI1 1231 aa17.8■□□□□ 0.44
CLK3-207ENST00000562389 WHAMMQ8TF30 809 aa17.8■□□□□ 0.44
CLK3-207ENST00000562389 TWNKQ96RR1 684 aa17.8■□□□□ 0.44
CLK3-207ENST00000562389 ARID3AQ99856 593 aa17.8■□□□□ 0.44
CLK3-207ENST00000562389 LPIN3Q9BQK8 851 aa17.8■□□□□ 0.44
CLK3-207ENST00000562389 FUCA2Q9BTY2 467 aa17.8■□□□□ 0.44
CLK3-207ENST00000562389 NT5C1AQ9BXI3 368 aa17.8■□□□□ 0.44
CLK3-207ENST00000562389 LRRC3Q9BY71 257 aa17.8■□□□□ 0.44
CLK3-207ENST00000562389 ELOVL4Q9GZR5 314 aa17.8■□□□□ 0.44
CLK3-207ENST00000562389 CISHQ9NSE2 258 aa17.8■□□□□ 0.44
CLK3-207ENST00000562389 ATP8B3O60423 1300 aa17.79■□□□□ 0.44
CLK3-207ENST00000562389 GTPBP10A4D1E9 387 aaKnown RBP17.79■□□□□ 0.44
CLK3-207ENST00000562389 ZNF197O14709 1029 aa17.79■□□□□ 0.44
CLK3-207ENST00000562389 MICAL2O94851 1124 aa17.79■□□□□ 0.44
CLK3-207ENST00000562389 BDNFP23560 247 aa17.79■□□□□ 0.44
CLK3-207ENST00000562389 GBP2P32456 591 aaPredicted RBP17.79■□□□□ 0.44
CLK3-207ENST00000562389 GPR15P49685 360 aa17.79■□□□□ 0.44
CLK3-207ENST00000562389 YWHAEP62258 255 aaKnown RBP17.79■□□□□ 0.44
CLK3-207ENST00000562389 LRMPQ12912 555 aa17.79■□□□□ 0.44
CLK3-207ENST00000562389 SLC5A9Q2M3M2 681 aa17.79■□□□□ 0.44
CLK3-207ENST00000562389 ANO6Q4KMQ2 910 aa17.79■□□□□ 0.44
CLK3-207ENST00000562389 HSP90AA4PQ58FG1 418 aa17.79■□□□□ 0.44
CLK3-207ENST00000562389 TCP11X2Q5H9J9 407 aa17.79■□□□□ 0.44
CLK3-207ENST00000562389 CYP4A22Q5TCH4 519 aa17.79■□□□□ 0.44
CLK3-207ENST00000562389 DNAJB7Q7Z6W7 309 aaPredicted RBP17.79■□□□□ 0.44
CLK3-207ENST00000562389 HS6ST3Q8IZP7 471 aa17.79■□□□□ 0.44
CLK3-207ENST00000562389 ITFG1Q8TB96 612 aa17.79■□□□□ 0.44
CLK3-207ENST00000562389 FAM200AQ8TCP9 573 aa17.79■□□□□ 0.44
CLK3-207ENST00000562389 CEP295NLQ96MC4 621 aa17.79■□□□□ 0.44
CLK3-207ENST00000562389 MYADMQ96S97 322 aa17.79■□□□□ 0.44
CLK3-207ENST00000562389 BPIFA3Q9BQP9 254 aa17.79■□□□□ 0.44
CLK3-207ENST00000562389 TUBGCP2Q9BSJ2 902 aa17.79■□□□□ 0.44
CLK3-207ENST00000562389 B3GNT5Q9BYG0 378 aa17.79■□□□□ 0.44
CLK3-207ENST00000562389 DNAI2Q9GZS0 605 aa17.79■□□□□ 0.44
CLK3-207ENST00000562389 NAT10Q9H0A0 1025 aaKnown RBP17.79■□□□□ 0.44
CLK3-207ENST00000562389 INTS2Q9H0H0 1204 aaKnown RBP17.79■□□□□ 0.44
CLK3-207ENST00000562389 GCNT4Q9P109 453 aa17.79■□□□□ 0.44
CLK3-207ENST00000562389 EPS15L1Q9UBC2 864 aa17.79■□□□□ 0.44
CLK3-207ENST00000562389 MRPS23Q9Y3D9 190 aaKnown RBP17.79■□□□□ 0.44
CLK3-207ENST00000562389 ZFP37Q9Y6Q3 630 aaPredicted RBP17.79■□□□□ 0.44
CLK3-207ENST00000562389 C5orf42Q9H799 3197 aa17.79■□□□□ 0.44
CLK3-207ENST00000562389 OBSL1O75147 1896 aa17.78■□□□□ 0.44
CLK3-207ENST00000562389 VCANP13611 3396 aa17.78■□□□□ 0.44
CLK3-207ENST00000562389 TRIM66O15016 1216 aa17.78■□□□□ 0.44
CLK3-207ENST00000562389 CSH1P0DML2 217 aa17.78■□□□□ 0.44
CLK3-207ENST00000562389 CSH2P0DML3 217 aa17.78■□□□□ 0.44
CLK3-207ENST00000562389 PRKCSHP14314 528 aaPredicted RBP17.78■□□□□ 0.44
CLK3-207ENST00000562389 CCR2P41597 374 aa17.78■□□□□ 0.44
CLK3-207ENST00000562389 ORC1Q13415 861 aa17.78■□□□□ 0.44
CLK3-207ENST00000562389 MIIPQ5JXC2 388 aa17.78■□□□□ 0.44
CLK3-207ENST00000562389 FAM35AQ86V20 835 aa17.78■□□□□ 0.44
CLK3-207ENST00000562389 UBR7Q8N806 425 aa17.78■□□□□ 0.44
CLK3-207ENST00000562389 GIPC2Q8TF65 315 aa17.78■□□□□ 0.44
CLK3-207ENST00000562389 ZNF518BQ9C0D4 1074 aa17.78■□□□□ 0.44
CLK3-207ENST00000562389 NDST4Q9H3R1 872 aa17.78■□□□□ 0.44
CLK3-207ENST00000562389 CDH7Q9ULB5 785 aa17.78■□□□□ 0.44
CLK3-207ENST00000562389 DENND4CQ5VZ89 1909 aa17.78■□□□□ 0.44
CLK3-207ENST00000562389 MYH10P35580 1976 aa17.77■□□□□ 0.44
CLK3-207ENST00000562389 SYCE3A1L190 88 aa17.77■□□□□ 0.44
CLK3-207ENST00000562389 TNFRSF10AO00220 468 aa17.77■□□□□ 0.44
CLK3-207ENST00000562389 FGF19O95750 216 aa17.77■□□□□ 0.44
CLK3-207ENST00000562389 GRIK1P39086 918 aa17.77■□□□□ 0.44
CLK3-207ENST00000562389 GCNT1Q02742 428 aa17.77■□□□□ 0.44
CLK3-207ENST00000562389 NCAPHQ15003 741 aa17.77■□□□□ 0.44
CLK3-207ENST00000562389 DDR2Q16832 855 aa17.77■□□□□ 0.44
CLK3-207ENST00000562389 VWA3BQ502W6 1294 aa17.77■□□□□ 0.44
CLK3-207ENST00000562389 SDHAF4Q5VUM1 108 aa17.77■□□□□ 0.44
CLK3-207ENST00000562389 GBP6Q6ZN66 633 aa17.77■□□□□ 0.44
CLK3-207ENST00000562389 PAQR9Q6ZVX9 377 aa17.77■□□□□ 0.44
CLK3-207ENST00000562389 RNF135Q8IUD6 432 aa17.77■□□□□ 0.44
CLK3-207ENST00000562389 SCN4BQ8IWT1 228 aa17.77■□□□□ 0.44
CLK3-207ENST00000562389 NPAS3Q8IXF0 933 aa17.77■□□□□ 0.44
CLK3-207ENST00000562389 PPM1KQ8N3J5 372 aa17.77■□□□□ 0.44
CLK3-207ENST00000562389 FGF13Q92913 245 aa17.77■□□□□ 0.44
CLK3-207ENST00000562389 TCEAL4Q96EI5 215 aa17.77■□□□□ 0.44
CLK3-207ENST00000562389 SMARCD1Q96GM5 515 aa17.77■□□□□ 0.44
CLK3-207ENST00000562389 SPATA17Q96L03 361 aa17.77■□□□□ 0.44
CLK3-207ENST00000562389 C8orf48Q96LL4 319 aa17.77■□□□□ 0.44
CLK3-207ENST00000562389 ZNF334Q9HCZ1 680 aaPredicted RBP17.77■□□□□ 0.44
CLK3-207ENST00000562389 FANCLQ9NW38 375 aa17.77■□□□□ 0.44
CLK3-207ENST00000562389 PATJQ8NI35 1801 aa17.77■□□□□ 0.43
CLK3-207ENST00000562389 CLDN5O00501 218 aa17.76■□□□□ 0.43
CLK3-207ENST00000562389 MOSPD3O75425 235 aa17.76■□□□□ 0.43
CLK3-207ENST00000562389 NOL4O94818 638 aa17.76■□□□□ 0.43
CLK3-207ENST00000562389 MYL4P12829 197 aa17.76■□□□□ 0.43
CLK3-207ENST00000562389 LAMP2P13473 410 aa17.76■□□□□ 0.43
CLK3-207ENST00000562389 CCDC130P13994 396 aa17.76■□□□□ 0.43
CLK3-207ENST00000562389 HMGA1P17096 107 aaKnown RBP17.76■□□□□ 0.43
CLK3-207ENST00000562389 CEBPBP17676 345 aa17.76■□□□□ 0.43
CLK3-207ENST00000562389 ANXA13P27216 316 aa17.76■□□□□ 0.43
CLK3-207ENST00000562389 RAD23BP54727 409 aa17.76■□□□□ 0.43
CLK3-207ENST00000562389 TAF12Q16514 161 aa17.76■□□□□ 0.43
CLK3-207ENST00000562389 EXOC3L4Q17RC7 722 aa17.76■□□□□ 0.43
CLK3-207ENST00000562389 ZNF394Q53GI3 561 aa17.76■□□□□ 0.43
CLK3-207ENST00000562389 TRIM65Q6PJ69 517 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms