RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 UVRAGQ9P2Y5 699 aa6.95□□□□□ -1.3
CAPN3-210ENST00000561817 RNF14Q9UBS8 474 aa6.95□□□□□ -1.3
CAPN3-210ENST00000561817 TUBGCP4Q9UGJ1 667 aa6.95□□□□□ -1.3
CAPN3-210ENST00000561817 HMGXB4Q9UGU5 601 aa6.95□□□□□ -1.3
CAPN3-210ENST00000561817 CHORDC1Q9UHD1 332 aaPredicted RBP6.95□□□□□ -1.3
CAPN3-210ENST00000561817 RAB21Q9UL25 225 aa6.95□□□□□ -1.3
CAPN3-210ENST00000561817 AGAP1Q9UPQ3 857 aa6.95□□□□□ -1.3
CAPN3-210ENST00000561817 PIN4Q9Y237 131 aaKnown RBP6.95□□□□□ -1.3
CAPN3-210ENST00000561817 GINS2Q9Y248 185 aa6.95□□□□□ -1.3
CAPN3-210ENST00000561817 IPPQ9Y573 584 aa6.95□□□□□ -1.3
CAPN3-210ENST00000561817 CENPFP49454 3210 aa6.95□□□□□ -1.3
CAPN3-210ENST00000561817 DNAH12Q6ZR08 3092 aa6.94□□□□□ -1.3
CAPN3-210ENST00000561817 SMIM28A0A1B0GU29 152 aa6.94□□□□□ -1.3
CAPN3-210ENST00000561817 FAM170AA1A519 330 aa6.94□□□□□ -1.3
CAPN3-210ENST00000561817 PTGESO14684 152 aa6.94□□□□□ -1.3
CAPN3-210ENST00000561817 THAP12O43422 761 aa6.94□□□□□ -1.3
CAPN3-210ENST00000561817 MAN1A2O60476 641 aa6.94□□□□□ -1.3
CAPN3-210ENST00000561817 CABYRO75952 493 aa6.94□□□□□ -1.3
CAPN3-210ENST00000561817 LSM8O95777 96 aaKnown RBP6.94□□□□□ -1.3
CAPN3-210ENST00000561817 RPLP2P05387 115 aaKnown RBP6.94□□□□□ -1.3
CAPN3-210ENST00000561817 PAEPP09466 180 aa6.94□□□□□ -1.3
CAPN3-210ENST00000561817 MYBL1P10243 752 aa6.94□□□□□ -1.3
CAPN3-210ENST00000561817 CD58P19256 250 aa6.94□□□□□ -1.3
CAPN3-210ENST00000561817 CYP3A5P20815 502 aa6.94□□□□□ -1.3
CAPN3-210ENST00000561817 MMP8P22894 467 aa6.94□□□□□ -1.3
CAPN3-210ENST00000561817 PAX3P23760 479 aa6.94□□□□□ -1.3
CAPN3-210ENST00000561817 RRM1P23921 792 aa6.94□□□□□ -1.3
CAPN3-210ENST00000561817 AKAP5P24588 427 aa6.94□□□□□ -1.3
CAPN3-210ENST00000561817 ACLYP53396 1101 aa6.94□□□□□ -1.3
CAPN3-210ENST00000561817 NAP1L1P55209 391 aaKnown RBP6.94□□□□□ -1.3
CAPN3-210ENST00000561817 TUBB4BP68371 445 aa6.94□□□□□ -1.3
CAPN3-210ENST00000561817 PTPN11Q06124 597 aaPredicted RBP6.94□□□□□ -1.3
CAPN3-210ENST00000561817 SOX4Q06945 474 aaPredicted RBP6.94□□□□□ -1.3
CAPN3-210ENST00000561817 CKAP4Q07065 602 aaKnown RBP6.94□□□□□ -1.3
CAPN3-210ENST00000561817 PTK7Q13308 1070 aa6.94□□□□□ -1.3
CAPN3-210ENST00000561817 ELOAQ14241 798 aaKnown RBP6.94□□□□□ -1.3
CAPN3-210ENST00000561817 RPS6KA1Q15418 735 aa6.94□□□□□ -1.3
CAPN3-210ENST00000561817 WDR72Q3MJ13 1102 aa6.94□□□□□ -1.3
CAPN3-210ENST00000561817 FBXO47Q5MNV8 452 aa6.94□□□□□ -1.3
CAPN3-210ENST00000561817 TEX35Q5T0J7 233 aa6.94□□□□□ -1.3
CAPN3-210ENST00000561817 C6orf118Q5T5N4 469 aa6.94□□□□□ -1.3
CAPN3-210ENST00000561817 C9orf57Q5W0N0 161 aa6.94□□□□□ -1.3
CAPN3-210ENST00000561817 PLEKHA7Q6IQ23 1121 aa6.94□□□□□ -1.3
CAPN3-210ENST00000561817 LLGL2Q6P1M3 1020 aa6.94□□□□□ -1.3
CAPN3-210ENST00000561817 DENND1BQ6P3S1 775 aa6.94□□□□□ -1.3
CAPN3-210ENST00000561817 SCARA5Q6ZMJ2 495 aa6.94□□□□□ -1.3
CAPN3-210ENST00000561817 MRPL10Q7Z7H8 261 aaKnown RBP6.94□□□□□ -1.3
CAPN3-210ENST00000561817 DAAM2Q86T65 1068 aa6.94□□□□□ -1.3
CAPN3-210ENST00000561817 SYCE1Q8N0S2 351 aa6.94□□□□□ -1.3
CAPN3-210ENST00000561817 LRRC52Q8N7C0 313 aa6.94□□□□□ -1.3
CAPN3-210ENST00000561817 ZSCAN1Q8NBB4 408 aa6.94□□□□□ -1.3
CAPN3-210ENST00000561817 PCSK9Q8NBP7 692 aaKnown RBP6.94□□□□□ -1.3
CAPN3-210ENST00000561817 GSTCDQ8NEC7 633 aa6.94□□□□□ -1.3
CAPN3-210ENST00000561817 SPATA4Q8NEY3 305 aa6.94□□□□□ -1.3
CAPN3-210ENST00000561817 ACTRT1Q8TDG2 376 aa6.94□□□□□ -1.3
CAPN3-210ENST00000561817 ALG3Q92685 438 aa6.94□□□□□ -1.3
CAPN3-210ENST00000561817 ARMC5Q96C12 935 aa6.94□□□□□ -1.3
CAPN3-210ENST00000561817 ZNF653Q96CK0 615 aa6.94□□□□□ -1.3
CAPN3-210ENST00000561817 ZNF333Q96JL9 665 aa6.94□□□□□ -1.3
CAPN3-210ENST00000561817 PBKQ96KB5 322 aa6.94□□□□□ -1.3
CAPN3-210ENST00000561817 RPGRIP1Q96KN7 1286 aa6.94□□□□□ -1.3
CAPN3-210ENST00000561817 DEFB118Q96PH6 123 aa6.94□□□□□ -1.3
CAPN3-210ENST00000561817 PPP1R10Q96QC0 940 aaKnown RBP6.94□□□□□ -1.3
CAPN3-210ENST00000561817 UCN2Q96RP3 112 aa6.94□□□□□ -1.3
CAPN3-210ENST00000561817 RPS6KC1Q96S38 1066 aa6.94□□□□□ -1.3
CAPN3-210ENST00000561817 PNKPQ96T60 521 aa6.94□□□□□ -1.3
CAPN3-210ENST00000561817 PSMB7Q99436 277 aa6.94□□□□□ -1.3
CAPN3-210ENST00000561817 TSEN34Q9BSV6 310 aaKnown RBP6.94□□□□□ -1.3
CAPN3-210ENST00000561817 NUP85Q9BW27 656 aa6.94□□□□□ -1.3
CAPN3-210ENST00000561817 PARD6BQ9BYG5 372 aa6.94□□□□□ -1.3
CAPN3-210ENST00000561817 TRIM7Q9C029 511 aa6.94□□□□□ -1.3
CAPN3-210ENST00000561817 LHX5Q9H2C1 402 aa6.94□□□□□ -1.3
CAPN3-210ENST00000561817 ALG2Q9H553 416 aa6.94□□□□□ -1.3
CAPN3-210ENST00000561817 HMX1Q9NP08 348 aaPredicted RBP6.94□□□□□ -1.3
CAPN3-210ENST00000561817 CHST12Q9NRB3 414 aa6.94□□□□□ -1.3
CAPN3-210ENST00000561817 ZNF446Q9NWS9 450 aa6.94□□□□□ -1.3
CAPN3-210ENST00000561817 CNOT8Q9UFF9 292 aaKnown RBP6.94□□□□□ -1.3
CAPN3-210ENST00000561817 PRKAG2Q9UGJ0 569 aa6.94□□□□□ -1.3
CAPN3-210ENST00000561817 CYTH4Q9UIA0 394 aa6.94□□□□□ -1.3
CAPN3-210ENST00000561817 TTC7AQ9ULT0 858 aaPredicted RBP6.94□□□□□ -1.3
CAPN3-210ENST00000561817 ST3GAL5Q9UNP4 418 aa6.94□□□□□ -1.3
CAPN3-210ENST00000561817 MAP4K5Q9Y4K4 846 aa6.94□□□□□ -1.3
CAPN3-210ENST00000561817 ALG6Q9Y672 507 aa6.94□□□□□ -1.3
CAPN3-210ENST00000561817 RPS6KL1Q9Y6S9 549 aa6.94□□□□□ -1.3
CAPN3-210ENST00000561817 SOBPA7XYQ1 873 aa6.93□□□□□ -1.3
CAPN3-210ENST00000561817 MEIS3P2A8K0S8 358 aa6.93□□□□□ -1.3
CAPN3-210ENST00000561817 O00370 1275 aa6.93□□□□□ -1.3
CAPN3-210ENST00000561817 SCAMP3O14828 347 aaKnown RBP6.93□□□□□ -1.3
CAPN3-210ENST00000561817 MGEA5O60502 916 aa6.93□□□□□ -1.3
CAPN3-210ENST00000561817 ZNF623O75123 536 aa6.93□□□□□ -1.3
CAPN3-210ENST00000561817 ZRANB2O95218 330 aaKnown RBP eCLIP6.93□□□□□ -1.3
CAPN3-210ENST00000561817 PFKMP08237 780 aa6.93□□□□□ -1.3
CAPN3-210ENST00000561817 KRT19P08727 400 aa6.93□□□□□ -1.3
CAPN3-210ENST00000561817 ATF7P17544 494 aaPredicted RBP6.93□□□□□ -1.3
CAPN3-210ENST00000561817 COMTP21964 271 aa6.93□□□□□ -1.3
CAPN3-210ENST00000561817 IGFBP6P24592 240 aaPredicted RBP6.93□□□□□ -1.3
CAPN3-210ENST00000561817 CTNNA2P26232 953 aa6.93□□□□□ -1.3
CAPN3-210ENST00000561817 LRPAP1P30533 357 aa6.93□□□□□ -1.3
CAPN3-210ENST00000561817 MARCKSL1P49006 195 aa6.93□□□□□ -1.3
CAPN3-210ENST00000561817 GSCP56915 257 aaPredicted RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms