RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 RRM1P23921 792 aa10.89□□□□□ -0.67
USP3-219ENST00000561326 ACAT1P24752 427 aaKnown RBP10.89□□□□□ -0.67
USP3-219ENST00000561326 SLC11A1P49279 550 aa10.89□□□□□ -0.67
USP3-219ENST00000561326 PLCB3Q01970 1234 aa10.89□□□□□ -0.67
USP3-219ENST00000561326 BTG3Q14201 252 aaPredicted RBP10.89□□□□□ -0.67
USP3-219ENST00000561326 FAM171A1Q5VUB5 890 aa10.89□□□□□ -0.67
USP3-219ENST00000561326 PLEKHA7Q6IQ23 1121 aa10.89□□□□□ -0.67
USP3-219ENST00000561326 PSRC1Q6PGN9 363 aaPredicted RBP10.89□□□□□ -0.67
USP3-219ENST00000561326 OTOP2Q7RTS6 562 aa10.89□□□□□ -0.67
USP3-219ENST00000561326 PEX26Q7Z412 305 aa10.89□□□□□ -0.67
USP3-219ENST00000561326 CMTR2Q8IYT2 770 aaKnown RBP10.89□□□□□ -0.67
USP3-219ENST00000561326 DCP1BQ8IZD4 617 aaKnown RBP10.89□□□□□ -0.67
USP3-219ENST00000561326 MYCBPAPQ8TBZ2 947 aa10.89□□□□□ -0.67
USP3-219ENST00000561326 ZNF564Q8TBZ8 553 aaPredicted RBP10.89□□□□□ -0.67
USP3-219ENST00000561326 SLC2A14Q8TDB8 520 aa10.89□□□□□ -0.67
USP3-219ENST00000561326 ARHGEF26Q96DR7 871 aa10.89□□□□□ -0.67
USP3-219ENST00000561326 ZBED2Q9BTP6 218 aa10.89□□□□□ -0.67
USP3-219ENST00000561326 DUSP16Q9BY84 665 aa10.89□□□□□ -0.67
USP3-219ENST00000561326 MTIF3Q9H2K0 278 aaKnown RBP10.89□□□□□ -0.67
USP3-219ENST00000561326 ST7Q9NRC1 585 aa10.89□□□□□ -0.67
USP3-219ENST00000561326 AAASQ9NRG9 546 aa10.89□□□□□ -0.67
USP3-219ENST00000561326 AMFRQ9UKV5 643 aa10.89□□□□□ -0.67
USP3-219ENST00000561326 PTPRSQ13332 1948 aa10.88□□□□□ -0.67
USP3-219ENST00000561326 GRID2IPA4D2P6 1211 aa10.88□□□□□ -0.67
USP3-219ENST00000561326 OR6C75A6NL08 312 aa10.88□□□□□ -0.67
USP3-219ENST00000561326 BUB1BO60566 1050 aaPredicted RBP10.88□□□□□ -0.67
USP3-219ENST00000561326 ATP2C2O75185 946 aa10.88□□□□□ -0.67
USP3-219ENST00000561326 ITGB1P05556 798 aa10.88□□□□□ -0.67
USP3-219ENST00000561326 FAM200BP0CF97 657 aa10.88□□□□□ -0.67
USP3-219ENST00000561326 CCDC130P13994 396 aa10.88□□□□□ -0.67
USP3-219ENST00000561326 PRLRP16471 622 aa10.88□□□□□ -0.67
USP3-219ENST00000561326 LAG3P18627 525 aa10.88□□□□□ -0.67
USP3-219ENST00000561326 IGFBP6P24592 240 aaPredicted RBP10.88□□□□□ -0.67
USP3-219ENST00000561326 ADORA2BP29275 332 aa10.88□□□□□ -0.67
USP3-219ENST00000561326 GABRB2P47870 512 aa10.88□□□□□ -0.67
USP3-219ENST00000561326 PSMC1P62191 440 aaKnown RBP10.88□□□□□ -0.67
USP3-219ENST00000561326 PDE4CQ08493 712 aa10.88□□□□□ -0.67
USP3-219ENST00000561326 PTP4A2Q12974 167 aa10.88□□□□□ -0.67
USP3-219ENST00000561326 PDCLQ13371 301 aa10.88□□□□□ -0.67
USP3-219ENST00000561326 MAMLD1Q13495 774 aa10.88□□□□□ -0.67
USP3-219ENST00000561326 MESDQ14696 234 aa10.88□□□□□ -0.67
USP3-219ENST00000561326 RPS6KA1Q15418 735 aa10.88□□□□□ -0.67
USP3-219ENST00000561326 PKDCCQ504Y2 493 aa10.88□□□□□ -0.67
USP3-219ENST00000561326 MDH1BQ5I0G3 518 aa10.88□□□□□ -0.67
USP3-219ENST00000561326 INTS6LQ5JSJ4 861 aaKnown RBP10.88□□□□□ -0.67
USP3-219ENST00000561326 MEI1Q5TIA1 1274 aa10.88□□□□□ -0.67
USP3-219ENST00000561326 PAPD7Q5XG87 772 aaKnown RBP10.88□□□□□ -0.67
USP3-219ENST00000561326 DNAJC24Q6P3W2 148 aa10.88□□□□□ -0.67
USP3-219ENST00000561326 FAM171BQ6P995 826 aa10.88□□□□□ -0.67
USP3-219ENST00000561326 DCUN1D2Q6PH85 259 aa10.88□□□□□ -0.67
USP3-219ENST00000561326 C4orf50Q6ZRC1 276 aa10.88□□□□□ -0.67
USP3-219ENST00000561326 ZNF365Q70YC5 407 aa10.88□□□□□ -0.67
USP3-219ENST00000561326 SLFN11Q7Z7L1 901 aa10.88□□□□□ -0.67
USP3-219ENST00000561326 ZDHHC17Q8IUH5 632 aa10.88□□□□□ -0.67
USP3-219ENST00000561326 C3orf20Q8ND61 904 aa10.88□□□□□ -0.67
USP3-219ENST00000561326 FEZF2Q8TBJ5 459 aa10.88□□□□□ -0.67
USP3-219ENST00000561326 SLC35F5Q8WV83 523 aa10.88□□□□□ -0.67
USP3-219ENST00000561326 DPF3Q92784 378 aa10.88□□□□□ -0.67
USP3-219ENST00000561326 ZNF689Q96CS4 500 aaPredicted RBP10.88□□□□□ -0.67
USP3-219ENST00000561326 HSFY1Q96LI6 401 aa10.88□□□□□ -0.67
USP3-219ENST00000561326 ZNF558Q96NG5 402 aa10.88□□□□□ -0.67
USP3-219ENST00000561326 YME1L1Q96TA2 773 aa10.88□□□□□ -0.67
USP3-219ENST00000561326 SELENOOQ9BVL4 669 aa10.88□□□□□ -0.67
USP3-219ENST00000561326 UBXN6Q9BZV1 441 aa10.88□□□□□ -0.67
USP3-219ENST00000561326 OSGEPQ9NPF4 335 aa10.88□□□□□ -0.67
USP3-219ENST00000561326 STK39Q9UEW8 545 aa10.88□□□□□ -0.67
USP3-219ENST00000561326 ANAPC7Q9UJX3 599 aa10.88□□□□□ -0.67
USP3-219ENST00000561326 INSL6Q9Y581 213 aa10.88□□□□□ -0.67
USP3-219ENST00000561326 NME7Q9Y5B8 376 aa10.88□□□□□ -0.67
USP3-219ENST00000561326 SAR1BQ9Y6B6 198 aa10.88□□□□□ -0.67
USP3-219ENST00000561326 CAPN6Q9Y6Q1 641 aa10.88□□□□□ -0.67
USP3-219ENST00000561326 FAM170AA1A519 330 aa10.87□□□□□ -0.67
USP3-219ENST00000561326 SIGLEC16A6NMB1 481 aa10.87□□□□□ -0.67
USP3-219ENST00000561326 XPO1O14980 1071 aaKnown RBP10.87□□□□□ -0.67
USP3-219ENST00000561326 ATMINO43313 823 aaPredicted RBP10.87□□□□□ -0.67
USP3-219ENST00000561326 B4GALT3O60512 393 aa10.87□□□□□ -0.67
USP3-219ENST00000561326 KRT3P12035 628 aa10.87□□□□□ -0.67
USP3-219ENST00000561326 NPR3P17342 541 aa10.87□□□□□ -0.67
USP3-219ENST00000561326 DESP17661 470 aa10.87□□□□□ -0.67
USP3-219ENST00000561326 TCP1P17987 556 aaKnown RBP10.87□□□□□ -0.67
USP3-219ENST00000561326 SLC1A1P43005 524 aa10.87□□□□□ -0.67
USP3-219ENST00000561326 GSCP56915 257 aaPredicted RBP10.87□□□□□ -0.67
USP3-219ENST00000561326 DEFB103AP81534 67 aa10.87□□□□□ -0.67
USP3-219ENST00000561326 SMARCB1Q12824 385 aa10.87□□□□□ -0.67
USP3-219ENST00000561326 NFE2Q16621 373 aaPredicted RBP10.87□□□□□ -0.67
USP3-219ENST00000561326 USP41Q3LFD5 358 aa10.87□□□□□ -0.67
USP3-219ENST00000561326 PTPN20Q4JDL3 420 aa10.87□□□□□ -0.67
USP3-219ENST00000561326 KIAA1841Q6NSI8 718 aa10.87□□□□□ -0.67
USP3-219ENST00000561326 C11orf63Q6NUN7 778 aa10.87□□□□□ -0.67
USP3-219ENST00000561326 FAM117BQ6P1L5 589 aa10.87□□□□□ -0.67
USP3-219ENST00000561326 FUT10Q6P4F1 479 aa10.87□□□□□ -0.67
USP3-219ENST00000561326 KCNT2Q6UVM3 1135 aa10.87□□□□□ -0.67
USP3-219ENST00000561326 ANKS3Q6ZW76 656 aa10.87□□□□□ -0.67
USP3-219ENST00000561326 TMEM110Q86TL2 294 aa10.87□□□□□ -0.67
USP3-219ENST00000561326 TTC30AQ86WT1 665 aa10.87□□□□□ -0.67
USP3-219ENST00000561326 CEP57Q86XR8 500 aa10.87□□□□□ -0.67
USP3-219ENST00000561326 FUKQ8N0W3 1084 aa10.87□□□□□ -0.67
USP3-219ENST00000561326 LRRC57Q8N9N7 239 aa10.87□□□□□ -0.67
USP3-219ENST00000561326 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.87□□□□□ -0.67
USP3-219ENST00000561326 PHOSPHO2Q8TCD6 241 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms